RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 RGPD8O14715 1765 aaPredicted RBP26.32■■□□□ 1.8
CCM2-202ENST00000381112 SCAF1Q9H7N4 1312 aaKnown RBP26.29■■□□□ 1.8
CCM2-202ENST00000381112 ZRANB1Q9UGI0 708 aa26.29■■□□□ 1.8
CCM2-202ENST00000381112 PHF8Q9UPP1 1060 aa26.29■■□□□ 1.8
CCM2-202ENST00000381112 ZBED9Q6R2W3 1325 aa26.28■■□□□ 1.8
CCM2-202ENST00000381112 WDR43Q15061 677 aaKnown RBP eCLIP26.28■■□□□ 1.8
CCM2-202ENST00000381112 ADAMTS8Q9UP79 889 aa26.28■■□□□ 1.8
CCM2-202ENST00000381112 BLMP54132 1417 aaPredicted RBP26.27■■□□□ 1.8
CCM2-202ENST00000381112 TTC21AQ8NDW8 1320 aa26.27■■□□□ 1.8
CCM2-202ENST00000381112 COG3Q96JB2 828 aa26.26■■□□□ 1.79
CCM2-202ENST00000381112 DCCP43146 1447 aa26.25■■□□□ 1.79
CCM2-202ENST00000381112 CFAP53Q96M91 514 aa26.25■■□□□ 1.79
CCM2-202ENST00000381112 ESCO1Q5FWF5 840 aa26.24■■□□□ 1.79
CCM2-202ENST00000381112 DMRT2Q9Y5R5 561 aa26.23■■□□□ 1.79
CCM2-202ENST00000381112 ZNF335Q9H4Z2 1342 aaPredicted RBP26.23■■□□□ 1.79
CCM2-202ENST00000381112 OVOS2A0A0J9YW53 1432 aa26.22■■□□□ 1.79
CCM2-202ENST00000381112 OVOS2Q6IE36 1432 aa26.22■■□□□ 1.79
CCM2-202ENST00000381112 AATKQ6ZMQ8 1374 aa26.22■■□□□ 1.79
CCM2-202ENST00000381112 C1orf167Q5SNV9 1468 aa26.21■■□□□ 1.79
CCM2-202ENST00000381112 ATF3P18847 181 aa26.21■■□□□ 1.79
CCM2-202ENST00000381112 ORAI2Q96SN7 254 aa26.2■■□□□ 1.78
CCM2-202ENST00000381112 POLKQ9UBT6 870 aa26.2■■□□□ 1.78
CCM2-202ENST00000381112 LRRC7Q96NW7 1537 aa26.2■■□□□ 1.78
CCM2-202ENST00000381112 PNPLA6Q8IY17 1366 aa26.19■■□□□ 1.78
CCM2-202ENST00000381112 FBLN1P23142 703 aa26.19■■□□□ 1.78
CCM2-202ENST00000381112 USP31Q70CQ4 1352 aa26.19■■□□□ 1.78
CCM2-202ENST00000381112 MST1RQ04912 1400 aa26.18■■□□□ 1.78
CCM2-202ENST00000381112 COL3A1P02461 1466 aaPredicted RBP26.17■■□□□ 1.78
CCM2-202ENST00000381112 CADPS2Q86UW7 1296 aa26.17■■□□□ 1.78
CCM2-202ENST00000381112 SHPRHQ149N8 1683 aa26.17■■□□□ 1.78
CCM2-202ENST00000381112 SMG6Q86US8 1419 aaKnown RBP26.17■■□□□ 1.78
CCM2-202ENST00000381112 MSH6P52701 1360 aa26.17■■□□□ 1.78
CCM2-202ENST00000381112 SENP3-EIF4A1A0A087X0R7 540 aa26.15■■□□□ 1.78
CCM2-202ENST00000381112 PSME1Q06323 249 aa26.14■■□□□ 1.78
CCM2-202ENST00000381112 PIK3C2AO00443 1686 aa26.13■■□□□ 1.77
CCM2-202ENST00000381112 EMILIN1Q9Y6C2 1016 aa26.13■■□□□ 1.77
CCM2-202ENST00000381112 XIRP1Q702N8 1843 aaKnown RBP26.12■■□□□ 1.77
CCM2-202ENST00000381112 FOXO3O43524 673 aa26.11■■□□□ 1.77
CCM2-202ENST00000381112 PAK3O75914 559 aaPredicted RBP26.11■■□□□ 1.77
CCM2-202ENST00000381112 RRS1Q15050 365 aaKnown RBP26.1■■□□□ 1.77
CCM2-202ENST00000381112 CDK12Q9NYV4 1490 aaPredicted RBP26.1■■□□□ 1.77
CCM2-202ENST00000381112 KIF1AQ12756 1690 aa26.09■■□□□ 1.77
CCM2-202ENST00000381112 PPM1GO15355 546 aaPredicted RBP26.09■■□□□ 1.77
CCM2-202ENST00000381112 NLRP6P59044 892 aa26.09■■□□□ 1.77
CCM2-202ENST00000381112 ABTB2Q8N961 1025 aa26.09■■□□□ 1.77
CCM2-202ENST00000381112 DIAPH1O60610 1272 aaKnown RBP26.08■■□□□ 1.77
CCM2-202ENST00000381112 NUDCQ9Y266 331 aa26.08■■□□□ 1.77
CCM2-202ENST00000381112 CCDC146Q8IYE0 955 aa26.08■■□□□ 1.77
CCM2-202ENST00000381112 USP54Q70EL1 1684 aa26.06■■□□□ 1.76
CCM2-202ENST00000381112 U2AF1L5P0DN76 240 aaPredicted RBP26.06■■□□□ 1.76
CCM2-202ENST00000381112 U2AF1Q01081 240 aaKnown RBP eCLIP26.06■■□□□ 1.76
CCM2-202ENST00000381112 MAP2P11137 1827 aaKnown RBP26.06■■□□□ 1.76
CCM2-202ENST00000381112 SALL2Q9Y467 1007 aaPredicted RBP26.05■■□□□ 1.76
CCM2-202ENST00000381112 NUTM2GQ5VZR2 741 aa26.04■■□□□ 1.76
CCM2-202ENST00000381112 XPCQ01831 940 aaPredicted RBP26.03■■□□□ 1.76
CCM2-202ENST00000381112 KRT28Q7Z3Y7 464 aa26.03■■□□□ 1.76
CCM2-202ENST00000381112 U2SURPO15042 1029 aaKnown RBP26.02■■□□□ 1.76
CCM2-202ENST00000381112 RUNDC1Q96C34 613 aa26.02■■□□□ 1.76
CCM2-202ENST00000381112 APAF1O14727 1248 aa26.02■■□□□ 1.76
CCM2-202ENST00000381112 MARF1Q9Y4F3 1742 aaKnown RBP26.02■■□□□ 1.76
CCM2-202ENST00000381112 SOX12O15370 315 aa26.01■■□□□ 1.75
CCM2-202ENST00000381112 IL13P35225 146 aa26.01■■□□□ 1.75
CCM2-202ENST00000381112 MAP3K19Q56UN5 1328 aa26■■□□□ 1.75
CCM2-202ENST00000381112 PDE3BQ13370 1112 aa25.99■■□□□ 1.75
CCM2-202ENST00000381112 TRPM3Q9HCF6 1732 aaPredicted RBP25.98■■□□□ 1.75
CCM2-202ENST00000381112 NGEFQ8N5V2 710 aa25.98■■□□□ 1.75
CCM2-202ENST00000381112 SLAIN2Q9P270 581 aa25.98■■□□□ 1.75
CCM2-202ENST00000381112 NPHP3Q7Z494 1330 aa25.97■■□□□ 1.75
CCM2-202ENST00000381112 ZNF521Q96K83 1311 aa25.97■■□□□ 1.75
CCM2-202ENST00000381112 IQSEC2Q5JU85 1478 aa25.96■■□□□ 1.75
CCM2-202ENST00000381112 BRINP3Q76B58 766 aa25.96■■□□□ 1.75
CCM2-202ENST00000381112 GTF3C3Q9Y5Q9 886 aa25.96■■□□□ 1.75
CCM2-202ENST00000381112 PEAK1Q9H792 1746 aa25.96■■□□□ 1.75
CCM2-202ENST00000381112 SBNO1A3KN83 1393 aa25.96■■□□□ 1.75
CCM2-202ENST00000381112 PLEKHF1Q96S99 279 aa25.96■■□□□ 1.75
CCM2-202ENST00000381112 DDX17Q92841 729 aaKnown RBP25.95■■□□□ 1.74
CCM2-202ENST00000381112 HSP90AB2PQ58FF8 381 aa25.94■■□□□ 1.74
CCM2-202ENST00000381112 FLT4P35916 1363 aa25.94■■□□□ 1.74
CCM2-202ENST00000381112 TCP11L2Q8N4U5 519 aa25.94■■□□□ 1.74
CCM2-202ENST00000381112 KIF24Q5T7B8 1368 aa25.93■■□□□ 1.74
CCM2-202ENST00000381112 FCHSD2O94868 740 aa25.93■■□□□ 1.74
CCM2-202ENST00000381112 EIF4A2Q14240 407 aaKnown RBP25.93■■□□□ 1.74
CCM2-202ENST00000381112 KCNH5Q8NCM2 988 aa25.92■■□□□ 1.74
CCM2-202ENST00000381112 NFAT5O94916 1531 aa25.92■■□□□ 1.74
CCM2-202ENST00000381112 PXDNQ92626 1479 aa25.92■■□□□ 1.74
CCM2-202ENST00000381112 PNNQ9H307 717 aaKnown RBP25.91■■□□□ 1.74
CCM2-202ENST00000381112 USP19O94966 1318 aa25.91■■□□□ 1.74
CCM2-202ENST00000381112 AMPHP49418 695 aa25.91■■□□□ 1.74
CCM2-202ENST00000381112 RSPH6AQ9H0K4 717 aa25.91■■□□□ 1.74
CCM2-202ENST00000381112 LTBP4Q8N2S1 1624 aa25.9■■□□□ 1.74
CCM2-202ENST00000381112 NCBP3Q53F19 620 aaKnown RBP25.9■■□□□ 1.74
CCM2-202ENST00000381112 CDCA7LQ96GN5 454 aa25.9■■□□□ 1.74
CCM2-202ENST00000381112 SLIT3O75094 1523 aa25.9■■□□□ 1.74
CCM2-202ENST00000381112 LMOD2Q6P5Q4 547 aa25.89■■□□□ 1.74
CCM2-202ENST00000381112 ALS2Q96Q42 1657 aa25.89■■□□□ 1.73
CCM2-202ENST00000381112 GCP02774 474 aa25.87■■□□□ 1.73
CCM2-202ENST00000381112 PHF23Q9BUL5 403 aaPredicted RBP25.87■■□□□ 1.73
CCM2-202ENST00000381112 HOXC9P31274 260 aa25.87■■□□□ 1.73
CCM2-202ENST00000381112 RRP7AQ9Y3A4 280 aaKnown RBP25.87■■□□□ 1.73
CCM2-202ENST00000381112 RTL1A6NKG5 1358 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms