RNA–Protein interactions for RNA: ENST00000377883.7

USP30-202, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-202ENST00000377883 CCDC61Q9Y6R9 512 aa27.03■■□□□ 1.92
USP30-202ENST00000377883 BRWD3Q6RI45 1802 aa27.02■■□□□ 1.92
USP30-202ENST00000377883 ATP7BP35670 1465 aa27.02■■□□□ 1.92
USP30-202ENST00000377883 NBPF1Q3BBV0 1214 aa27.02■■□□□ 1.92
USP30-202ENST00000377883 KIAA1210Q9ULL0 1709 aa27.02■■□□□ 1.92
USP30-202ENST00000377883 A0A0G2JS52 829 aa27.01■■□□□ 1.91
USP30-202ENST00000377883 MYT1Q01538 1121 aa27.01■■□□□ 1.91
USP30-202ENST00000377883 ITSN1Q15811 1721 aa27■■□□□ 1.91
USP30-202ENST00000377883 PRDM11Q9NQV5 511 aa27■■□□□ 1.91
USP30-202ENST00000377883 COL14A1Q05707 1796 aaKnown RBP26.99■■□□□ 1.91
USP30-202ENST00000377883 FAM98CQ17RN3 349 aaKnown RBP26.99■■□□□ 1.91
USP30-202ENST00000377883 NBPF8Q3BBV2 869 aa26.99■■□□□ 1.91
USP30-202ENST00000377883 EP400Q96L91 3159 aa26.99■■□□□ 1.91
USP30-202ENST00000377883 PLEKHG3A1L390 1219 aa26.98■■□□□ 1.91
USP30-202ENST00000377883 ACEP12821 1306 aa26.97■■□□□ 1.91
USP30-202ENST00000377883 POLR3AO14802 1390 aaPredicted RBP26.96■■□□□ 1.91
USP30-202ENST00000377883 SPATA31A5Q5VU36 1347 aa26.95■■□□□ 1.91
USP30-202ENST00000377883 SPATA31A7Q8IWB4 1347 aa26.95■■□□□ 1.91
USP30-202ENST00000377883 NRAPQ86VF7 1730 aa26.95■■□□□ 1.9
USP30-202ENST00000377883 DEFB132Q7Z7B7 95 aa26.94■■□□□ 1.9
USP30-202ENST00000377883 CENPJQ9HC77 1338 aaPredicted RBP26.93■■□□□ 1.9
USP30-202ENST00000377883 SRPK2P78362 688 aaKnown RBP26.92■■□□□ 1.9
USP30-202ENST00000377883 NUTM2GQ5VZR2 741 aa26.92■■□□□ 1.9
USP30-202ENST00000377883 KIAA0232Q92628 1395 aa26.92■■□□□ 1.9
USP30-202ENST00000377883 CRYBG1Q9Y4K1 1723 aa26.9■■□□□ 1.9
USP30-202ENST00000377883 ZC3H6P61129 1189 aaKnown RBP26.9■■□□□ 1.9
USP30-202ENST00000377883 CHRNA2Q15822 529 aa26.9■■□□□ 1.9
USP30-202ENST00000377883 ABTB2Q8N961 1025 aa26.9■■□□□ 1.9
USP30-202ENST00000377883 L3MBTL2Q969R5 705 aa26.9■■□□□ 1.9
USP30-202ENST00000377883 CABP2Q9NPB3 220 aa26.87■■□□□ 1.89
USP30-202ENST00000377883 STRN4Q9NRL3 753 aa26.87■■□□□ 1.89
USP30-202ENST00000377883 TOPAZ1Q8N9V7 1692 aa26.86■■□□□ 1.89
USP30-202ENST00000377883 BAG6P46379 1132 aa26.86■■□□□ 1.89
USP30-202ENST00000377883 SPATA31A1Q5TZJ5 1347 aa26.86■■□□□ 1.89
USP30-202ENST00000377883 EVA1CP58658 441 aa26.85■■□□□ 1.89
USP30-202ENST00000377883 NLRP13Q86W25 1043 aa26.85■■□□□ 1.89
USP30-202ENST00000377883 PPIP5K1Q6PFW1 1433 aa26.83■■□□□ 1.89
USP30-202ENST00000377883 BRD4O60885 1362 aaPredicted RBP26.83■■□□□ 1.88
USP30-202ENST00000377883 SIN3AQ96ST3 1273 aa26.82■■□□□ 1.88
USP30-202ENST00000377883 PHRF1Q9P1Y6 1649 aaKnown RBP26.81■■□□□ 1.88
USP30-202ENST00000377883 TRIM26Q12899 539 aaPredicted RBP26.8■■□□□ 1.88
USP30-202ENST00000377883 FAM182BQ5T319 152 aa26.8■■□□□ 1.88
USP30-202ENST00000377883 CABP1Q9NZU7 370 aa26.8■■□□□ 1.88
USP30-202ENST00000377883 USP19O94966 1318 aa26.8■■□□□ 1.88
USP30-202ENST00000377883 GCP02774 474 aa26.79■■□□□ 1.88
USP30-202ENST00000377883 NEUROD1Q13562 356 aa26.79■■□□□ 1.88
USP30-202ENST00000377883 CPDO75976 1380 aa26.79■■□□□ 1.88
USP30-202ENST00000377883 THSD7AQ9UPZ6 1657 aa26.77■■□□□ 1.88
USP30-202ENST00000377883 EVC2Q86UK5 1308 aa26.77■■□□□ 1.88
USP30-202ENST00000377883 BARGINQ6ZT62 677 aa26.77■■□□□ 1.88
USP30-202ENST00000377883 USP35Q9P2H5 1018 aa26.77■■□□□ 1.88
USP30-202ENST00000377883 FAM196AQ6ZSG2 479 aa26.76■■□□□ 1.87
USP30-202ENST00000377883 SSH2Q76I76 1423 aa26.75■■□□□ 1.87
USP30-202ENST00000377883 QRICH2Q9H0J4 1663 aa26.75■■□□□ 1.87
USP30-202ENST00000377883 NLRP6P59044 892 aa26.74■■□□□ 1.87
USP30-202ENST00000377883 EN1Q05925 392 aaPredicted RBP26.74■■□□□ 1.87
USP30-202ENST00000377883 LARP1Q6PKG0 1096 aaKnown RBP26.74■■□□□ 1.87
USP30-202ENST00000377883 SRCAPQ6ZRS2 3230 aa26.73■■□□□ 1.87
USP30-202ENST00000377883 TCP11L2Q8N4U5 519 aa26.73■■□□□ 1.87
USP30-202ENST00000377883 CAMTA1Q9Y6Y1 1673 aa26.73■■□□□ 1.87
USP30-202ENST00000377883 ROCK2O75116 1388 aaKnown RBP26.72■■□□□ 1.87
USP30-202ENST00000377883 NRKQ7Z2Y5 1582 aa26.72■■□□□ 1.87
USP30-202ENST00000377883 PDE3BQ13370 1112 aa26.72■■□□□ 1.87
USP30-202ENST00000377883 USP6P35125 1406 aa26.72■■□□□ 1.87
USP30-202ENST00000377883 THRAP3Q9Y2W1 955 aaKnown RBP26.71■■□□□ 1.87
USP30-202ENST00000377883 RGPD1P0DJD0 1748 aa26.7■■□□□ 1.87
USP30-202ENST00000377883 ZNF692Q9BU19 519 aaPredicted RBP26.7■■□□□ 1.86
USP30-202ENST00000377883 TRPM1Q7Z4N2 1603 aa26.68■■□□□ 1.86
USP30-202ENST00000377883 TRIM37O94972 964 aa26.68■■□□□ 1.86
USP30-202ENST00000377883 DISP2A7MBM2 1401 aa26.67■■□□□ 1.86
USP30-202ENST00000377883 ZBTB7CA1YPR0 619 aa26.67■■□□□ 1.86
USP30-202ENST00000377883 PSDA5PKW4 1024 aaPredicted RBP26.66■■□□□ 1.86
USP30-202ENST00000377883 LMO7Q8WWI1 1683 aa26.66■■□□□ 1.86
USP30-202ENST00000377883 AATKQ6ZMQ8 1374 aa26.64■■□□□ 1.86
USP30-202ENST00000377883 EZH2Q15910 746 aaKnown RBP26.64■■□□□ 1.86
USP30-202ENST00000377883 APBA3O96018 575 aa26.63■■□□□ 1.85
USP30-202ENST00000377883 CAMKK2Q96RR4 588 aa26.62■■□□□ 1.85
USP30-202ENST00000377883 TTC21BQ7Z4L5 1316 aa26.62■■□□□ 1.85
USP30-202ENST00000377883 COL5A2P05997 1499 aaPredicted RBP26.62■■□□□ 1.85
USP30-202ENST00000377883 C11orf95C9JLR9 678 aaPredicted RBP26.61■■□□□ 1.85
USP30-202ENST00000377883 CRB1P82279 1406 aa26.6■■□□□ 1.85
USP30-202ENST00000377883 KCNH5Q8NCM2 988 aa26.6■■□□□ 1.85
USP30-202ENST00000377883 SLIT3O75094 1523 aa26.6■■□□□ 1.85
USP30-202ENST00000377883 TTC21AQ8NDW8 1320 aa26.59■■□□□ 1.85
USP30-202ENST00000377883 TNS1Q9HBL0 1735 aaKnown RBP26.59■■□□□ 1.85
USP30-202ENST00000377883 PARD3Q8TEW0 1356 aa26.58■■□□□ 1.85
USP30-202ENST00000377883 R3HDM1Q15032 1099 aaKnown RBP26.58■■□□□ 1.85
USP30-202ENST00000377883 TOM1L2Q6ZVM7 507 aa26.57■■□□□ 1.84
USP30-202ENST00000377883 ARHGEF25Q86VW2 580 aa26.56■■□□□ 1.84
USP30-202ENST00000377883 CARD11Q9BXL7 1154 aa26.56■■□□□ 1.84
USP30-202ENST00000377883 LRP5O75197 1615 aa26.54■■□□□ 1.84
USP30-202ENST00000377883 PIK3C2AO00443 1686 aa26.54■■□□□ 1.84
USP30-202ENST00000377883 AXIN2Q9Y2T1 843 aa26.54■■□□□ 1.84
USP30-202ENST00000377883 KTN1Q86UP2 1357 aaKnown RBP26.54■■□□□ 1.84
USP30-202ENST00000377883 CPSF1Q10570 1443 aaKnown RBP26.54■■□□□ 1.84
USP30-202ENST00000377883 SBNO2Q9Y2G9 1366 aa26.53■■□□□ 1.84
USP30-202ENST00000377883 WDR17Q8IZU2 1322 aa26.52■■□□□ 1.84
USP30-202ENST00000377883 AKAP12Q02952 1782 aa26.51■■□□□ 1.83
USP30-202ENST00000377883 PARP4Q9UKK3 1724 aaKnown RBP26.51■■□□□ 1.83
USP30-202ENST00000377883 SOX12O15370 315 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms