RNA–Protein interactions for RNA: ENST00000379540.7

NFX1-203, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFX1, Length 4,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-203ENST00000379540 SENP3-EIF4A1A0A087X0R7 540 aa9.14□□□□□ -0.95
NFX1-203ENST00000379540 CPLX1O14810 134 aa9.14□□□□□ -0.95
NFX1-203ENST00000379540 CT47B1P0C2W7 299 aaPredicted RBP9.14□□□□□ -0.95
NFX1-203ENST00000379540 LAMC1P11047 1609 aa9.14□□□□□ -0.95
NFX1-203ENST00000379540 DZIP1LQ8IYY4 767 aaKnown RBP9.14□□□□□ -0.95
NFX1-203ENST00000379540 GOLGA6L3A6NEY3 463 aa9.14□□□□□ -0.95
NFX1-203ENST00000379540 IPO7O95373 1038 aaKnown RBP9.14□□□□□ -0.95
NFX1-203ENST00000379540 RIPK4P57078 832 aa9.14□□□□□ -0.95
NFX1-203ENST00000379540 CCDC146Q8IYE0 955 aa9.14□□□□□ -0.95
NFX1-203ENST00000379540 CLUAP1Q96AJ1 413 aa9.14□□□□□ -0.95
NFX1-203ENST00000379540 HIP1O00291 1037 aa9.13□□□□□ -0.95
NFX1-203ENST00000379540 SAFBQ15424 915 aaKnown RBP eCLIP9.13□□□□□ -0.95
NFX1-203ENST00000379540 ZNF518AQ6AHZ1 1483 aa9.13□□□□□ -0.95
NFX1-203ENST00000379540 NUTM2FA1L443 756 aa9.13□□□□□ -0.95
NFX1-203ENST00000379540 TET3O43151 1660 aa9.13□□□□□ -0.95
NFX1-203ENST00000379540 TRPM1Q7Z4N2 1603 aa9.13□□□□□ -0.95
NFX1-203ENST00000379540 VPS53Q5VIR6 699 aa9.13□□□□□ -0.95
NFX1-203ENST00000379540 A2MP01023 1474 aa9.13□□□□□ -0.95
NFX1-203ENST00000379540 XBP1P17861 261 aa9.12□□□□□ -0.95
NFX1-203ENST00000379540 ANKRD45Q5TZF3 282 aa9.12□□□□□ -0.95
NFX1-203ENST00000379540 PLA2R1Q13018 1463 aa9.12□□□□□ -0.95
NFX1-203ENST00000379540 DHX29Q7Z478 1369 aaKnown RBP9.12□□□□□ -0.95
NFX1-203ENST00000379540 GOLGA6L19H0YKK7 550 aa9.12□□□□□ -0.95
NFX1-203ENST00000379540 FKBP5Q13451 457 aaPredicted RBP9.12□□□□□ -0.95
NFX1-203ENST00000379540 TSPYL4Q9UJ04 414 aa9.12□□□□□ -0.95
NFX1-203ENST00000379540 DEPDC5O75140 1603 aa9.12□□□□□ -0.95
NFX1-203ENST00000379540 BRD4O60885 1362 aaPredicted RBP9.12□□□□□ -0.95
NFX1-203ENST00000379540 TRPM2O94759 1503 aa9.12□□□□□ -0.95
NFX1-203ENST00000379540 TXNDC2Q86VQ3 553 aa9.12□□□□□ -0.95
NFX1-203ENST00000379540 ERC1Q8IUD2 1116 aa9.12□□□□□ -0.95
NFX1-203ENST00000379540 IPO9Q96P70 1041 aaKnown RBP9.12□□□□□ -0.95
NFX1-203ENST00000379540 PROSER2Q86WR7 435 aaPredicted RBP9.11□□□□□ -0.95
NFX1-203ENST00000379540 PPP6R1Q9UPN7 881 aa9.11□□□□□ -0.95
NFX1-203ENST00000379540 NLRP6P59044 892 aa9.11□□□□□ -0.95
NFX1-203ENST00000379540 CCDC30Q5VVM6 783 aa9.11□□□□□ -0.95
NFX1-203ENST00000379540 INTS3Q68E01 1043 aaKnown RBP9.11□□□□□ -0.95
NFX1-203ENST00000379540 ANKLE2Q86XL3 938 aa9.11□□□□□ -0.95
NFX1-203ENST00000379540 RILPL2Q969X0 211 aa9.11□□□□□ -0.95
NFX1-203ENST00000379540 ZNF428Q96B54 188 aa9.11□□□□□ -0.95
NFX1-203ENST00000379540 NLRP2Q9NX02 1062 aa9.11□□□□□ -0.95
NFX1-203ENST00000379540 CD109Q6YHK3 1445 aa9.11□□□□□ -0.95
NFX1-203ENST00000379540 BRMS1Q9HCU9 246 aa9.11□□□□□ -0.95
NFX1-203ENST00000379540 BCORL1Q5H9F3 1711 aa9.11□□□□□ -0.95
NFX1-203ENST00000379540 NINLQ9Y2I6 1382 aa9.11□□□□□ -0.95
NFX1-203ENST00000379540 BECN2A8MW95 431 aa9.11□□□□□ -0.95
NFX1-203ENST00000379540 SLC3A2P08195 630 aaKnown RBP9.11□□□□□ -0.95
NFX1-203ENST00000379540 RRP1P56182 461 aaKnown RBP9.1□□□□□ -0.95
NFX1-203ENST00000379540 SPHKAPQ2M3C7 1700 aa9.1□□□□□ -0.95
NFX1-203ENST00000379540 APAF1O14727 1248 aa9.1□□□□□ -0.95
NFX1-203ENST00000379540 TATP17735 454 aaPredicted RBP9.1□□□□□ -0.95
NFX1-203ENST00000379540 TBC1D2BQ9UPU7 963 aa9.1□□□□□ -0.95
NFX1-203ENST00000379540 EIF2S2P20042 333 aaKnown RBP9.1□□□□□ -0.95
NFX1-203ENST00000379540 PSMA5P28066 241 aa9.1□□□□□ -0.95
NFX1-203ENST00000379540 DEKP35659 375 aaKnown RBP9.1□□□□□ -0.95
NFX1-203ENST00000379540 NUCB2P80303 420 aa9.1□□□□□ -0.95
NFX1-203ENST00000379540 SF3B2Q13435 895 aaKnown RBP9.1□□□□□ -0.95
NFX1-203ENST00000379540 SART3Q15020 963 aaKnown RBP9.1□□□□□ -0.95
NFX1-203ENST00000379540 RIC3Q7Z5B4 369 aa9.1□□□□□ -0.95
NFX1-203ENST00000379540 RALYLQ86SE5 291 aaKnown RBP9.1□□□□□ -0.95
NFX1-203ENST00000379540 CCDC43Q96MW1 224 aaKnown RBP9.1□□□□□ -0.95
NFX1-203ENST00000379540 ATAD2Q6PL18 1390 aa9.1□□□□□ -0.95
NFX1-203ENST00000379540 CWC22Q9HCG8 908 aaKnown RBP9.09□□□□□ -0.95
NFX1-203ENST00000379540 E9PCH4 1651 aa9.09□□□□□ -0.95
NFX1-203ENST00000379540 GNL3LQ9NVN8 582 aaKnown RBP9.09□□□□□ -0.95
NFX1-203ENST00000379540 PRDM15P57071 1507 aaPredicted RBP9.09□□□□□ -0.95
NFX1-203ENST00000379540 PTPRTO14522 1441 aa9.09□□□□□ -0.95
NFX1-203ENST00000379540 PDIA4P13667 645 aaKnown RBP9.09□□□□□ -0.95
NFX1-203ENST00000379540 RBM19Q9Y4C8 960 aaKnown RBP9.09□□□□□ -0.95
NFX1-203ENST00000379540 A0A0U1RQG5 324 aaPredicted RBP9.09□□□□□ -0.95
NFX1-203ENST00000379540 MCM2P49736 904 aa9.09□□□□□ -0.95
NFX1-203ENST00000379540 DHX8Q14562 1220 aaKnown RBP9.09□□□□□ -0.95
NFX1-203ENST00000379540 GPS2Q13227 327 aa9.08□□□□□ -0.96
NFX1-203ENST00000379540 KIF6Q6ZMV9 814 aa9.08□□□□□ -0.96
NFX1-203ENST00000379540 CEP152O94986 1710 aa9.08□□□□□ -0.96
NFX1-203ENST00000379540 UBTFL1P0CB47 393 aaPredicted RBP9.08□□□□□ -0.96
NFX1-203ENST00000379540 VWDEQ8N2E2 1590 aa9.08□□□□□ -0.96
NFX1-203ENST00000379540 APPP05067 770 aa9.08□□□□□ -0.96
NFX1-203ENST00000379540 CLASRPQ8N2M8 674 aaKnown RBP9.08□□□□□ -0.96
NFX1-203ENST00000379540 SLKQ9H2G2 1235 aaPredicted RBP9.08□□□□□ -0.96
NFX1-203ENST00000379540 SPG7Q9UQ90 795 aa9.08□□□□□ -0.96
NFX1-203ENST00000379540 NEO1Q92859 1461 aa9.08□□□□□ -0.96
NFX1-203ENST00000379540 NEURL4Q96JN8 1562 aa9.08□□□□□ -0.96
NFX1-203ENST00000379540 AMER1Q5JTC6 1135 aaPredicted RBP9.08□□□□□ -0.96
NFX1-203ENST00000379540 SYTL4Q96C24 671 aaPredicted RBP9.08□□□□□ -0.96
NFX1-203ENST00000379540 DHX16O60231 1041 aaKnown RBP9.07□□□□□ -0.96
NFX1-203ENST00000379540 RRP7AQ9Y3A4 280 aaKnown RBP9.07□□□□□ -0.96
NFX1-203ENST00000379540 R3HCC1Q9Y3T6 440 aaKnown RBP9.07□□□□□ -0.96
NFX1-203ENST00000379540 COL17A1Q9UMD9 1497 aaPredicted RBP9.06□□□□□ -0.96
NFX1-203ENST00000379540 MLH3Q9UHC1 1453 aa9.06□□□□□ -0.96
NFX1-203ENST00000379540 PDCP20941 246 aa9.06□□□□□ -0.96
NFX1-203ENST00000379540 ELL2O00472 640 aaPredicted RBP9.06□□□□□ -0.96
NFX1-203ENST00000379540 ABTB2Q8N961 1025 aa9.06□□□□□ -0.96
NFX1-203ENST00000379540 SPRYD3Q8NCJ5 442 aa9.06□□□□□ -0.96
NFX1-203ENST00000379540 HECW2Q9P2P5 1572 aa9.06□□□□□ -0.96
NFX1-203ENST00000379540 RNF17Q9BXT8 1623 aaKnown RBP9.06□□□□□ -0.96
NFX1-203ENST00000379540 RDXP35241 583 aaKnown RBP9.06□□□□□ -0.96
NFX1-203ENST00000379540 PIP4K2AP48426 406 aaPredicted RBP9.06□□□□□ -0.96
NFX1-203ENST00000379540 KIDINS220Q9ULH0 1771 aa9.05□□□□□ -0.96
NFX1-203ENST00000379540 NFXL1Q6ZNB6 911 aa9.05□□□□□ -0.96
NFX1-203ENST00000379540 KCNH5Q8NCM2 988 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms