RNA–Protein interactions for RNA: ENST00000378747.7

OPTN-202, Transcript of optineurin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene OPTN, Length 3,400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-202ENST00000378747 NFKBIBQ15653 356 aa11.48□□□□□ -0.57
OPTN-202ENST00000378747 TRIM35Q9UPQ4 493 aa11.48□□□□□ -0.57
OPTN-202ENST00000378747 PCDHB15Q9Y5E8 787 aa11.48□□□□□ -0.57
OPTN-202ENST00000378747 DLG5Q8TDM6 1919 aa11.48□□□□□ -0.57
OPTN-202ENST00000378747 HDAC1Q13547 482 aaPredicted RBP11.48□□□□□ -0.57
OPTN-202ENST00000378747 TRAK1Q9UPV9 953 aa11.48□□□□□ -0.57
OPTN-202ENST00000378747 A2ML1A8K2U0 1454 aa11.47□□□□□ -0.57
OPTN-202ENST00000378747 NEFMP07197 916 aa11.47□□□□□ -0.57
OPTN-202ENST00000378747 NCOA3Q9Y6Q9 1424 aa11.47□□□□□ -0.57
OPTN-202ENST00000378747 LAS1LQ9Y4W2 734 aaKnown RBP11.47□□□□□ -0.57
OPTN-202ENST00000378747 MAP2P11137 1827 aaKnown RBP11.47□□□□□ -0.57
OPTN-202ENST00000378747 PPP6R1Q9UPN7 881 aa11.46□□□□□ -0.57
OPTN-202ENST00000378747 CDK12Q9NYV4 1490 aaPredicted RBP11.46□□□□□ -0.58
OPTN-202ENST00000378747 PANK1Q8TE04 598 aa11.46□□□□□ -0.58
OPTN-202ENST00000378747 MYH16Q9H6N6 1097 aa11.46□□□□□ -0.58
OPTN-202ENST00000378747 NPM1P06748 294 aaKnown RBP eCLIP11.45□□□□□ -0.58
OPTN-202ENST00000378747 MVPQ14764 893 aaKnown RBP11.45□□□□□ -0.58
OPTN-202ENST00000378747 TBC1D32Q96NH3 1257 aa11.45□□□□□ -0.58
OPTN-202ENST00000378747 USP54Q70EL1 1684 aa11.45□□□□□ -0.58
OPTN-202ENST00000378747 PTCH1Q13635 1447 aa11.45□□□□□ -0.58
OPTN-202ENST00000378747 IDI1Q13907 227 aa11.45□□□□□ -0.58
OPTN-202ENST00000378747 TMEM132EQ6IEE7 984 aa11.45□□□□□ -0.58
OPTN-202ENST00000378747 RIMS1Q86UR5 1692 aaKnown RBP11.45□□□□□ -0.58
OPTN-202ENST00000378747 CFAP53Q96M91 514 aa11.45□□□□□ -0.58
OPTN-202ENST00000378747 ITSN1Q15811 1721 aa11.45□□□□□ -0.58
OPTN-202ENST00000378747 SEC24BO95487 1268 aa11.44□□□□□ -0.58
OPTN-202ENST00000378747 IL27Q8NEV9 243 aa11.44□□□□□ -0.58
OPTN-202ENST00000378747 AATKQ6ZMQ8 1374 aa11.44□□□□□ -0.58
OPTN-202ENST00000378747 N4BP2Q86UW6 1770 aaPredicted RBP11.44□□□□□ -0.58
OPTN-202ENST00000378747 FYB1O15117 783 aa11.43□□□□□ -0.58
OPTN-202ENST00000378747 GSE1Q14687 1217 aa11.43□□□□□ -0.58
OPTN-202ENST00000378747 COG6Q9Y2V7 657 aa11.43□□□□□ -0.58
OPTN-202ENST00000378747 SMC5Q8IY18 1101 aa11.42□□□□□ -0.58
OPTN-202ENST00000378747 TMPOP42166 694 aaKnown RBP11.42□□□□□ -0.58
OPTN-202ENST00000378747 TNNQ9UQP3 1299 aa11.42□□□□□ -0.58
OPTN-202ENST00000378747 EIF5BO60841 1220 aaKnown RBP11.41□□□□□ -0.58
OPTN-202ENST00000378747 ALDH1L2Q3SY69 923 aa11.41□□□□□ -0.58
OPTN-202ENST00000378747 ZNF428Q96B54 188 aa11.41□□□□□ -0.58
OPTN-202ENST00000378747 SIRT1Q96EB6 747 aa11.41□□□□□ -0.58
OPTN-202ENST00000378747 TUBGCP6Q96RT7 1819 aa11.41□□□□□ -0.58
OPTN-202ENST00000378747 DDIT3P35638 169 aa11.41□□□□□ -0.58
OPTN-202ENST00000378747 UBR1Q8IWV7 1749 aa11.41□□□□□ -0.58
OPTN-202ENST00000378747 PDZRN3Q9UPQ7 1066 aa11.4□□□□□ -0.58
OPTN-202ENST00000378747 RWDD1Q9H446 243 aaPredicted RBP11.4□□□□□ -0.58
OPTN-202ENST00000378747 KIF24Q5T7B8 1368 aa11.4□□□□□ -0.58
OPTN-202ENST00000378747 EDC4Q6P2E9 1401 aaKnown RBP11.4□□□□□ -0.58
OPTN-202ENST00000378747 ZKSCAN2Q63HK3 967 aa11.4□□□□□ -0.59
OPTN-202ENST00000378747 ZBTB40Q9NUA8 1239 aa11.39□□□□□ -0.59
OPTN-202ENST00000378747 ZNF853P0CG23 659 aa11.39□□□□□ -0.59
OPTN-202ENST00000378747 CABP2Q9NPB3 220 aa11.39□□□□□ -0.59
OPTN-202ENST00000378747 GGT6Q6P531 493 aa11.38□□□□□ -0.59
OPTN-202ENST00000378747 LRRC37A3O60309 1634 aa11.38□□□□□ -0.59
OPTN-202ENST00000378747 TRIM27P14373 513 aa11.38□□□□□ -0.59
OPTN-202ENST00000378747 AEBP2Q6ZN18 517 aaPredicted RBP11.38□□□□□ -0.59
OPTN-202ENST00000378747 RSPH6AQ9H0K4 717 aa11.38□□□□□ -0.59
OPTN-202ENST00000378747 FCHSD2O94868 740 aa11.38□□□□□ -0.59
OPTN-202ENST00000378747 RAPGEF3O95398 923 aa11.38□□□□□ -0.59
OPTN-202ENST00000378747 DZIP1LQ8IYY4 767 aaKnown RBP11.38□□□□□ -0.59
OPTN-202ENST00000378747 RGS3P49796 1198 aa11.37□□□□□ -0.59
OPTN-202ENST00000378747 ARHGAP45Q92619 1136 aa11.37□□□□□ -0.59
OPTN-202ENST00000378747 RRP7AQ9Y3A4 280 aaKnown RBP11.37□□□□□ -0.59
OPTN-202ENST00000378747 FMN2Q9NZ56 1722 aa11.37□□□□□ -0.59
OPTN-202ENST00000378747 PEAK1Q9H792 1746 aa11.37□□□□□ -0.59
OPTN-202ENST00000378747 ATF7IPQ6VMQ6 1270 aa11.37□□□□□ -0.59
OPTN-202ENST00000378747 TERF2IPQ9NYB0 399 aa11.37□□□□□ -0.59
OPTN-202ENST00000378747 MARF1Q9Y4F3 1742 aaKnown RBP11.36□□□□□ -0.59
OPTN-202ENST00000378747 SSH1Q8WYL5 1049 aa11.36□□□□□ -0.59
OPTN-202ENST00000378747 ZNF692Q9BU19 519 aaPredicted RBP11.36□□□□□ -0.59
OPTN-202ENST00000378747 SLC4A3P48751 1232 aa11.36□□□□□ -0.59
OPTN-202ENST00000378747 FRAT1Q92837 279 aaPredicted RBP11.36□□□□□ -0.59
OPTN-202ENST00000378747 DDX19BQ9UMR2 479 aa11.36□□□□□ -0.59
OPTN-202ENST00000378747 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.36□□□□□ -0.59
OPTN-202ENST00000378747 FAM69CQ0P6D2 419 aa11.35□□□□□ -0.59
OPTN-202ENST00000378747 PNNQ9H307 717 aaKnown RBP11.35□□□□□ -0.59
OPTN-202ENST00000378747 RIMS2Q9UQ26 1411 aa11.35□□□□□ -0.59
OPTN-202ENST00000378747 RBM25P49756 843 aaKnown RBP11.35□□□□□ -0.59
OPTN-202ENST00000378747 FRAT2O75474 233 aaPredicted RBP11.35□□□□□ -0.59
OPTN-202ENST00000378747 NUCB1Q02818 461 aa11.35□□□□□ -0.59
OPTN-202ENST00000378747 KIF16BQ96L93 1317 aa11.34□□□□□ -0.59
OPTN-202ENST00000378747 ABCC4O15439 1325 aa11.34□□□□□ -0.59
OPTN-202ENST00000378747 EXOSC9Q06265 439 aaKnown RBP11.34□□□□□ -0.59
OPTN-202ENST00000378747 TBC1D2Q9BYX2 928 aa11.34□□□□□ -0.59
OPTN-202ENST00000378747 U2AF1L5P0DN76 240 aaPredicted RBP11.34□□□□□ -0.59
OPTN-202ENST00000378747 U2AF1Q01081 240 aaKnown RBP eCLIP11.34□□□□□ -0.59
OPTN-202ENST00000378747 PRAM1Q96QH2 718 aa11.34□□□□□ -0.59
OPTN-202ENST00000378747 RGS12O14924 1447 aa11.33□□□□□ -0.6
OPTN-202ENST00000378747 SSH2Q76I76 1423 aa11.33□□□□□ -0.6
OPTN-202ENST00000378747 POLKQ9UBT6 870 aa11.33□□□□□ -0.6
OPTN-202ENST00000378747 IL13P35225 146 aa11.32□□□□□ -0.6
OPTN-202ENST00000378747 BECN1Q14457 450 aa11.32□□□□□ -0.6
OPTN-202ENST00000378747 SNX21Q969T3 373 aa11.32□□□□□ -0.6
OPTN-202ENST00000378747 CDK19Q9BWU1 502 aa11.32□□□□□ -0.6
OPTN-202ENST00000378747 DIAPH1O60610 1272 aaKnown RBP11.32□□□□□ -0.6
OPTN-202ENST00000378747 FSD2A1L4K1 749 aa11.31□□□□□ -0.6
OPTN-202ENST00000378747 TSR2Q969E8 191 aaKnown RBP11.31□□□□□ -0.6
OPTN-202ENST00000378747 OVOS2A0A0J9YW53 1432 aa11.31□□□□□ -0.6
OPTN-202ENST00000378747 OVOS2Q6IE36 1432 aa11.31□□□□□ -0.6
OPTN-202ENST00000378747 CHGAP10645 457 aaKnown RBP11.31□□□□□ -0.6
OPTN-202ENST00000378747 MRPL50Q8N5N7 158 aaKnown RBP11.31□□□□□ -0.6
OPTN-202ENST00000378747 GGNBP2Q9H3C7 697 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms