RNA–Protein interactions for RNA: ENST00000380151.3

CDKN2A-203, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best)

Gene CDKN2A, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-203ENST00000380151 SRPK2P78362 688 aaKnown RBP34.15■■■■□ 3.06
CDKN2A-203ENST00000380151 RALGAPBQ86X10 1494 aa34.14■■■■□ 3.06
CDKN2A-203ENST00000380151 ACEP12821 1306 aa34.14■■■■□ 3.06
CDKN2A-203ENST00000380151 GLI3P10071 1580 aa34.14■■■■□ 3.06
CDKN2A-203ENST00000380151 NWD2Q9ULI1 1742 aa34.13■■■■□ 3.05
CDKN2A-203ENST00000380151 CRYBG1Q9Y4K1 1723 aa34.13■■■■□ 3.05
CDKN2A-203ENST00000380151 CABP2Q9NPB3 220 aa34.12■■■■□ 3.05
CDKN2A-203ENST00000380151 FAM83GA6ND36 823 aa34.11■■■■□ 3.05
CDKN2A-203ENST00000380151 PLEKHG3A1L390 1219 aa34.1■■■■□ 3.05
CDKN2A-203ENST00000380151 NBPF8Q3BBV2 869 aa34.1■■■■□ 3.05
CDKN2A-203ENST00000380151 PPIP5K1Q6PFW1 1433 aa34.1■■■■□ 3.05
CDKN2A-203ENST00000380151 ATAD2Q6PL18 1390 aa34.1■■■■□ 3.05
CDKN2A-203ENST00000380151 VPS72Q15906 364 aa34.06■■■■□ 3.04
CDKN2A-203ENST00000380151 TONSLQ96HA7 1378 aa34.06■■■■□ 3.04
CDKN2A-203ENST00000380151 COL14A1Q05707 1796 aaKnown RBP34.05■■■■□ 3.04
CDKN2A-203ENST00000380151 NRAPQ86VF7 1730 aa34.04■■■■□ 3.04
CDKN2A-203ENST00000380151 NUTM2GQ5VZR2 741 aa34.04■■■■□ 3.04
CDKN2A-203ENST00000380151 CCDC9Q9Y3X0 531 aaKnown RBP34.04■■■■□ 3.04
CDKN2A-203ENST00000380151 PHRF1Q9P1Y6 1649 aaKnown RBP34.04■■■■□ 3.04
CDKN2A-203ENST00000380151 BTG4Q9NY30 223 aa34.01■■■■□ 3.03
CDKN2A-203ENST00000380151 EVC2Q86UK5 1308 aa34.01■■■■□ 3.03
CDKN2A-203ENST00000380151 PRDM11Q9NQV5 511 aa33.99■■■■□ 3.03
CDKN2A-203ENST00000380151 CABP1Q9NZU7 370 aa33.97■■■■□ 3.03
CDKN2A-203ENST00000380151 KIAA0232Q92628 1395 aa33.97■■■■□ 3.03
CDKN2A-203ENST00000380151 ABTB2Q8N961 1025 aa33.95■■■■□ 3.03
CDKN2A-203ENST00000380151 EP400Q96L91 3159 aa33.95■■■■□ 3.02
CDKN2A-203ENST00000380151 CARD11Q9BXL7 1154 aa33.94■■■■□ 3.02
CDKN2A-203ENST00000380151 NRKQ7Z2Y5 1582 aa33.94■■■■□ 3.02
CDKN2A-203ENST00000380151 SEPT12Q8IYM1 358 aa33.93■■■■□ 3.02
CDKN2A-203ENST00000380151 USP6P35125 1406 aa33.93■■■■□ 3.02
CDKN2A-203ENST00000380151 BRWD3Q6RI45 1802 aa33.91■■■■□ 3.02
CDKN2A-203ENST00000380151 ZC3H6P61129 1189 aaKnown RBP33.91■■■■□ 3.02
CDKN2A-203ENST00000380151 CHRNA2Q15822 529 aa33.91■■■■□ 3.02
CDKN2A-203ENST00000380151 USP19O94966 1318 aa33.9■■■■□ 3.02
CDKN2A-203ENST00000380151 BRD4O60885 1362 aaPredicted RBP33.88■■■■□ 3.01
CDKN2A-203ENST00000380151 SBNO2Q9Y2G9 1366 aa33.86■■■■□ 3.01
CDKN2A-203ENST00000380151 A0A0G2JS52 829 aa33.86■■■■□ 3.01
CDKN2A-203ENST00000380151 ONECUT3O60422 494 aaPredicted RBP33.86■■■■□ 3.01
CDKN2A-203ENST00000380151 MYT1Q01538 1121 aa33.86■■■■□ 3.01
CDKN2A-203ENST00000380151 FAM98CQ17RN3 349 aaKnown RBP33.86■■■■□ 3.01
CDKN2A-203ENST00000380151 NLRP13Q86W25 1043 aa33.84■■■■□ 3.01
CDKN2A-203ENST00000380151 SPATA31A5Q5VU36 1347 aa33.83■■■■□ 3.01
CDKN2A-203ENST00000380151 SPATA31A7Q8IWB4 1347 aa33.83■■■■□ 3.01
CDKN2A-203ENST00000380151 SSH2Q76I76 1423 aa33.82■■■■□ 3
CDKN2A-203ENST00000380151 STRN4Q9NRL3 753 aa33.81■■■■□ 3
CDKN2A-203ENST00000380151 CPDO75976 1380 aa33.81■■■■□ 3
CDKN2A-203ENST00000380151 PIK3C2AO00443 1686 aa33.8■■■■□ 3
CDKN2A-203ENST00000380151 GCP02774 474 aa33.79■■■■□ 3
CDKN2A-203ENST00000380151 KRT27Q7Z3Y8 459 aa33.79■■■■□ 3
CDKN2A-203ENST00000380151 AKAP12Q02952 1782 aa33.78■■■■□ 3
CDKN2A-203ENST00000380151 NLRP6P59044 892 aa33.78■■■■□ 3
CDKN2A-203ENST00000380151 LMO7Q8WWI1 1683 aa33.77■■■■□ 3
CDKN2A-203ENST00000380151 SLIT3O75094 1523 aa33.76■■■■□ 3
CDKN2A-203ENST00000380151 CCDC125Q86Z20 511 aa33.76■■■□□ 2.99
CDKN2A-203ENST00000380151 CAMTA1Q9Y6Y1 1673 aa33.76■■■□□ 2.99
CDKN2A-203ENST00000380151 THSD7AQ9UPZ6 1657 aa33.75■■■□□ 2.99
CDKN2A-203ENST00000380151 BLMP54132 1417 aaPredicted RBP33.75■■■□□ 2.99
CDKN2A-203ENST00000380151 SPATA31A1Q5TZJ5 1347 aa33.75■■■□□ 2.99
CDKN2A-203ENST00000380151 CPSF1Q10570 1443 aaKnown RBP33.74■■■□□ 2.99
CDKN2A-203ENST00000380151 TTC21BQ7Z4L5 1316 aa33.74■■■□□ 2.99
CDKN2A-203ENST00000380151 ZNF692Q9BU19 519 aaPredicted RBP33.73■■■□□ 2.99
CDKN2A-203ENST00000380151 ZBTB7CA1YPR0 619 aa33.71■■■□□ 2.99
CDKN2A-203ENST00000380151 EVA1CP58658 441 aa33.71■■■□□ 2.99
CDKN2A-203ENST00000380151 KTN1Q86UP2 1357 aaKnown RBP33.71■■■□□ 2.99
CDKN2A-203ENST00000380151 USP35Q9P2H5 1018 aa33.69■■■□□ 2.98
CDKN2A-203ENST00000380151 MON2Q7Z3U7 1717 aa33.69■■■□□ 2.98
CDKN2A-203ENST00000380151 LARP1Q6PKG0 1096 aaKnown RBP33.68■■■□□ 2.98
CDKN2A-203ENST00000380151 TTC21AQ8NDW8 1320 aa33.67■■■□□ 2.98
CDKN2A-203ENST00000380151 COL5A2P05997 1499 aaPredicted RBP33.67■■■□□ 2.98
CDKN2A-203ENST00000380151 CD163L1Q9NR16 1453 aa33.66■■■□□ 2.98
CDKN2A-203ENST00000380151 TMC1Q8TDI8 760 aa33.65■■■□□ 2.98
CDKN2A-203ENST00000380151 ST20-MTHFSA0A0A6YYL1 179 aa33.63■■■□□ 2.97
CDKN2A-203ENST00000380151 SF3B2Q13435 895 aaKnown RBP33.63■■■□□ 2.97
CDKN2A-203ENST00000380151 FAM182BQ5T319 152 aa33.63■■■□□ 2.97
CDKN2A-203ENST00000380151 AATKQ6ZMQ8 1374 aa33.62■■■□□ 2.97
CDKN2A-203ENST00000380151 DEFB132Q7Z7B7 95 aa33.62■■■□□ 2.97
CDKN2A-203ENST00000380151 TESK2Q96S53 571 aa33.62■■■□□ 2.97
CDKN2A-203ENST00000380151 SOX12O15370 315 aa33.61■■■□□ 2.97
CDKN2A-203ENST00000380151 PCGF6Q9BYE7 350 aa33.61■■■□□ 2.97
CDKN2A-203ENST00000380151 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.6■■■□□ 2.97
CDKN2A-203ENST00000380151 SLC12A5Q9H2X9 1139 aa33.6■■■□□ 2.97
CDKN2A-203ENST00000380151 BARGINQ6ZT62 677 aa33.58■■■□□ 2.97
CDKN2A-203ENST00000380151 TCP11L2Q8N4U5 519 aa33.58■■■□□ 2.97
CDKN2A-203ENST00000380151 HDGFL2Q7Z4V5 671 aaPredicted RBP33.57■■■□□ 2.96
CDKN2A-203ENST00000380151 KCNH5Q8NCM2 988 aa33.57■■■□□ 2.96
CDKN2A-203ENST00000380151 NFAT5O94916 1531 aa33.57■■■□□ 2.96
CDKN2A-203ENST00000380151 COL18A1P39060 1754 aa33.57■■■□□ 2.96
CDKN2A-203ENST00000380151 ZRANB1Q9UGI0 708 aa33.56■■■□□ 2.96
CDKN2A-203ENST00000380151 USP47Q96K76 1375 aa33.56■■■□□ 2.96
CDKN2A-203ENST00000380151 CRB1P82279 1406 aa33.55■■■□□ 2.96
CDKN2A-203ENST00000380151 PUS7Q96PZ0 661 aaKnown RBP33.55■■■□□ 2.96
CDKN2A-203ENST00000380151 A0A1W2PP64 1363 aa33.55■■■□□ 2.96
CDKN2A-203ENST00000380151 ARHGEF25Q86VW2 580 aa33.54■■■□□ 2.96
CDKN2A-203ENST00000380151 NME9Q86XW9 330 aa33.54■■■□□ 2.96
CDKN2A-203ENST00000380151 EDC4Q6P2E9 1401 aaKnown RBP33.53■■■□□ 2.96
CDKN2A-203ENST00000380151 USP31Q70CQ4 1352 aa33.52■■■□□ 2.96
CDKN2A-203ENST00000380151 TERF2IPQ9NYB0 399 aa33.52■■■□□ 2.96
CDKN2A-203ENST00000380151 AXIN2Q9Y2T1 843 aa33.52■■■□□ 2.96
CDKN2A-203ENST00000380151 THRAP3Q9Y2W1 955 aaKnown RBP33.51■■■□□ 2.95
CDKN2A-203ENST00000380151 USP54Q70EL1 1684 aa33.51■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms