RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 CPSF1Q10570 1443 aaKnown RBP28.81■■■□□ 2.2
TRIM13-203ENST00000378183 TMF1P82094 1093 aa28.81■■■□□ 2.2
TRIM13-203ENST00000378183 CD163L1Q9NR16 1453 aa28.8■■■□□ 2.2
TRIM13-203ENST00000378183 SSH2Q76I76 1423 aa28.8■■■□□ 2.2
TRIM13-203ENST00000378183 PLEKHG5O94827 1062 aa28.8■■■□□ 2.2
TRIM13-203ENST00000378183 HSPA5P11021 654 aaKnown RBP28.8■■■□□ 2.2
TRIM13-203ENST00000378183 EIF4G2P78344 907 aaKnown RBP eCLIP28.79■■■□□ 2.2
TRIM13-203ENST00000378183 SLC12A5Q9H2X9 1139 aa28.79■■■□□ 2.2
TRIM13-203ENST00000378183 MON2Q7Z3U7 1717 aa28.79■■■□□ 2.2
TRIM13-203ENST00000378183 C8orf37Q96NL8 207 aa28.78■■■□□ 2.2
TRIM13-203ENST00000378183 BRD4O60885 1362 aaPredicted RBP28.77■■■□□ 2.2
TRIM13-203ENST00000378183 NRKQ7Z2Y5 1582 aa28.77■■■□□ 2.2
TRIM13-203ENST00000378183 ILDR2Q71H61 639 aa28.77■■■□□ 2.2
TRIM13-203ENST00000378183 TMC1Q8TDI8 760 aa28.77■■■□□ 2.2
TRIM13-203ENST00000378183 ZNF692Q9BU19 519 aaPredicted RBP28.77■■■□□ 2.2
TRIM13-203ENST00000378183 AFF2P51816 1311 aa28.75■■■□□ 2.19
TRIM13-203ENST00000378183 NUTM2GQ5VZR2 741 aa28.75■■■□□ 2.19
TRIM13-203ENST00000378183 POTEAQ6S8J7 498 aa28.75■■■□□ 2.19
TRIM13-203ENST00000378183 KTN1Q86UP2 1357 aaKnown RBP28.74■■■□□ 2.19
TRIM13-203ENST00000378183 PHRF1Q9P1Y6 1649 aaKnown RBP28.73■■■□□ 2.19
TRIM13-203ENST00000378183 ABTB2Q8N961 1025 aa28.73■■■□□ 2.19
TRIM13-203ENST00000378183 NGLY1Q96IV0 654 aa28.73■■■□□ 2.19
TRIM13-203ENST00000378183 PIK3C2AO00443 1686 aa28.73■■■□□ 2.19
TRIM13-203ENST00000378183 HAP1P54257 671 aaPredicted RBP28.71■■■□□ 2.19
TRIM13-203ENST00000378183 TTC21BQ7Z4L5 1316 aa28.7■■■□□ 2.19
TRIM13-203ENST00000378183 NINLQ9Y2I6 1382 aa28.7■■■□□ 2.18
TRIM13-203ENST00000378183 ZNF772Q68DY9 489 aaPredicted RBP28.69■■■□□ 2.18
TRIM13-203ENST00000378183 FNBP4Q8N3X1 1017 aaPredicted RBP28.69■■■□□ 2.18
TRIM13-203ENST00000378183 A0A1W2PP64 1363 aa28.69■■■□□ 2.18
TRIM13-203ENST00000378183 MYOM1P52179 1685 aa28.68■■■□□ 2.18
TRIM13-203ENST00000378183 CDCA8Q53HL2 280 aa28.68■■■□□ 2.18
TRIM13-203ENST00000378183 HDGFL2Q7Z4V5 671 aaPredicted RBP28.67■■■□□ 2.18
TRIM13-203ENST00000378183 TERF2IPQ9NYB0 399 aa28.67■■■□□ 2.18
TRIM13-203ENST00000378183 USP19O94966 1318 aa28.67■■■□□ 2.18
TRIM13-203ENST00000378183 NLRP13Q86W25 1043 aa28.65■■■□□ 2.18
TRIM13-203ENST00000378183 TTC21AQ8NDW8 1320 aa28.65■■■□□ 2.18
TRIM13-203ENST00000378183 PLCH1Q4KWH8 1693 aa28.64■■■□□ 2.18
TRIM13-203ENST00000378183 SLIT2O94813 1529 aa28.64■■■□□ 2.18
TRIM13-203ENST00000378183 FAM83GA6ND36 823 aa28.64■■■□□ 2.18
TRIM13-203ENST00000378183 BCL9LQ86UU0 1499 aa28.64■■■□□ 2.17
TRIM13-203ENST00000378183 NLRP6P59044 892 aa28.63■■■□□ 2.17
TRIM13-203ENST00000378183 USP21Q9UK80 565 aa28.63■■■□□ 2.17
TRIM13-203ENST00000378183 EDC4Q6P2E9 1401 aaKnown RBP28.62■■■□□ 2.17
TRIM13-203ENST00000378183 ANKRD36BQ8N2N9 1353 aa28.62■■■□□ 2.17
TRIM13-203ENST00000378183 SLIT3O75094 1523 aa28.61■■■□□ 2.17
TRIM13-203ENST00000378183 C11orf95C9JLR9 678 aaPredicted RBP28.61■■■□□ 2.17
TRIM13-203ENST00000378183 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.61■■■□□ 2.17
TRIM13-203ENST00000378183 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.6■■■□□ 2.17
TRIM13-203ENST00000378183 NWD2Q9ULI1 1742 aa28.6■■■□□ 2.17
TRIM13-203ENST00000378183 COL14A1Q05707 1796 aaKnown RBP28.6■■■□□ 2.17
TRIM13-203ENST00000378183 USP54Q70EL1 1684 aa28.59■■■□□ 2.17
TRIM13-203ENST00000378183 QTRT2Q9H974 415 aaKnown RBP28.59■■■□□ 2.17
TRIM13-203ENST00000378183 ZRANB1Q9UGI0 708 aa28.59■■■□□ 2.17
TRIM13-203ENST00000378183 GCP02774 474 aa28.58■■■□□ 2.17
TRIM13-203ENST00000378183 NME9Q86XW9 330 aa28.58■■■□□ 2.17
TRIM13-203ENST00000378183 KIAA0232Q92628 1395 aa28.58■■■□□ 2.17
TRIM13-203ENST00000378183 ZC3H6P61129 1189 aaKnown RBP28.57■■■□□ 2.16
TRIM13-203ENST00000378183 ATRNO75882 1429 aa28.56■■■□□ 2.16
TRIM13-203ENST00000378183 USP31Q70CQ4 1352 aa28.56■■■□□ 2.16
TRIM13-203ENST00000378183 NRAPQ86VF7 1730 aa28.56■■■□□ 2.16
TRIM13-203ENST00000378183 UNC5CLQ8IV45 518 aa28.55■■■□□ 2.16
TRIM13-203ENST00000378183 POLR3GLQ9BT43 218 aa28.54■■■□□ 2.16
TRIM13-203ENST00000378183 PRDM11Q9NQV5 511 aa28.54■■■□□ 2.16
TRIM13-203ENST00000378183 CPDO75976 1380 aa28.53■■■□□ 2.16
TRIM13-203ENST00000378183 CHRNA2Q15822 529 aa28.53■■■□□ 2.16
TRIM13-203ENST00000378183 TRPC5Q9UL62 973 aaPredicted RBP28.53■■■□□ 2.16
TRIM13-203ENST00000378183 RXRBP28702 533 aa28.52■■■□□ 2.16
TRIM13-203ENST00000378183 CARD14Q9BXL6 1004 aa28.51■■■□□ 2.15
TRIM13-203ENST00000378183 BTG4Q9NY30 223 aa28.51■■■□□ 2.15
TRIM13-203ENST00000378183 LMO7Q8WWI1 1683 aa28.5■■■□□ 2.15
TRIM13-203ENST00000378183 NFAT5O94916 1531 aa28.49■■■□□ 2.15
TRIM13-203ENST00000378183 RBM6P78332 1123 aaKnown RBP28.49■■■□□ 2.15
TRIM13-203ENST00000378183 OVOS2A0A0J9YW53 1432 aa28.48■■■□□ 2.15
TRIM13-203ENST00000378183 OVOS2Q6IE36 1432 aa28.48■■■□□ 2.15
TRIM13-203ENST00000378183 COL18A1P39060 1754 aa28.47■■■□□ 2.15
TRIM13-203ENST00000378183 KIF7Q2M1P5 1343 aa28.46■■■□□ 2.15
TRIM13-203ENST00000378183 KIF20BQ96Q89 1820 aa28.46■■■□□ 2.15
TRIM13-203ENST00000378183 CAMTA1Q9Y6Y1 1673 aa28.46■■■□□ 2.15
TRIM13-203ENST00000378183 KCNH5Q8NCM2 988 aa28.46■■■□□ 2.15
TRIM13-203ENST00000378183 GLI3P10071 1580 aa28.45■■■□□ 2.15
TRIM13-203ENST00000378183 SOX12O15370 315 aa28.45■■■□□ 2.14
TRIM13-203ENST00000378183 FYB1O15117 783 aa28.44■■■□□ 2.14
TRIM13-203ENST00000378183 VPS72Q15906 364 aa28.44■■■□□ 2.14
TRIM13-203ENST00000378183 GJD4Q96KN9 370 aaPredicted RBP28.44■■■□□ 2.14
TRIM13-203ENST00000378183 CDK12Q9NYV4 1490 aaPredicted RBP28.44■■■□□ 2.14
TRIM13-203ENST00000378183 NSD3Q9BZ95 1437 aa28.43■■■□□ 2.14
TRIM13-203ENST00000378183 ARHGEF25Q86VW2 580 aa28.43■■■□□ 2.14
TRIM13-203ENST00000378183 AATKQ6ZMQ8 1374 aa28.41■■■□□ 2.14
TRIM13-203ENST00000378183 ZBTB7CA1YPR0 619 aa28.41■■■□□ 2.14
TRIM13-203ENST00000378183 LTN1O94822 1766 aa28.41■■■□□ 2.14
TRIM13-203ENST00000378183 RGPD5Q99666 1765 aa28.41■■■□□ 2.14
TRIM13-203ENST00000378183 RGS12O14924 1447 aa28.41■■■□□ 2.14
TRIM13-203ENST00000378183 COG3Q96JB2 828 aa28.39■■■□□ 2.14
TRIM13-203ENST00000378183 GGNBP2Q9H3C7 697 aa28.39■■■□□ 2.14
TRIM13-203ENST00000378183 PANK3Q9H999 370 aa28.39■■■□□ 2.14
TRIM13-203ENST00000378183 AXIN2Q9Y2T1 843 aa28.37■■■□□ 2.13
TRIM13-203ENST00000378183 STRN4Q9NRL3 753 aa28.36■■■□□ 2.13
TRIM13-203ENST00000378183 CCDC9Q9Y3X0 531 aaKnown RBP28.36■■■□□ 2.13
TRIM13-203ENST00000378183 CCDC7Q96M83 1385 aa28.36■■■□□ 2.13
TRIM13-203ENST00000378183 COL5A2P05997 1499 aaPredicted RBP28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms