RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 GOLGA6L3A6NEY3 463 aa19.61■□□□□ 0.73
FXN-201ENST00000377270 TULP1O00294 542 aaPredicted RBP19.61■□□□□ 0.73
FXN-201ENST00000377270 STK26Q9P289 416 aa19.61■□□□□ 0.73
FXN-201ENST00000377270 C8orf34Q49A92 452 aa19.6■□□□□ 0.73
FXN-201ENST00000377270 FBXO31Q5XUX0 539 aaPredicted RBP19.6■□□□□ 0.73
FXN-201ENST00000377270 RNF216Q9NWF9 866 aaPredicted RBP19.6■□□□□ 0.73
FXN-201ENST00000377270 POLR3AO14802 1390 aaPredicted RBP19.6■□□□□ 0.73
FXN-201ENST00000377270 C20orf194Q5TEA3 1177 aa19.59■□□□□ 0.73
FXN-201ENST00000377270 KDM2BQ8NHM5 1336 aa19.59■□□□□ 0.73
FXN-201ENST00000377270 CABP2Q9NPB3 220 aa19.58■□□□□ 0.73
FXN-201ENST00000377270 ZSCAN20P17040 1043 aaPredicted RBP19.58■□□□□ 0.72
FXN-201ENST00000377270 PUS7Q96PZ0 661 aaKnown RBP19.58■□□□□ 0.72
FXN-201ENST00000377270 SPINK5Q9NQ38 1064 aaPredicted RBP19.57■□□□□ 0.72
FXN-201ENST00000377270 CGNL1Q0VF96 1302 aa19.57■□□□□ 0.72
FXN-201ENST00000377270 ZFYVE9O95405 1425 aa19.57■□□□□ 0.72
FXN-201ENST00000377270 TRMT2AQ8IZ69 625 aaKnown RBP19.56■□□□□ 0.72
FXN-201ENST00000377270 RGS22Q8NE09 1264 aa19.56■□□□□ 0.72
FXN-201ENST00000377270 ARHGEF28Q8N1W1 1705 aaKnown RBP19.56■□□□□ 0.72
FXN-201ENST00000377270 CENPQQ7L2Z9 268 aaPredicted RBP19.55■□□□□ 0.72
FXN-201ENST00000377270 BCCIPQ9P287 314 aaKnown RBP eCLIP19.55■□□□□ 0.72
FXN-201ENST00000377270 TULP4Q9NRJ4 1543 aa19.55■□□□□ 0.72
FXN-201ENST00000377270 PREX1Q8TCU6 1659 aa19.55■□□□□ 0.72
FXN-201ENST00000377270 FSD2A1L4K1 749 aa19.55■□□□□ 0.72
FXN-201ENST00000377270 PLPPR3Q6T4P5 718 aa19.55■□□□□ 0.72
FXN-201ENST00000377270 MYO5BQ9ULV0 1848 aa19.54■□□□□ 0.72
FXN-201ENST00000377270 RIMBP3CA6NJZ7 1639 aa19.54■□□□□ 0.72
FXN-201ENST00000377270 RIMBP3BA6NNM3 1639 aa19.54■□□□□ 0.72
FXN-201ENST00000377270 RIMBP3Q9UFD9 1639 aa19.54■□□□□ 0.72
FXN-201ENST00000377270 TMEM131LA2VDJ0 1609 aa19.53■□□□□ 0.72
FXN-201ENST00000377270 E9PSI1 815 aa19.53■□□□□ 0.72
FXN-201ENST00000377270 CDK11BP21127 795 aaKnown RBP19.53■□□□□ 0.72
FXN-201ENST00000377270 MTHFSP49914 203 aa19.53■□□□□ 0.72
FXN-201ENST00000377270 NGEFQ8N5V2 710 aa19.53■□□□□ 0.72
FXN-201ENST00000377270 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.53■□□□□ 0.72
FXN-201ENST00000377270 STAG3Q9UJ98 1225 aa19.53■□□□□ 0.72
FXN-201ENST00000377270 ANKRD36BQ8N2N9 1353 aa19.53■□□□□ 0.72
FXN-201ENST00000377270 KIF20AO95235 890 aa19.53■□□□□ 0.72
FXN-201ENST00000377270 SRPK2P78362 688 aaKnown RBP19.53■□□□□ 0.72
FXN-201ENST00000377270 IRX3P78415 501 aaPredicted RBP19.53■□□□□ 0.72
FXN-201ENST00000377270 DMRT2Q9Y5R5 561 aa19.52■□□□□ 0.72
FXN-201ENST00000377270 TSPOAP1O95153 1857 aa19.52■□□□□ 0.71
FXN-201ENST00000377270 DIP2BQ9P265 1576 aa19.51■□□□□ 0.71
FXN-201ENST00000377270 ZBTB22O15209 634 aa19.51■□□□□ 0.71
FXN-201ENST00000377270 KCNG1Q9UIX4 513 aa19.5■□□□□ 0.71
FXN-201ENST00000377270 NKTRP30414 1462 aaKnown RBP19.5■□□□□ 0.71
FXN-201ENST00000377270 CFAP53Q96M91 514 aa19.5■□□□□ 0.71
FXN-201ENST00000377270 PRAM1Q96QH2 718 aa19.5■□□□□ 0.71
FXN-201ENST00000377270 MINK1Q8N4C8 1332 aaPredicted RBP19.49■□□□□ 0.71
FXN-201ENST00000377270 NEUROD2Q15784 382 aa19.49■□□□□ 0.71
FXN-201ENST00000377270 DNTTIP2Q5QJE6 756 aaKnown RBP19.49■□□□□ 0.71
FXN-201ENST00000377270 WWC1Q8IX03 1113 aa19.49■□□□□ 0.71
FXN-201ENST00000377270 CNPY4Q8N129 248 aa19.49■□□□□ 0.71
FXN-201ENST00000377270 USP32Q8NFA0 1604 aa19.49■□□□□ 0.71
FXN-201ENST00000377270 RUNDC1Q96C34 613 aa19.49■□□□□ 0.71
FXN-201ENST00000377270 MYH16Q9H6N6 1097 aa19.48■□□□□ 0.71
FXN-201ENST00000377270 RRP7AQ9Y3A4 280 aaKnown RBP19.47■□□□□ 0.71
FXN-201ENST00000377270 BCAR3O75815 825 aa19.47■□□□□ 0.71
FXN-201ENST00000377270 MLECQ14165 292 aa19.47■□□□□ 0.71
FXN-201ENST00000377270 MTERF4Q7Z6M4 381 aaKnown RBP19.47■□□□□ 0.71
FXN-201ENST00000377270 SHPRHQ149N8 1683 aa19.47■□□□□ 0.71
FXN-201ENST00000377270 YTHDC2Q9H6S0 1430 aaKnown RBP19.47■□□□□ 0.71
FXN-201ENST00000377270 MAPK8IP2Q13387 824 aaPredicted RBP19.46■□□□□ 0.71
FXN-201ENST00000377270 TRIM44Q96DX7 344 aaPredicted RBP19.46■□□□□ 0.71
FXN-201ENST00000377270 NSD2O96028 1365 aa19.46■□□□□ 0.71
FXN-201ENST00000377270 TCP11L2Q8N4U5 519 aa19.46■□□□□ 0.71
FXN-201ENST00000377270 PTPRMP28827 1452 aa19.46■□□□□ 0.71
FXN-201ENST00000377270 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.45■□□□□ 0.7
FXN-201ENST00000377270 PPP6R1Q9UPN7 881 aa19.45■□□□□ 0.7
FXN-201ENST00000377270 TERF1P54274 439 aa19.45■□□□□ 0.7
FXN-201ENST00000377270 A0A1W2PP64 1363 aa19.45■□□□□ 0.7
FXN-201ENST00000377270 GTPBP4Q9BZE4 634 aaKnown RBP19.44■□□□□ 0.7
FXN-201ENST00000377270 LETM1O95202 739 aaPredicted RBP19.44■□□□□ 0.7
FXN-201ENST00000377270 NINLQ9Y2I6 1382 aa19.43■□□□□ 0.7
FXN-201ENST00000377270 OFD1O75665 1012 aa19.43■□□□□ 0.7
FXN-201ENST00000377270 GGNBP2Q9H3C7 697 aa19.43■□□□□ 0.7
FXN-201ENST00000377270 MRE11P49959 708 aa19.42■□□□□ 0.7
FXN-201ENST00000377270 ATAD2Q6PL18 1390 aa19.42■□□□□ 0.7
FXN-201ENST00000377270 TERF2IPQ9NYB0 399 aa19.42■□□□□ 0.7
FXN-201ENST00000377270 ALKQ9UM73 1620 aa19.42■□□□□ 0.7
FXN-201ENST00000377270 AGLP35573 1532 aa19.42■□□□□ 0.7
FXN-201ENST00000377270 U2AF1L5P0DN76 240 aaPredicted RBP19.41■□□□□ 0.7
FXN-201ENST00000377270 U2AF1Q01081 240 aaKnown RBP eCLIP19.41■□□□□ 0.7
FXN-201ENST00000377270 CNKSR2Q8WXI2 1034 aa19.41■□□□□ 0.7
FXN-201ENST00000377270 ABCC11Q96J66 1382 aa19.41■□□□□ 0.7
FXN-201ENST00000377270 BECN1Q14457 450 aa19.4■□□□□ 0.7
FXN-201ENST00000377270 CCDC94Q9BW85 323 aaPredicted RBP19.4■□□□□ 0.7
FXN-201ENST00000377270 CDK19Q9BWU1 502 aa19.4■□□□□ 0.7
FXN-201ENST00000377270 GZF1Q9H116 711 aaPredicted RBP19.4■□□□□ 0.7
FXN-201ENST00000377270 CLTCQ00610 1675 aaKnown RBP19.4■□□□□ 0.7
FXN-201ENST00000377270 REREQ9P2R6 1566 aa19.4■□□□□ 0.7
FXN-201ENST00000377270 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.39■□□□□ 0.69
FXN-201ENST00000377270 CERS3Q8IU89 383 aa19.39■□□□□ 0.69
FXN-201ENST00000377270 TAF3Q5VWG9 929 aa19.38■□□□□ 0.69
FXN-201ENST00000377270 FYB1O15117 783 aa19.38■□□□□ 0.69
FXN-201ENST00000377270 PHF23Q9BUL5 403 aaPredicted RBP19.38■□□□□ 0.69
FXN-201ENST00000377270 USP19O94966 1318 aa19.38■□□□□ 0.69
FXN-201ENST00000377270 WDR63Q8IWG1 891 aa19.38■□□□□ 0.69
FXN-201ENST00000377270 IQSEC2Q5JU85 1478 aa19.37■□□□□ 0.69
FXN-201ENST00000377270 A2ML1A8K2U0 1454 aa19.37■□□□□ 0.69
FXN-201ENST00000377270 HDGFL2Q7Z4V5 671 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms