RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 FAM98CQ17RN3 349 aaKnown RBP33.74■■■□□ 2.99
U2AF1-202ENST00000380276 STAC3Q96MF2 364 aa33.74■■■□□ 2.99
U2AF1-202ENST00000380276 COL14A1Q05707 1796 aaKnown RBP33.73■■■□□ 2.99
U2AF1-202ENST00000380276 ONECUT3O60422 494 aaPredicted RBP33.72■■■□□ 2.99
U2AF1-202ENST00000380276 ARHGEF28Q8N1W1 1705 aaKnown RBP33.72■■■□□ 2.99
U2AF1-202ENST00000380276 ITSN1Q15811 1721 aa33.69■■■□□ 2.98
U2AF1-202ENST00000380276 NUDT16Q96DE0 195 aaKnown RBP33.67■■■□□ 2.98
U2AF1-202ENST00000380276 PRDM11Q9NQV5 511 aa33.67■■■□□ 2.98
U2AF1-202ENST00000380276 ATP7BP35670 1465 aa33.64■■■□□ 2.98
U2AF1-202ENST00000380276 CRYBG1Q9Y4K1 1723 aa33.63■■■□□ 2.97
U2AF1-202ENST00000380276 HRCP23327 699 aa33.63■■■□□ 2.97
U2AF1-202ENST00000380276 BAG6P46379 1132 aa33.62■■■□□ 2.97
U2AF1-202ENST00000380276 CDK19Q9BWU1 502 aa33.61■■■□□ 2.97
U2AF1-202ENST00000380276 NUTM2GQ5VZR2 741 aa33.6■■■□□ 2.97
U2AF1-202ENST00000380276 SPATA31A5Q5VU36 1347 aa33.59■■■□□ 2.97
U2AF1-202ENST00000380276 SPATA31A7Q8IWB4 1347 aa33.59■■■□□ 2.97
U2AF1-202ENST00000380276 SRCAPQ6ZRS2 3230 aa33.58■■■□□ 2.97
U2AF1-202ENST00000380276 FAM182BQ5T319 152 aa33.58■■■□□ 2.97
U2AF1-202ENST00000380276 KIAA0232Q92628 1395 aa33.58■■■□□ 2.97
U2AF1-202ENST00000380276 CHRNA2Q15822 529 aa33.57■■■□□ 2.96
U2AF1-202ENST00000380276 STRN4Q9NRL3 753 aa33.57■■■□□ 2.96
U2AF1-202ENST00000380276 PHRF1Q9P1Y6 1649 aaKnown RBP33.56■■■□□ 2.96
U2AF1-202ENST00000380276 ZC3H6P61129 1189 aaKnown RBP33.55■■■□□ 2.96
U2AF1-202ENST00000380276 ACEP12821 1306 aa33.53■■■□□ 2.96
U2AF1-202ENST00000380276 PSDA5PKW4 1024 aaPredicted RBP33.52■■■□□ 2.96
U2AF1-202ENST00000380276 RGPD1P0DJD0 1748 aa33.51■■■□□ 2.96
U2AF1-202ENST00000380276 TOPAZ1Q8N9V7 1692 aa33.51■■■□□ 2.95
U2AF1-202ENST00000380276 KIAA1210Q9ULL0 1709 aa33.5■■■□□ 2.95
U2AF1-202ENST00000380276 CCDC61Q9Y6R9 512 aa33.5■■■□□ 2.95
U2AF1-202ENST00000380276 THSD7AQ9UPZ6 1657 aa33.49■■■□□ 2.95
U2AF1-202ENST00000380276 EN1Q05925 392 aaPredicted RBP33.49■■■□□ 2.95
U2AF1-202ENST00000380276 NBPF8Q3BBV2 869 aa33.49■■■□□ 2.95
U2AF1-202ENST00000380276 USP35Q9P2H5 1018 aa33.48■■■□□ 2.95
U2AF1-202ENST00000380276 SPATA31A1Q5TZJ5 1347 aa33.48■■■□□ 2.95
U2AF1-202ENST00000380276 POLR3AO14802 1390 aaPredicted RBP33.47■■■□□ 2.95
U2AF1-202ENST00000380276 EVA1CP58658 441 aa33.47■■■□□ 2.95
U2AF1-202ENST00000380276 SRPK2P78362 688 aaKnown RBP33.46■■■□□ 2.95
U2AF1-202ENST00000380276 NBPF1Q3BBV0 1214 aa33.46■■■□□ 2.95
U2AF1-202ENST00000380276 ABTB2Q8N961 1025 aa33.46■■■□□ 2.95
U2AF1-202ENST00000380276 PLEKHG3A1L390 1219 aa33.42■■■□□ 2.94
U2AF1-202ENST00000380276 NRKQ7Z2Y5 1582 aa33.4■■■□□ 2.94
U2AF1-202ENST00000380276 LRP5O75197 1615 aa33.39■■■□□ 2.94
U2AF1-202ENST00000380276 PPIP5K1Q6PFW1 1433 aa33.39■■■□□ 2.94
U2AF1-202ENST00000380276 CENPJQ9HC77 1338 aaPredicted RBP33.39■■■□□ 2.94
U2AF1-202ENST00000380276 TNS1Q9HBL0 1735 aaKnown RBP33.39■■■□□ 2.94
U2AF1-202ENST00000380276 CABP2Q9NPB3 220 aa33.38■■■□□ 2.93
U2AF1-202ENST00000380276 SSH2Q76I76 1423 aa33.37■■■□□ 2.93
U2AF1-202ENST00000380276 TRIM37O94972 964 aa33.37■■■□□ 2.93
U2AF1-202ENST00000380276 ZBTB7CA1YPR0 619 aa33.36■■■□□ 2.93
U2AF1-202ENST00000380276 FAM196AQ6ZSG2 479 aa33.36■■■□□ 2.93
U2AF1-202ENST00000380276 PDE3BQ13370 1112 aa33.35■■■□□ 2.93
U2AF1-202ENST00000380276 QRICH2Q9H0J4 1663 aa33.34■■■□□ 2.93
U2AF1-202ENST00000380276 R3HDM1Q15032 1099 aaKnown RBP33.34■■■□□ 2.93
U2AF1-202ENST00000380276 EZH2Q15910 746 aaKnown RBP33.34■■■□□ 2.93
U2AF1-202ENST00000380276 NLRP13Q86W25 1043 aa33.34■■■□□ 2.93
U2AF1-202ENST00000380276 LARP1Q6PKG0 1096 aaKnown RBP33.33■■■□□ 2.93
U2AF1-202ENST00000380276 CAMTA1Q9Y6Y1 1673 aa33.33■■■□□ 2.93
U2AF1-202ENST00000380276 USP19O94966 1318 aa33.31■■■□□ 2.92
U2AF1-202ENST00000380276 DISP2A7MBM2 1401 aa33.31■■■□□ 2.92
U2AF1-202ENST00000380276 APBA3O96018 575 aa33.3■■■□□ 2.92
U2AF1-202ENST00000380276 CPDO75976 1380 aa33.3■■■□□ 2.92
U2AF1-202ENST00000380276 GCP02774 474 aa33.29■■■□□ 2.92
U2AF1-202ENST00000380276 BARGINQ6ZT62 677 aa33.29■■■□□ 2.92
U2AF1-202ENST00000380276 TCP11L2Q8N4U5 519 aa33.29■■■□□ 2.92
U2AF1-202ENST00000380276 LMO7Q8WWI1 1683 aa33.28■■■□□ 2.92
U2AF1-202ENST00000380276 CABP1Q9NZU7 370 aa33.26■■■□□ 2.91
U2AF1-202ENST00000380276 NLRP6P59044 892 aa33.23■■■□□ 2.91
U2AF1-202ENST00000380276 CAMKK2Q96RR4 588 aa33.23■■■□□ 2.91
U2AF1-202ENST00000380276 L3MBTL2Q969R5 705 aa33.22■■■□□ 2.91
U2AF1-202ENST00000380276 USP6P35125 1406 aa33.21■■■□□ 2.91
U2AF1-202ENST00000380276 THRAP3Q9Y2W1 955 aaKnown RBP33.21■■■□□ 2.91
U2AF1-202ENST00000380276 BRD4O60885 1362 aaPredicted RBP33.21■■■□□ 2.91
U2AF1-202ENST00000380276 COL5A2P05997 1499 aaPredicted RBP33.2■■■□□ 2.91
U2AF1-202ENST00000380276 EVC2Q86UK5 1308 aa33.18■■■□□ 2.9
U2AF1-202ENST00000380276 PARD3Q8TEW0 1356 aa33.17■■■□□ 2.9
U2AF1-202ENST00000380276 CRB1P82279 1406 aa33.16■■■□□ 2.9
U2AF1-202ENST00000380276 NEUROD1Q13562 356 aa33.15■■■□□ 2.9
U2AF1-202ENST00000380276 SIN3AQ96ST3 1273 aa33.15■■■□□ 2.9
U2AF1-202ENST00000380276 TRPM1Q7Z4N2 1603 aa33.14■■■□□ 2.9
U2AF1-202ENST00000380276 PARP4Q9UKK3 1724 aaKnown RBP33.14■■■□□ 2.89
U2AF1-202ENST00000380276 SLIT3O75094 1523 aa33.12■■■□□ 2.89
U2AF1-202ENST00000380276 ROCK2O75116 1388 aaKnown RBP33.12■■■□□ 2.89
U2AF1-202ENST00000380276 TOM1L2Q6ZVM7 507 aa33.12■■■□□ 2.89
U2AF1-202ENST00000380276 RREB1Q92766 1687 aa33.12■■■□□ 2.89
U2AF1-202ENST00000380276 PIK3C2AO00443 1686 aa33.11■■■□□ 2.89
U2AF1-202ENST00000380276 SOX12O15370 315 aa33.11■■■□□ 2.89
U2AF1-202ENST00000380276 NBPF14Q5TI25 921 aa33.11■■■□□ 2.89
U2AF1-202ENST00000380276 AATKQ6ZMQ8 1374 aa33.1■■■□□ 2.89
U2AF1-202ENST00000380276 NUP188Q5SRE5 1749 aa33.09■■■□□ 2.89
U2AF1-202ENST00000380276 OVOS2A0A0G2JMS6 1433 aa33.06■■■□□ 2.88
U2AF1-202ENST00000380276 OVOS2A0A0J9YW53 1432 aa33.06■■■□□ 2.88
U2AF1-202ENST00000380276 OVOS2Q6IE36 1432 aa33.06■■■□□ 2.88
U2AF1-202ENST00000380276 DDB1Q16531 1140 aa33.06■■■□□ 2.88
U2AF1-202ENST00000380276 LRRC37A3O60309 1634 aa33.04■■■□□ 2.88
U2AF1-202ENST00000380276 C11orf95C9JLR9 678 aaPredicted RBP33.04■■■□□ 2.88
U2AF1-202ENST00000380276 TTC21BQ7Z4L5 1316 aa33.03■■■□□ 2.88
U2AF1-202ENST00000380276 CSB-PGBD3P0DP91 1061 aa33.03■■■□□ 2.88
U2AF1-202ENST00000380276 ZNF692Q9BU19 519 aaPredicted RBP33.03■■■□□ 2.88
U2AF1-202ENST00000380276 CPSF1Q10570 1443 aaKnown RBP33.02■■■□□ 2.88
U2AF1-202ENST00000380276 AKAP12Q02952 1782 aa33.01■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms