RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 DUSP27Q5VZP5 1158 aa8.14□□□□□ -1.11
RIPK1-202ENST00000380409 CERS3Q8IU89 383 aa8.14□□□□□ -1.11
RIPK1-202ENST00000380409 TRMT2AQ8IZ69 625 aaKnown RBP8.14□□□□□ -1.11
RIPK1-202ENST00000380409 CARD10Q9BWT7 1032 aa8.14□□□□□ -1.11
RIPK1-202ENST00000380409 SNX21Q969T3 373 aa8.13□□□□□ -1.11
RIPK1-202ENST00000380409 NOP2P46087 812 aaKnown RBP8.13□□□□□ -1.11
RIPK1-202ENST00000380409 CEBPAP49715 358 aaPredicted RBP8.13□□□□□ -1.11
RIPK1-202ENST00000380409 FAM193AP78312 1265 aa8.13□□□□□ -1.11
RIPK1-202ENST00000380409 TSPYL1Q9H0U9 437 aa8.13□□□□□ -1.11
RIPK1-202ENST00000380409 OGFRQ9NZT2 677 aa8.13□□□□□ -1.11
RIPK1-202ENST00000380409 EHBP1L1Q8N3D4 1523 aa8.13□□□□□ -1.11
RIPK1-202ENST00000380409 KDM5DQ9BY66 1539 aa8.13□□□□□ -1.11
RIPK1-202ENST00000380409 TRPM1Q7Z4N2 1603 aa8.13□□□□□ -1.11
RIPK1-202ENST00000380409 PLEKHH1Q9ULM0 1364 aa8.12□□□□□ -1.11
RIPK1-202ENST00000380409 TIGD1Q96MW7 591 aa8.12□□□□□ -1.11
RIPK1-202ENST00000380409 FEZ2Q9UHY8 353 aaPredicted RBP8.12□□□□□ -1.11
RIPK1-202ENST00000380409 TSC1Q92574 1164 aa8.12□□□□□ -1.11
RIPK1-202ENST00000380409 RBSNQ9H1K0 784 aa8.12□□□□□ -1.11
RIPK1-202ENST00000380409 FKBP5Q13451 457 aaPredicted RBP8.12□□□□□ -1.11
RIPK1-202ENST00000380409 FAM43BQ6ZT52 329 aaPredicted RBP8.12□□□□□ -1.11
RIPK1-202ENST00000380409 TERF2Q15554 542 aa8.11□□□□□ -1.11
RIPK1-202ENST00000380409 KNSTRNQ9Y448 316 aa8.11□□□□□ -1.11
RIPK1-202ENST00000380409 CFAP74Q9C0B2 1584 aa8.11□□□□□ -1.11
RIPK1-202ENST00000380409 CAMSAP2Q08AD1 1489 aa8.11□□□□□ -1.11
RIPK1-202ENST00000380409 SAFB2Q14151 953 aaKnown RBP eCLIP8.11□□□□□ -1.11
RIPK1-202ENST00000380409 SYCP1Q15431 976 aa8.11□□□□□ -1.11
RIPK1-202ENST00000380409 U2AF2P26368 475 aaKnown RBP eCLIP8.11□□□□□ -1.117e-7■□□□□ 8.5
RIPK1-202ENST00000380409 CCDC39Q9UFE4 941 aa8.11□□□□□ -1.11
RIPK1-202ENST00000380409 CTNNA3Q9UI47 895 aa8.11□□□□□ -1.11
RIPK1-202ENST00000380409 MORC2Q9Y6X9 1032 aaPredicted RBP8.11□□□□□ -1.11
RIPK1-202ENST00000380409 CLTCL1P53675 1640 aa8.11□□□□□ -1.11
RIPK1-202ENST00000380409 SYNMO15061 1565 aa8.11□□□□□ -1.11
RIPK1-202ENST00000380409 EFCAB2Q5VUJ9 269 aa8.1□□□□□ -1.11
RIPK1-202ENST00000380409 PIBF1Q8WXW3 757 aa8.1□□□□□ -1.11
RIPK1-202ENST00000380409 KIF3AQ9Y496 699 aa8.1□□□□□ -1.11
RIPK1-202ENST00000380409 ATP10BO94823 1461 aa8.1□□□□□ -1.11
RIPK1-202ENST00000380409 CCDC66A2RUB6 948 aa8.1□□□□□ -1.11
RIPK1-202ENST00000380409 ZNF526Q8TF50 670 aaPredicted RBP8.1□□□□□ -1.11
RIPK1-202ENST00000380409 DDX41Q9UJV9 622 aaKnown RBP8.1□□□□□ -1.11
RIPK1-202ENST00000380409 SPDYE4A6NLX3 237 aa8.1□□□□□ -1.11
RIPK1-202ENST00000380409 PRR29P0C7W0 189 aa8.1□□□□□ -1.11
RIPK1-202ENST00000380409 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.1□□□□□ -1.11
RIPK1-202ENST00000380409 TRIM6-TRIM34B2RNG4 842 aa8.09□□□□□ -1.11
RIPK1-202ENST00000380409 HSPA2P54652 639 aa8.09□□□□□ -1.11
RIPK1-202ENST00000380409 MAPK8IP2Q13387 824 aaPredicted RBP8.09□□□□□ -1.11
RIPK1-202ENST00000380409 PDCL2Q8N4E4 241 aa8.09□□□□□ -1.11
RIPK1-202ENST00000380409 NFATC2IPQ8NCF5 419 aa8.09□□□□□ -1.11
RIPK1-202ENST00000380409 CHMP4CQ96CF2 233 aa8.09□□□□□ -1.11
RIPK1-202ENST00000380409 TRIM34Q9BYJ4 488 aa8.09□□□□□ -1.11
RIPK1-202ENST00000380409 KIAA0556O60303 1618 aa8.09□□□□□ -1.11
RIPK1-202ENST00000380409 MAGI3Q5TCQ9 1506 aa8.09□□□□□ -1.11
RIPK1-202ENST00000380409 NKTRP30414 1462 aaKnown RBP8.09□□□□□ -1.11
RIPK1-202ENST00000380409 NLRP13Q86W25 1043 aa8.09□□□□□ -1.11
RIPK1-202ENST00000380409 ADCY10Q96PN6 1610 aa8.09□□□□□ -1.11
RIPK1-202ENST00000380409 DNMT1P26358 1616 aaKnown RBP8.09□□□□□ -1.11
RIPK1-202ENST00000380409 CREBRFQ8IUR6 639 aa8.09□□□□□ -1.11
RIPK1-202ENST00000380409 ADGBQ8N7X0 1667 aa8.09□□□□□ -1.11
RIPK1-202ENST00000380409 PZPP20742 1482 aa8.09□□□□□ -1.12
RIPK1-202ENST00000380409 MFAP1P55081 439 aaKnown RBP8.08□□□□□ -1.12
RIPK1-202ENST00000380409 TSGA10IPQ3SY00 556 aa8.08□□□□□ -1.12
RIPK1-202ENST00000380409 SCAF11Q99590 1463 aaKnown RBP8.08□□□□□ -1.12
RIPK1-202ENST00000380409 BRPF1P55201 1214 aaPredicted RBP8.08□□□□□ -1.12
RIPK1-202ENST00000380409 KIAA2012Q0VF49 1180 aa8.08□□□□□ -1.12
RIPK1-202ENST00000380409 ZSCAN23Q3MJ62 389 aa8.08□□□□□ -1.12
RIPK1-202ENST00000380409 GBP4Q96PP9 640 aa8.08□□□□□ -1.12
RIPK1-202ENST00000380409 PUS7Q96PZ0 661 aaKnown RBP8.08□□□□□ -1.12
RIPK1-202ENST00000380409 CYP2E1P05181 493 aaPredicted RBP8.08□□□□□ -1.12
RIPK1-202ENST00000380409 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.08□□□□□ -1.12
RIPK1-202ENST00000380409 ZNF771Q7L3S4 317 aaPredicted RBP8.07□□□□□ -1.12
RIPK1-202ENST00000380409 CROCC2H7BZ55 1655 aa8.07□□□□□ -1.12
RIPK1-202ENST00000380409 EGFL6Q8IUX8 553 aa8.07□□□□□ -1.12
RIPK1-202ENST00000380409 CEP120Q8N960 986 aa8.07□□□□□ -1.12
RIPK1-202ENST00000380409 ABCC10Q5T3U5 1492 aa8.07□□□□□ -1.12
RIPK1-202ENST00000380409 CALCOCO1Q9P1Z2 691 aa8.07□□□□□ -1.12
RIPK1-202ENST00000380409 CGNL1Q0VF96 1302 aa8.07□□□□□ -1.12
RIPK1-202ENST00000380409 REREQ9P2R6 1566 aa8.07□□□□□ -1.12
RIPK1-202ENST00000380409 PPRC1Q5VV67 1664 aaKnown RBP8.06□□□□□ -1.12
RIPK1-202ENST00000380409 KIF2CQ99661 725 aa8.06□□□□□ -1.12
RIPK1-202ENST00000380409 UPF2Q9HAU5 1272 aaKnown RBP8.06□□□□□ -1.12
RIPK1-202ENST00000380409 NCBP1Q09161 790 aaKnown RBP8.06□□□□□ -1.12
RIPK1-202ENST00000380409 NUP153P49790 1475 aaKnown RBP8.06□□□□□ -1.12
RIPK1-202ENST00000380409 MYOM1P52179 1685 aa8.06□□□□□ -1.12
RIPK1-202ENST00000380409 PER1O15534 1290 aaPredicted RBP8.06□□□□□ -1.12
RIPK1-202ENST00000380409 CT47A1Q5JQC4 288 aaPredicted RBP8.06□□□□□ -1.12
RIPK1-202ENST00000380409 ATG3Q9NT62 314 aa8.06□□□□□ -1.12
RIPK1-202ENST00000380409 NUP155O75694 1391 aa8.06□□□□□ -1.12
RIPK1-202ENST00000380409 ANKRD30AQ9BXX3 1397 aa8.06□□□□□ -1.12
RIPK1-202ENST00000380409 COL17A1Q9UMD9 1497 aaPredicted RBP8.06□□□□□ -1.12
RIPK1-202ENST00000380409 WDR7Q9Y4E6 1490 aa8.06□□□□□ -1.12
RIPK1-202ENST00000380409 ZNF428Q96B54 188 aa8.05□□□□□ -1.12
RIPK1-202ENST00000380409 ZBTB9Q96C00 473 aa8.05□□□□□ -1.12
RIPK1-202ENST00000380409 ST20-MTHFSA0A0A6YYL1 179 aa8.05□□□□□ -1.12
RIPK1-202ENST00000380409 PRIM1P49642 420 aaKnown RBP8.05□□□□□ -1.12
RIPK1-202ENST00000380409 AEBP1Q8IUX7 1158 aa8.05□□□□□ -1.12
RIPK1-202ENST00000380409 C22orf23Q9BZE7 217 aa8.05□□□□□ -1.12
RIPK1-202ENST00000380409 HMGB1P09429 215 aaKnown RBP8.05□□□□□ -1.12
RIPK1-202ENST00000380409 CWC22Q9HCG8 908 aaKnown RBP8.05□□□□□ -1.12
RIPK1-202ENST00000380409 LMBRD1Q9NUN5 540 aa8.05□□□□□ -1.12
RIPK1-202ENST00000380409 LOC102724159A0A0B4J2E5 919 aa8.04□□□□□ -1.12
RIPK1-202ENST00000380409 PWP2Q15269 919 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms