RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 IGHDP01880 384 aa17.48■□□□□ 0.39
PRDM16-203ENST00000378391 TPM2P07951 284 aa17.48■□□□□ 0.39
PRDM16-203ENST00000378391 HOMER1Q86YM7 354 aa17.48■□□□□ 0.39
PRDM16-203ENST00000378391 ARHGEF11O15085 1522 aa17.48■□□□□ 0.39
PRDM16-203ENST00000378391 ERC2O15083 957 aa17.47■□□□□ 0.39
PRDM16-203ENST00000378391 IPO7O95373 1038 aaKnown RBP17.47■□□□□ 0.39
PRDM16-203ENST00000378391 MBD3O95983 291 aa17.47■□□□□ 0.39
PRDM16-203ENST00000378391 EIF2S2P20042 333 aaKnown RBP17.47■□□□□ 0.39
PRDM16-203ENST00000378391 GPATCH8Q9UKJ3 1502 aaKnown RBP17.47■□□□□ 0.39
PRDM16-203ENST00000378391 MARCH6O60337 910 aa17.47■□□□□ 0.39
PRDM16-203ENST00000378391 TMX4Q9H1E5 349 aaPredicted RBP17.47■□□□□ 0.39
PRDM16-203ENST00000378391 DDX58O95786 925 aaKnown RBP17.47■□□□□ 0.39
PRDM16-203ENST00000378391 HOOK1Q9UJC3 728 aaKnown RBP17.47■□□□□ 0.39
PRDM16-203ENST00000378391 G3BP1Q13283 466 aaKnown RBP eCLIP17.46■□□□□ 0.39
PRDM16-203ENST00000378391 WDR62O43379 1518 aa17.46■□□□□ 0.39
PRDM16-203ENST00000378391 WWC1Q8IX03 1113 aa17.46■□□□□ 0.39
PRDM16-203ENST00000378391 CWC15Q9P013 229 aaKnown RBP17.46■□□□□ 0.39
PRDM16-203ENST00000378391 ANKRD20A12PQ8NF67 263 aa17.46■□□□□ 0.39
PRDM16-203ENST00000378391 CCDC73Q6ZRK6 1079 aa17.46■□□□□ 0.38
PRDM16-203ENST00000378391 CCDC9Q9Y3X0 531 aaKnown RBP17.45■□□□□ 0.38
PRDM16-203ENST00000378391 GRPEL1Q9HAV7 217 aa17.45■□□□□ 0.38
PRDM16-203ENST00000378391 SYNJ2O15056 1496 aa17.45■□□□□ 0.38
PRDM16-203ENST00000378391 KIF21AQ7Z4S6 1674 aa17.44■□□□□ 0.38
PRDM16-203ENST00000378391 CFAP70Q5T0N1 1121 aa17.44■□□□□ 0.38
PRDM16-203ENST00000378391 MCM2P49736 904 aa17.44■□□□□ 0.38
PRDM16-203ENST00000378391 MTHFSP49914 203 aa17.44■□□□□ 0.38
PRDM16-203ENST00000378391 TBC1D2Q9BYX2 928 aa17.44■□□□□ 0.38
PRDM16-203ENST00000378391 SCAPERQ9BY12 1400 aa17.44■□□□□ 0.38
PRDM16-203ENST00000378391 IFT57Q9NWB7 429 aa17.44■□□□□ 0.38
PRDM16-203ENST00000378391 R3HCC1Q9Y3T6 440 aaKnown RBP17.44■□□□□ 0.38
PRDM16-203ENST00000378391 MRC2Q9UBG0 1479 aa17.43■□□□□ 0.38
PRDM16-203ENST00000378391 GTF2E1P29083 439 aaPredicted RBP17.43■□□□□ 0.38
PRDM16-203ENST00000378391 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.43■□□□□ 0.38
PRDM16-203ENST00000378391 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.43■□□□□ 0.38
PRDM16-203ENST00000378391 UHRF1BP1Q6BDS2 1440 aa17.43■□□□□ 0.38
PRDM16-203ENST00000378391 TRDNQ13061 729 aa17.43■□□□□ 0.38
PRDM16-203ENST00000378391 ARGLU1Q9NWB6 273 aaPredicted RBP17.43■□□□□ 0.38
PRDM16-203ENST00000378391 KDM2BQ8NHM5 1336 aa17.43■□□□□ 0.38
PRDM16-203ENST00000378391 NUP153P49790 1475 aaKnown RBP17.43■□□□□ 0.38
PRDM16-203ENST00000378391 IFT140Q96RY7 1462 aa17.43■□□□□ 0.38
PRDM16-203ENST00000378391 MAGI1Q96QZ7 1491 aaPredicted RBP17.42■□□□□ 0.38
PRDM16-203ENST00000378391 LETM1O95202 739 aaPredicted RBP17.42■□□□□ 0.38
PRDM16-203ENST00000378391 ARHGEF12Q9NZN5 1544 aa17.42■□□□□ 0.38
PRDM16-203ENST00000378391 CCDC141Q6ZP82 1450 aa17.42■□□□□ 0.38
PRDM16-203ENST00000378391 RAPGEF6Q8TEU7 1601 aa17.42■□□□□ 0.38
PRDM16-203ENST00000378391 MVPQ14764 893 aaKnown RBP17.42■□□□□ 0.38
PRDM16-203ENST00000378391 RABEP1Q15276 862 aa17.42■□□□□ 0.38
PRDM16-203ENST00000378391 TSPYL4Q9UJ04 414 aa17.42■□□□□ 0.38
PRDM16-203ENST00000378391 TTC5Q8N0Z6 440 aa17.42■□□□□ 0.38
PRDM16-203ENST00000378391 ITSN2Q9NZM3 1697 aa17.42■□□□□ 0.38
PRDM16-203ENST00000378391 PRAG1Q86YV5 1406 aa17.42■□□□□ 0.38
PRDM16-203ENST00000378391 BBXQ8WY36 941 aaPredicted RBP17.42■□□□□ 0.38
PRDM16-203ENST00000378391 PER1O15534 1290 aaPredicted RBP17.41■□□□□ 0.38
PRDM16-203ENST00000378391 CCDC191Q8NCU4 936 aa17.41■□□□□ 0.38
PRDM16-203ENST00000378391 PLEKHH1Q9ULM0 1364 aa17.41■□□□□ 0.38
PRDM16-203ENST00000378391 WDR63Q8IWG1 891 aa17.41■□□□□ 0.38
PRDM16-203ENST00000378391 CCDC47Q96A33 483 aaKnown RBP17.41■□□□□ 0.38
PRDM16-203ENST00000378391 GCC1Q96CN9 775 aa17.41■□□□□ 0.38
PRDM16-203ENST00000378391 CCDC173Q0VFZ6 552 aa17.4■□□□□ 0.38
PRDM16-203ENST00000378391 CAVIN1Q6NZI2 390 aaKnown RBP17.4■□□□□ 0.38
PRDM16-203ENST00000378391 NECTIN2Q92692 538 aa17.4■□□□□ 0.38
PRDM16-203ENST00000378391 GGNBP2Q9H3C7 697 aa17.4■□□□□ 0.38
PRDM16-203ENST00000378391 KDM5BQ9UGL1 1544 aa17.4■□□□□ 0.38
PRDM16-203ENST00000378391 EXOSC9Q06265 439 aaKnown RBP17.4■□□□□ 0.38
PRDM16-203ENST00000378391 TSR2Q969E8 191 aaKnown RBP17.4■□□□□ 0.38
PRDM16-203ENST00000378391 HMOX1P09601 288 aa17.39■□□□□ 0.38
PRDM16-203ENST00000378391 RNF214Q8ND24 703 aa17.39■□□□□ 0.38
PRDM16-203ENST00000378391 MNS1Q8NEH6 495 aa17.39■□□□□ 0.38
PRDM16-203ENST00000378391 RARSP54136 660 aaKnown RBP17.39■□□□□ 0.37
PRDM16-203ENST00000378391 PLCD4Q9BRC7 762 aa17.39■□□□□ 0.37
PRDM16-203ENST00000378391 GNAI3P08754 354 aa17.38■□□□□ 0.37
PRDM16-203ENST00000378391 HMGN5P82970 282 aaKnown RBP17.38■□□□□ 0.37
PRDM16-203ENST00000378391 NAT10Q9H0A0 1025 aaKnown RBP17.38■□□□□ 0.37
PRDM16-203ENST00000378391 PAXIP1Q6ZW49 1069 aaPredicted RBP17.38■□□□□ 0.37
PRDM16-203ENST00000378391 PSMA5P28066 241 aa17.38■□□□□ 0.37
PRDM16-203ENST00000378391 UBTFL1P0CB47 393 aaPredicted RBP17.38■□□□□ 0.37
PRDM16-203ENST00000378391 ZMYM4Q5VZL5 1548 aa17.37■□□□□ 0.37
PRDM16-203ENST00000378391 ESPNB1AK53 854 aa17.37■□□□□ 0.37
PRDM16-203ENST00000378391 H0YHG0 523 aa17.37■□□□□ 0.37
PRDM16-203ENST00000378391 RRP9O43818 475 aaKnown RBP17.37■□□□□ 0.37
PRDM16-203ENST00000378391 NEK4P51957 841 aa17.37■□□□□ 0.37
PRDM16-203ENST00000378391 TBC1D32Q96NH3 1257 aa17.37■□□□□ 0.37
PRDM16-203ENST00000378391 KDM5CP41229 1560 aa17.37■□□□□ 0.37
PRDM16-203ENST00000378391 CT47B1P0C2W7 299 aaPredicted RBP17.36■□□□□ 0.37
PRDM16-203ENST00000378391 DEF6Q9H4E7 631 aa17.36■□□□□ 0.37
PRDM16-203ENST00000378391 TESK2Q96S53 571 aa17.36■□□□□ 0.37
PRDM16-203ENST00000378391 PDCP20941 246 aa17.36■□□□□ 0.37
PRDM16-203ENST00000378391 DYDC1Q8WWB3 177 aa17.36■□□□□ 0.37
PRDM16-203ENST00000378391 CWC22Q9HCG8 908 aaKnown RBP17.36■□□□□ 0.37
PRDM16-203ENST00000378391 NOB1Q9ULX3 412 aaKnown RBP17.36■□□□□ 0.37
PRDM16-203ENST00000378391 ACBD3Q9H3P7 528 aa17.36■□□□□ 0.37
PRDM16-203ENST00000378391 CNTROBQ8N137 903 aa17.35■□□□□ 0.37
PRDM16-203ENST00000378391 BLMP54132 1417 aaPredicted RBP17.35■□□□□ 0.37
PRDM16-203ENST00000378391 SAFBQ15424 915 aaKnown RBP eCLIP17.35■□□□□ 0.37
PRDM16-203ENST00000378391 PRPF40AO75400 957 aaKnown RBP17.35■□□□□ 0.37
PRDM16-203ENST00000378391 PCMTD1Q96MG8 357 aaPredicted RBP17.35■□□□□ 0.37
PRDM16-203ENST00000378391 G3V3G9 751 aa17.35■□□□□ 0.37
PRDM16-203ENST00000378391 DCAF8Q5TAQ9 597 aa17.35■□□□□ 0.37
PRDM16-203ENST00000378391 SDF4Q9BRK5 362 aa17.35■□□□□ 0.37
PRDM16-203ENST00000378391 SLC12A5Q9H2X9 1139 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms