RNA–Protein interactions for RNA: ENST00000380751.9

SERF1B-202, Transcript of small EDRK-rich factor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1B, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-202ENST00000380751 ABCA3Q99758 1704 aa25.48■■□□□ 1.67
SERF1B-202ENST00000380751 TULP4Q9NRJ4 1543 aa25.47■■□□□ 1.67
SERF1B-202ENST00000380751 NUDT16Q96DE0 195 aaKnown RBP25.47■■□□□ 1.67
SERF1B-202ENST00000380751 TRPM3Q9HCF6 1732 aaPredicted RBP25.46■■□□□ 1.67
SERF1B-202ENST00000380751 CDK19Q9BWU1 502 aa25.43■■□□□ 1.66
SERF1B-202ENST00000380751 ALS2Q96Q42 1657 aa25.42■■□□□ 1.66
SERF1B-202ENST00000380751 PRDM11Q9NQV5 511 aa25.41■■□□□ 1.66
SERF1B-202ENST00000380751 SPATA31A5Q5VU36 1347 aa25.4■■□□□ 1.66
SERF1B-202ENST00000380751 SPATA31A7Q8IWB4 1347 aa25.4■■□□□ 1.66
SERF1B-202ENST00000380751 FAM182BQ5T319 152 aa25.4■■□□□ 1.66
SERF1B-202ENST00000380751 NRAPQ86VF7 1730 aa25.39■■□□□ 1.65
SERF1B-202ENST00000380751 COL14A1Q05707 1796 aaKnown RBP25.39■■□□□ 1.65
SERF1B-202ENST00000380751 BAG6P46379 1132 aa25.38■■□□□ 1.65
SERF1B-202ENST00000380751 NUTM2GQ5VZR2 741 aa25.38■■□□□ 1.65
SERF1B-202ENST00000380751 CHRNA2Q15822 529 aa25.37■■□□□ 1.65
SERF1B-202ENST00000380751 ATP7BP35670 1465 aa25.36■■□□□ 1.65
SERF1B-202ENST00000380751 KIAA0232Q92628 1395 aa25.35■■□□□ 1.65
SERF1B-202ENST00000380751 ZC3H6P61129 1189 aaKnown RBP25.35■■□□□ 1.65
SERF1B-202ENST00000380751 NBPF8Q3BBV2 869 aa25.35■■□□□ 1.65
SERF1B-202ENST00000380751 CCDC61Q9Y6R9 512 aa25.35■■□□□ 1.65
SERF1B-202ENST00000380751 ACEP12821 1306 aa25.35■■□□□ 1.65
SERF1B-202ENST00000380751 NBPF1Q3BBV0 1214 aa25.34■■□□□ 1.65
SERF1B-202ENST00000380751 EN1Q05925 392 aaPredicted RBP25.33■■□□□ 1.65
SERF1B-202ENST00000380751 ARHGEF28Q8N1W1 1705 aaKnown RBP25.33■■□□□ 1.65
SERF1B-202ENST00000380751 STRN4Q9NRL3 753 aa25.33■■□□□ 1.65
SERF1B-202ENST00000380751 PLEKHG3A1L390 1219 aa25.31■■□□□ 1.64
SERF1B-202ENST00000380751 PSDA5PKW4 1024 aaPredicted RBP25.31■■□□□ 1.64
SERF1B-202ENST00000380751 SPATA31A1Q5TZJ5 1347 aa25.31■■□□□ 1.64
SERF1B-202ENST00000380751 CRYBG1Q9Y4K1 1723 aa25.3■■□□□ 1.64
SERF1B-202ENST00000380751 POLR3AO14802 1390 aaPredicted RBP25.3■■□□□ 1.64
SERF1B-202ENST00000380751 ABTB2Q8N961 1025 aa25.28■■□□□ 1.64
SERF1B-202ENST00000380751 USP35Q9P2H5 1018 aa25.28■■□□□ 1.64
SERF1B-202ENST00000380751 EVA1CP58658 441 aa25.27■■□□□ 1.64
SERF1B-202ENST00000380751 ITSN1Q15811 1721 aa25.26■■□□□ 1.63
SERF1B-202ENST00000380751 SRPK2P78362 688 aaKnown RBP25.25■■□□□ 1.63
SERF1B-202ENST00000380751 CABP2Q9NPB3 220 aa25.24■■□□□ 1.63
SERF1B-202ENST00000380751 TRIM37O94972 964 aa25.23■■□□□ 1.63
SERF1B-202ENST00000380751 EZH2Q15910 746 aaKnown RBP25.23■■□□□ 1.63
SERF1B-202ENST00000380751 THSD7AQ9UPZ6 1657 aa25.23■■□□□ 1.63
SERF1B-202ENST00000380751 FAM196AQ6ZSG2 479 aa25.22■■□□□ 1.63
SERF1B-202ENST00000380751 LARP1Q6PKG0 1096 aaKnown RBP25.21■■□□□ 1.63
SERF1B-202ENST00000380751 PHRF1Q9P1Y6 1649 aaKnown RBP25.21■■□□□ 1.63
SERF1B-202ENST00000380751 CENPJQ9HC77 1338 aaPredicted RBP25.2■■□□□ 1.62
SERF1B-202ENST00000380751 R3HDM1Q15032 1099 aaKnown RBP25.2■■□□□ 1.62
SERF1B-202ENST00000380751 BARGINQ6ZT62 677 aa25.2■■□□□ 1.62
SERF1B-202ENST00000380751 NLRP13Q86W25 1043 aa25.2■■□□□ 1.62
SERF1B-202ENST00000380751 GCP02774 474 aa25.19■■□□□ 1.62
SERF1B-202ENST00000380751 KIAA1210Q9ULL0 1709 aa25.19■■□□□ 1.62
SERF1B-202ENST00000380751 SSH2Q76I76 1423 aa25.19■■□□□ 1.62
SERF1B-202ENST00000380751 TOPAZ1Q8N9V7 1692 aa25.18■■□□□ 1.62
SERF1B-202ENST00000380751 PDE3BQ13370 1112 aa25.18■■□□□ 1.62
SERF1B-202ENST00000380751 CAMKK2Q96RR4 588 aa25.18■■□□□ 1.62
SERF1B-202ENST00000380751 PPIP5K1Q6PFW1 1433 aa25.18■■□□□ 1.62
SERF1B-202ENST00000380751 USP19O94966 1318 aa25.17■■□□□ 1.62
SERF1B-202ENST00000380751 CAMTA1Q9Y6Y1 1673 aa25.17■■□□□ 1.62
SERF1B-202ENST00000380751 APBA3O96018 575 aa25.17■■□□□ 1.62
SERF1B-202ENST00000380751 RGPD1P0DJD0 1748 aa25.17■■□□□ 1.62
SERF1B-202ENST00000380751 DISP2A7MBM2 1401 aa25.16■■□□□ 1.62
SERF1B-202ENST00000380751 TCP11L2Q8N4U5 519 aa25.16■■□□□ 1.62
SERF1B-202ENST00000380751 CABP1Q9NZU7 370 aa25.16■■□□□ 1.62
SERF1B-202ENST00000380751 CPDO75976 1380 aa25.16■■□□□ 1.62
SERF1B-202ENST00000380751 L3MBTL2Q969R5 705 aa25.14■■□□□ 1.62
SERF1B-202ENST00000380751 LRP5O75197 1615 aa25.14■■□□□ 1.61
SERF1B-202ENST00000380751 NRKQ7Z2Y5 1582 aa25.13■■□□□ 1.61
SERF1B-202ENST00000380751 ZBTB7CA1YPR0 619 aa25.12■■□□□ 1.61
SERF1B-202ENST00000380751 NLRP6P59044 892 aa25.11■■□□□ 1.61
SERF1B-202ENST00000380751 THRAP3Q9Y2W1 955 aaKnown RBP25.11■■□□□ 1.61
SERF1B-202ENST00000380751 TNS1Q9HBL0 1735 aaKnown RBP25.1■■□□□ 1.61
SERF1B-202ENST00000380751 SIN3AQ96ST3 1273 aa25.09■■□□□ 1.61
SERF1B-202ENST00000380751 BRD4O60885 1362 aaPredicted RBP25.08■■□□□ 1.61
SERF1B-202ENST00000380751 LMO7Q8WWI1 1683 aa25.07■■□□□ 1.6
SERF1B-202ENST00000380751 USP6P35125 1406 aa25.06■■□□□ 1.6
SERF1B-202ENST00000380751 COL5A2P05997 1499 aaPredicted RBP25.05■■□□□ 1.6
SERF1B-202ENST00000380751 EVC2Q86UK5 1308 aa25.04■■□□□ 1.6
SERF1B-202ENST00000380751 PARD3Q8TEW0 1356 aa25.04■■□□□ 1.6
SERF1B-202ENST00000380751 NEUROD1Q13562 356 aa25.03■■□□□ 1.6
SERF1B-202ENST00000380751 QRICH2Q9H0J4 1663 aa25.02■■□□□ 1.6
SERF1B-202ENST00000380751 AATKQ6ZMQ8 1374 aa25.02■■□□□ 1.6
SERF1B-202ENST00000380751 CRB1P82279 1406 aa25.02■■□□□ 1.6
SERF1B-202ENST00000380751 AXIN2Q9Y2T1 843 aa25.01■■□□□ 1.59
SERF1B-202ENST00000380751 NBPF14Q5TI25 921 aa25■■□□□ 1.59
SERF1B-202ENST00000380751 TOM1L2Q6ZVM7 507 aa25■■□□□ 1.59
SERF1B-202ENST00000380751 ZNF692Q9BU19 519 aaPredicted RBP25■■□□□ 1.59
SERF1B-202ENST00000380751 TTC21BQ7Z4L5 1316 aa24.98■■□□□ 1.59
SERF1B-202ENST00000380751 C11orf95C9JLR9 678 aaPredicted RBP24.97■■□□□ 1.59
SERF1B-202ENST00000380751 DDB1Q16531 1140 aa24.97■■□□□ 1.59
SERF1B-202ENST00000380751 SLIT3O75094 1523 aa24.96■■□□□ 1.59
SERF1B-202ENST00000380751 ROCK2O75116 1388 aaKnown RBP24.96■■□□□ 1.59
SERF1B-202ENST00000380751 SOX12O15370 315 aa24.96■■□□□ 1.59
SERF1B-202ENST00000380751 ARHGEF25Q86VW2 580 aa24.96■■□□□ 1.59
SERF1B-202ENST00000380751 KCNH5Q8NCM2 988 aa24.94■■□□□ 1.58
SERF1B-202ENST00000380751 WDR17Q8IZU2 1322 aa24.93■■□□□ 1.58
SERF1B-202ENST00000380751 PARP4Q9UKK3 1724 aaKnown RBP24.93■■□□□ 1.58
SERF1B-202ENST00000380751 OVOS2A0A0G2JMS6 1433 aa24.92■■□□□ 1.58
SERF1B-202ENST00000380751 OVOS2A0A0J9YW53 1432 aa24.92■■□□□ 1.58
SERF1B-202ENST00000380751 OVOS2Q6IE36 1432 aa24.92■■□□□ 1.58
SERF1B-202ENST00000380751 PIK3C2AO00443 1686 aa24.91■■□□□ 1.58
SERF1B-202ENST00000380751 TRPM1Q7Z4N2 1603 aa24.91■■□□□ 1.58
SERF1B-202ENST00000380751 PTF1AQ7RTS3 328 aa24.91■■□□□ 1.58
SERF1B-202ENST00000380751 RREB1Q92766 1687 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms