RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 AMOTQ4VCS5 1084 aa8.62□□□□□ -1.03
CCDC171-201ENST00000380701 JMYQ8N9B5 988 aa8.62□□□□□ -1.03
CCDC171-201ENST00000380701 SYNJ1O43426 1573 aa8.62□□□□□ -1.03
CCDC171-201ENST00000380701 TEX14Q8IWB6 1497 aa8.61□□□□□ -1.03
CCDC171-201ENST00000380701 TXLNBQ8N3L3 684 aa8.61□□□□□ -1.03
CCDC171-201ENST00000380701 CCDC61Q9Y6R9 512 aa8.61□□□□□ -1.03
CCDC171-201ENST00000380701 ABCA10Q8WWZ4 1543 aa8.61□□□□□ -1.03
CCDC171-201ENST00000380701 ANKRD1Q15327 319 aa8.61□□□□□ -1.03
CCDC171-201ENST00000380701 PCMTD1Q96MG8 357 aaPredicted RBP8.61□□□□□ -1.03
CCDC171-201ENST00000380701 PLB1Q6P1J6 1458 aa8.61□□□□□ -1.03
CCDC171-201ENST00000380701 GNAI2P04899 355 aa8.61□□□□□ -1.03
CCDC171-201ENST00000380701 CCDC173Q0VFZ6 552 aa8.61□□□□□ -1.03
CCDC171-201ENST00000380701 WDR63Q8IWG1 891 aa8.61□□□□□ -1.03
CCDC171-201ENST00000380701 CNNM1Q9NRU3 951 aa8.61□□□□□ -1.03
CCDC171-201ENST00000380701 COG6Q9Y2V7 657 aa8.61□□□□□ -1.03
CCDC171-201ENST00000380701 IKQ13123 557 aaPredicted RBP8.61□□□□□ -1.03
CCDC171-201ENST00000380701 CFAP70Q5T0N1 1121 aa8.61□□□□□ -1.03
CCDC171-201ENST00000380701 FSD1Q9BTV5 496 aa8.61□□□□□ -1.03
CCDC171-201ENST00000380701 CDK19Q9BWU1 502 aa8.61□□□□□ -1.03
CCDC171-201ENST00000380701 STRN4Q9NRL3 753 aa8.61□□□□□ -1.03
CCDC171-201ENST00000380701 CTNNA3Q9UI47 895 aa8.61□□□□□ -1.03
CCDC171-201ENST00000380701 PRXQ9BXM0 1461 aa8.6□□□□□ -1.03
CCDC171-201ENST00000380701 IL27Q8NEV9 243 aa8.6□□□□□ -1.03
CCDC171-201ENST00000380701 TEX13AQ9BXU3 409 aaPredicted RBP8.6□□□□□ -1.03
CCDC171-201ENST00000380701 MYO6Q9UM54 1294 aa8.6□□□□□ -1.03
CCDC171-201ENST00000380701 TOP2BQ02880 1626 aa8.6□□□□□ -1.03
CCDC171-201ENST00000380701 ODF2Q5BJF6 829 aa8.6□□□□□ -1.03
CCDC171-201ENST00000380701 ZNF644Q9H582 1327 aaPredicted RBP8.6□□□□□ -1.03
CCDC171-201ENST00000380701 MTHFSP49914 203 aa8.6□□□□□ -1.03
CCDC171-201ENST00000380701 HDGFL1Q5TGJ6 251 aa8.6□□□□□ -1.03
CCDC171-201ENST00000380701 LETM1O95202 739 aaPredicted RBP8.6□□□□□ -1.03
CCDC171-201ENST00000380701 PDE3AQ14432 1141 aa8.6□□□□□ -1.03
CCDC171-201ENST00000380701 DDX49Q9Y6V7 483 aaKnown RBP8.6□□□□□ -1.03
CCDC171-201ENST00000380701 CT47A1Q5JQC4 288 aaPredicted RBP8.6□□□□□ -1.03
CCDC171-201ENST00000380701 MPHOSPH8Q99549 860 aa8.6□□□□□ -1.03
CCDC171-201ENST00000380701 CHMP5Q9NZZ3 219 aa8.6□□□□□ -1.03
CCDC171-201ENST00000380701 BICD2Q8TD16 824 aa8.59□□□□□ -1.03
CCDC171-201ENST00000380701 FCHSD2O94868 740 aa8.59□□□□□ -1.03
CCDC171-201ENST00000380701 TRIM21P19474 475 aaKnown RBP8.59□□□□□ -1.03
CCDC171-201ENST00000380701 OLFM4Q6UX06 510 aa8.59□□□□□ -1.03
CCDC171-201ENST00000380701 NOL8Q76FK4 1167 aaKnown RBP8.59□□□□□ -1.03
CCDC171-201ENST00000380701 RUSC2Q8N2Y8 1516 aa8.59□□□□□ -1.03
CCDC171-201ENST00000380701 ERBINQ96RT1 1412 aa8.59□□□□□ -1.03
CCDC171-201ENST00000380701 AIMP1Q12904 312 aaKnown RBP8.59□□□□□ -1.03
CCDC171-201ENST00000380701 SLF2Q8IX21 1173 aa8.59□□□□□ -1.03
CCDC171-201ENST00000380701 TTC39AQ5SRH9 613 aa8.59□□□□□ -1.03
CCDC171-201ENST00000380701 TRIM22Q8IYM9 498 aa8.59□□□□□ -1.03
CCDC171-201ENST00000380701 PRKAR2BP31323 418 aa8.59□□□□□ -1.03
CCDC171-201ENST00000380701 DENND4BO75064 1496 aaPredicted RBP8.59□□□□□ -1.04
CCDC171-201ENST00000380701 CDKL5O76039 1030 aa8.58□□□□□ -1.04
CCDC171-201ENST00000380701 HMOX1P09601 288 aa8.58□□□□□ -1.04
CCDC171-201ENST00000380701 CCDC57Q2TAC2 916 aa8.58□□□□□ -1.04
CCDC171-201ENST00000380701 ZNF396Q96N95 335 aaPredicted RBP8.58□□□□□ -1.04
CCDC171-201ENST00000380701 IGHMBP2P38935 993 aaKnown RBP8.58□□□□□ -1.04
CCDC171-201ENST00000380701 TWISTNBQ3B726 338 aaPredicted RBP8.58□□□□□ -1.04
CCDC171-201ENST00000380701 SASS6Q6UVJ0 657 aa8.58□□□□□ -1.04
CCDC171-201ENST00000380701 ACBD3Q9H3P7 528 aa8.58□□□□□ -1.04
CCDC171-201ENST00000380701 EPS15P42566 896 aa8.58□□□□□ -1.04
CCDC171-201ENST00000380701 TMEM132EQ6IEE7 984 aa8.58□□□□□ -1.04
CCDC171-201ENST00000380701 CDK5RAP3Q96JB5 506 aa8.58□□□□□ -1.04
CCDC171-201ENST00000380701 SURF6O75683 361 aaKnown RBP8.58□□□□□ -1.04
CCDC171-201ENST00000380701 LUC7LQ9NQ29 371 aaKnown RBP8.58□□□□□ -1.04
CCDC171-201ENST00000380701 ABCC11Q96J66 1382 aa8.58□□□□□ -1.04
CCDC171-201ENST00000380701 OFD1O75665 1012 aa8.58□□□□□ -1.04
CCDC171-201ENST00000380701 CADPS2Q86UW7 1296 aa8.58□□□□□ -1.04
CCDC171-201ENST00000380701 TCP11L2Q8N4U5 519 aa8.58□□□□□ -1.04
CCDC171-201ENST00000380701 BCL2L13Q9BXK5 485 aa8.58□□□□□ -1.04
CCDC171-201ENST00000380701 A0A087WZG4 1122 aa8.57□□□□□ -1.04
CCDC171-201ENST00000380701 CUL7Q14999 1698 aa8.57□□□□□ -1.04
CCDC171-201ENST00000380701 DESP17661 470 aa8.57□□□□□ -1.04
CCDC171-201ENST00000380701 IQGAP2Q13576 1575 aa8.57□□□□□ -1.04
CCDC171-201ENST00000380701 KRT32Q14532 448 aa8.57□□□□□ -1.04
CCDC171-201ENST00000380701 RBM19Q9Y4C8 960 aaKnown RBP8.57□□□□□ -1.04
CCDC171-201ENST00000380701 CCP110O43303 1012 aa8.57□□□□□ -1.04
CCDC171-201ENST00000380701 SOGA3Q5TF21 947 aa8.57□□□□□ -1.04
CCDC171-201ENST00000380701 CEP126Q9P2H0 1117 aa8.57□□□□□ -1.04
CCDC171-201ENST00000380701 AKAP2Q9Y2D5 859 aa8.57□□□□□ -1.04
CCDC171-201ENST00000380701 WASF1Q92558 559 aa8.57□□□□□ -1.04
CCDC171-201ENST00000380701 NOL7Q9UMY1 257 aaKnown RBP8.56□□□□□ -1.04
CCDC171-201ENST00000380701 ADGRL1O94910 1474 aa8.56□□□□□ -1.04
CCDC171-201ENST00000380701 PPP2R1AP30153 589 aa8.56□□□□□ -1.04
CCDC171-201ENST00000380701 CRBNQ96SW2 442 aa8.56□□□□□ -1.04
CCDC171-201ENST00000380701 DACH1Q9UI36 760 aa8.56□□□□□ -1.04
CCDC171-201ENST00000380701 NSD2O96028 1365 aa8.56□□□□□ -1.04
CCDC171-201ENST00000380701 NUTM2BA6NNL0 878 aaPredicted RBP8.56□□□□□ -1.04
CCDC171-201ENST00000380701 NUTM2EB1AL46 878 aaPredicted RBP8.56□□□□□ -1.04
CCDC171-201ENST00000380701 NUTM2AQ8IVF1 878 aaPredicted RBP8.56□□□□□ -1.04
CCDC171-201ENST00000380701 MBD3O95983 291 aa8.55□□□□□ -1.04
CCDC171-201ENST00000380701 AEBP1Q8IUX7 1158 aa8.55□□□□□ -1.04
CCDC171-201ENST00000380701 FILIP1LQ4L180 1135 aa8.55□□□□□ -1.04
CCDC171-201ENST00000380701 NECTIN2Q92692 538 aa8.55□□□□□ -1.04
CCDC171-201ENST00000380701 CABP1Q9NZU7 370 aa8.55□□□□□ -1.04
CCDC171-201ENST00000380701 PDE4AP27815 886 aa8.55□□□□□ -1.04
CCDC171-201ENST00000380701 SUPT6HQ7KZ85 1726 aaKnown RBP8.55□□□□□ -1.04
CCDC171-201ENST00000380701 STIM1Q13586 685 aa8.55□□□□□ -1.04
CCDC171-201ENST00000380701 RABEP1Q15276 862 aa8.55□□□□□ -1.04
CCDC171-201ENST00000380701 TMEM132AQ24JP5 1023 aa8.55□□□□□ -1.04
CCDC171-201ENST00000380701 PPP4R3BQ5MIZ7 849 aa8.55□□□□□ -1.04
CCDC171-201ENST00000380701 ATF7IPQ6VMQ6 1270 aa8.55□□□□□ -1.04
CCDC171-201ENST00000380701 TOM1O60784 492 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms