RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 FMNL2Q96PY5 1086 aa16.91■□□□□ 0.3
TRIM13-202ENST00000378182 HSP90AB4PQ58FF6 505 aa16.91■□□□□ 0.3
TRIM13-202ENST00000378182 CCDC158Q5M9N0 1113 aa16.9■□□□□ 0.3
TRIM13-202ENST00000378182 C1orf115Q9H7X2 142 aa16.9■□□□□ 0.3
TRIM13-202ENST00000378182 MPHOSPH8Q99549 860 aa16.9■□□□□ 0.3
TRIM13-202ENST00000378182 USP5P45974 858 aa16.9■□□□□ 0.3
TRIM13-202ENST00000378182 PLEKHO1Q53GL0 409 aaPredicted RBP16.9■□□□□ 0.3
TRIM13-202ENST00000378182 WDR78Q5VTH9 848 aa16.9■□□□□ 0.3
TRIM13-202ENST00000378182 RUNDC1Q96C34 613 aa16.9■□□□□ 0.3
TRIM13-202ENST00000378182 TANGO6Q9C0B7 1094 aa16.9■□□□□ 0.3
TRIM13-202ENST00000378182 SDF4Q9BRK5 362 aa16.89■□□□□ 0.29
TRIM13-202ENST00000378182 USP47Q96K76 1375 aa16.89■□□□□ 0.29
TRIM13-202ENST00000378182 SURF6O75683 361 aaKnown RBP16.89■□□□□ 0.29
TRIM13-202ENST00000378182 SMC2O95347 1197 aa16.89■□□□□ 0.29
TRIM13-202ENST00000378182 ZNF76P36508 570 aa16.89■□□□□ 0.29
TRIM13-202ENST00000378182 RRP1P56182 461 aaKnown RBP16.89■□□□□ 0.29
TRIM13-202ENST00000378182 MAP7D2Q96T17 732 aa16.89■□□□□ 0.29
TRIM13-202ENST00000378182 FKBP4Q02790 459 aaKnown RBP eCLIP16.88■□□□□ 0.29
TRIM13-202ENST00000378182 TXLNAP40222 546 aa16.88■□□□□ 0.29
TRIM13-202ENST00000378182 GNAI1P63096 354 aa16.88■□□□□ 0.29
TRIM13-202ENST00000378182 CCDC30Q5VVM6 783 aa16.88■□□□□ 0.29
TRIM13-202ENST00000378182 MNS1Q8NEH6 495 aa16.88■□□□□ 0.29
TRIM13-202ENST00000378182 MIA2Q96PC5 1412 aa16.88■□□□□ 0.29
TRIM13-202ENST00000378182 RAPGEF2Q9Y4G8 1499 aa16.87■□□□□ 0.29
TRIM13-202ENST00000378182 SKOR2Q2VWA4 1001 aaPredicted RBP16.87■□□□□ 0.29
TRIM13-202ENST00000378182 CA8P35219 290 aa16.87■□□□□ 0.29
TRIM13-202ENST00000378182 SCLT1Q96NL6 688 aa16.87■□□□□ 0.29
TRIM13-202ENST00000378182 SSBP05455 408 aaKnown RBP eCLIP16.87■□□□□ 0.29
TRIM13-202ENST00000378182 CDR1P51861 262 aa16.87■□□□□ 0.29
TRIM13-202ENST00000378182 PANK1Q8TE04 598 aa16.87■□□□□ 0.29
TRIM13-202ENST00000378182 CCDC69A6NI79 296 aa16.87■□□□□ 0.29
TRIM13-202ENST00000378182 ADAMTS2O95450 1211 aa16.87■□□□□ 0.29
TRIM13-202ENST00000378182 TEX35Q5T0J7 233 aa16.86■□□□□ 0.29
TRIM13-202ENST00000378182 PDE4AP27815 886 aa16.86■□□□□ 0.29
TRIM13-202ENST00000378182 PSMA5P28066 241 aa16.86■□□□□ 0.29
TRIM13-202ENST00000378182 MTHFSP49914 203 aa16.85■□□□□ 0.29
TRIM13-202ENST00000378182 ARHGAP5Q13017 1502 aa16.85■□□□□ 0.29
TRIM13-202ENST00000378182 SEPT7Q16181 437 aaKnown RBP16.85■□□□□ 0.29
TRIM13-202ENST00000378182 CLASRPQ8N2M8 674 aaKnown RBP16.84■□□□□ 0.29
TRIM13-202ENST00000378182 PLCD4Q9BRC7 762 aa16.84■□□□□ 0.29
TRIM13-202ENST00000378182 NAT10Q9H0A0 1025 aaKnown RBP16.84■□□□□ 0.29
TRIM13-202ENST00000378182 SSR1P43307 286 aaKnown RBP16.84■□□□□ 0.29
TRIM13-202ENST00000378182 ECM2O94769 699 aaPredicted RBP16.84■□□□□ 0.29
TRIM13-202ENST00000378182 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.83■□□□□ 0.29
TRIM13-202ENST00000378182 SOGA3Q5TF21 947 aa16.83■□□□□ 0.28
TRIM13-202ENST00000378182 CCDC57Q2TAC2 916 aa16.83■□□□□ 0.28
TRIM13-202ENST00000378182 HSP90AA2PQ14568 343 aaPredicted RBP16.83■□□□□ 0.28
TRIM13-202ENST00000378182 MYO6Q9UM54 1294 aa16.82■□□□□ 0.28
TRIM13-202ENST00000378182 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.82■□□□□ 0.28
TRIM13-202ENST00000378182 RAI14Q9P0K7 980 aa16.81■□□□□ 0.28
TRIM13-202ENST00000378182 PRAM1Q96QH2 718 aa16.81■□□□□ 0.28
TRIM13-202ENST00000378182 CALRP27797 417 aaKnown RBP16.81■□□□□ 0.28
TRIM13-202ENST00000378182 ERC1Q8IUD2 1116 aa16.81■□□□□ 0.28
TRIM13-202ENST00000378182 ENOX2Q16206 610 aaKnown RBP16.8■□□□□ 0.28
TRIM13-202ENST00000378182 FAM13BQ9NYF5 915 aa16.8■□□□□ 0.28
TRIM13-202ENST00000378182 TDO2P48775 406 aa16.8■□□□□ 0.28
TRIM13-202ENST00000378182 FILIP1LQ4L180 1135 aa16.8■□□□□ 0.28
TRIM13-202ENST00000378182 DEF6Q9H4E7 631 aa16.8■□□□□ 0.28
TRIM13-202ENST00000378182 SPG7Q9UQ90 795 aa16.8■□□□□ 0.28
TRIM13-202ENST00000378182 RNF214Q8ND24 703 aa16.79■□□□□ 0.28
TRIM13-202ENST00000378182 PRDM11Q9NQV5 511 aa16.79■□□□□ 0.28
TRIM13-202ENST00000378182 ZC3H6P61129 1189 aaKnown RBP16.79■□□□□ 0.28
TRIM13-202ENST00000378182 GAS2L2Q8NHY3 880 aa16.79■□□□□ 0.28
TRIM13-202ENST00000378182 CHMP5Q9NZZ3 219 aa16.79■□□□□ 0.28
TRIM13-202ENST00000378182 ANKIB1Q9P2G1 1089 aa16.79■□□□□ 0.28
TRIM13-202ENST00000378182 PSMD1Q99460 953 aa16.79■□□□□ 0.28
TRIM13-202ENST00000378182 MROH2BQ7Z745 1585 aa16.79■□□□□ 0.28
TRIM13-202ENST00000378182 ZPR1O75312 459 aa16.79■□□□□ 0.28
TRIM13-202ENST00000378182 SMARCE1Q969G3 411 aa16.78■□□□□ 0.28
TRIM13-202ENST00000378182 LRP2BPQ9P2M1 347 aa16.78■□□□□ 0.28
TRIM13-202ENST00000378182 TTC16Q8NEE8 873 aa16.78■□□□□ 0.28
TRIM13-202ENST00000378182 TRMT1LQ7Z2T5 733 aaKnown RBP16.78■□□□□ 0.28
TRIM13-202ENST00000378182 BTBD11A6QL63 1104 aa16.77■□□□□ 0.28
TRIM13-202ENST00000378182 SPC24Q8NBT2 197 aa16.77■□□□□ 0.27
TRIM13-202ENST00000378182 TMOD2Q9NZR1 351 aa16.77■□□□□ 0.27
TRIM13-202ENST00000378182 NACAP1Q9BZK3 213 aa16.77■□□□□ 0.27
TRIM13-202ENST00000378182 ABCF2Q9UG63 623 aa16.77■□□□□ 0.27
TRIM13-202ENST00000378182 LIG1P18858 919 aa16.76■□□□□ 0.27
TRIM13-202ENST00000378182 HSP90B2PQ58FF3 399 aa16.76■□□□□ 0.27
TRIM13-202ENST00000378182 KINO60870 393 aaKnown RBP16.76■□□□□ 0.27
TRIM13-202ENST00000378182 ZNF530Q6P9A1 599 aaPredicted RBP16.76■□□□□ 0.27
TRIM13-202ENST00000378182 SLC26A8Q96RN1 970 aa16.76■□□□□ 0.27
TRIM13-202ENST00000378182 CENPHQ9H3R5 247 aa16.76■□□□□ 0.27
TRIM13-202ENST00000378182 PRKAR2BP31323 418 aa16.76■□□□□ 0.27
TRIM13-202ENST00000378182 HDGFL1Q5TGJ6 251 aa16.76■□□□□ 0.27
TRIM13-202ENST00000378182 CRACR2BQ8N4Y2 399 aaPredicted RBP16.76■□□□□ 0.27
TRIM13-202ENST00000378182 ACBD3Q9H3P7 528 aa16.75■□□□□ 0.27
TRIM13-202ENST00000378182 SLC4A8Q2Y0W8 1093 aa16.75■□□□□ 0.27
TRIM13-202ENST00000378182 SULT6B1Q6IMI4 303 aa16.75■□□□□ 0.27
TRIM13-202ENST00000378182 WDHD1O75717 1129 aaPredicted RBP16.75■□□□□ 0.27
TRIM13-202ENST00000378182 CDK19Q9BWU1 502 aa16.75■□□□□ 0.27
TRIM13-202ENST00000378182 C22orf23Q9BZE7 217 aa16.75■□□□□ 0.27
TRIM13-202ENST00000378182 WWC3Q9ULE0 1092 aa16.75■□□□□ 0.27
TRIM13-202ENST00000378182 SLC4A2P04920 1241 aa16.75■□□□□ 0.27
TRIM13-202ENST00000378182 STK38Q15208 465 aa16.75■□□□□ 0.27
TRIM13-202ENST00000378182 TRIM5Q9C035 493 aa16.75■□□□□ 0.27
TRIM13-202ENST00000378182 ZNF644Q9H582 1327 aaPredicted RBP16.75■□□□□ 0.27
TRIM13-202ENST00000378182 FAM177A1Q8N128 213 aaPredicted RBP16.75■□□□□ 0.27
TRIM13-202ENST00000378182 ZRSR2Q15696 482 aaKnown RBP16.74■□□□□ 0.27
TRIM13-202ENST00000378182 FANCD2Q9BXW9 1451 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms