RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 TRPC5Q9UL62 973 aaPredicted RBP31.23■■■□□ 2.59
SRM-201ENST00000376957 TRPM3Q9HCF6 1732 aaPredicted RBP31.23■■■□□ 2.59
SRM-201ENST00000376957 RBM6P78332 1123 aaKnown RBP31.2■■■□□ 2.59
SRM-201ENST00000376957 CABLES1Q8TDN4 633 aa31.2■■■□□ 2.59
SRM-201ENST00000376957 ATAD2Q6PL18 1390 aa31.19■■■□□ 2.58
SRM-201ENST00000376957 CABP1Q9NZU7 370 aa31.19■■■□□ 2.58
SRM-201ENST00000376957 BRD4O60885 1362 aaPredicted RBP31.18■■■□□ 2.58
SRM-201ENST00000376957 ALS2Q96Q42 1657 aa31.18■■■□□ 2.58
SRM-201ENST00000376957 ZNF692Q9BU19 519 aaPredicted RBP31.15■■■□□ 2.58
SRM-201ENST00000376957 ABTB2Q8N961 1025 aa31.14■■■□□ 2.58
SRM-201ENST00000376957 CDK12Q9NYV4 1490 aaPredicted RBP31.14■■■□□ 2.57
SRM-201ENST00000376957 UNC5CLQ8IV45 518 aa31.11■■■□□ 2.57
SRM-201ENST00000376957 NLRP13Q86W25 1043 aa31.1■■■□□ 2.57
SRM-201ENST00000376957 ABCA3Q99758 1704 aa31.1■■■□□ 2.57
SRM-201ENST00000376957 ST20-MTHFSA0A0A6YYL1 179 aa31.08■■■□□ 2.57
SRM-201ENST00000376957 PUS7Q96PZ0 661 aaKnown RBP31.08■■■□□ 2.57
SRM-201ENST00000376957 BCL9LQ86UU0 1499 aa31.08■■■□□ 2.57
SRM-201ENST00000376957 ATRNO75882 1429 aa31.07■■■□□ 2.56
SRM-201ENST00000376957 SLIT2O94813 1529 aa31.06■■■□□ 2.56
SRM-201ENST00000376957 USP6P35125 1406 aa31.06■■■□□ 2.56
SRM-201ENST00000376957 NUTM2GQ5VZR2 741 aa31.05■■■□□ 2.56
SRM-201ENST00000376957 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.04■■■□□ 2.56
SRM-201ENST00000376957 FAM83GA6ND36 823 aa31.04■■■□□ 2.56
SRM-201ENST00000376957 TMC1Q8TDI8 760 aa31.04■■■□□ 2.56
SRM-201ENST00000376957 GJD4Q96KN9 370 aaPredicted RBP31.04■■■□□ 2.56
SRM-201ENST00000376957 PRDM11Q9NQV5 511 aa31.04■■■□□ 2.56
SRM-201ENST00000376957 NWD2Q9ULI1 1742 aa31.03■■■□□ 2.56
SRM-201ENST00000376957 USP47Q96K76 1375 aa31.02■■■□□ 2.56
SRM-201ENST00000376957 HDGFL2Q7Z4V5 671 aaPredicted RBP31.01■■■□□ 2.55
SRM-201ENST00000376957 CCDC9Q9Y3X0 531 aaKnown RBP31.01■■■□□ 2.55
SRM-201ENST00000376957 PLCH1Q4KWH8 1693 aa31■■■□□ 2.55
SRM-201ENST00000376957 COL14A1Q05707 1796 aaKnown RBP31■■■□□ 2.55
SRM-201ENST00000376957 NLRP6P59044 892 aa30.99■■■□□ 2.55
SRM-201ENST00000376957 TMF1P82094 1093 aa30.99■■■□□ 2.55
SRM-201ENST00000376957 BTG4Q9NY30 223 aa30.99■■■□□ 2.55
SRM-201ENST00000376957 TERF2IPQ9NYB0 399 aa30.99■■■□□ 2.55
SRM-201ENST00000376957 KTN1Q86UP2 1357 aaKnown RBP30.99■■■□□ 2.55
SRM-201ENST00000376957 VPS72Q15906 364 aa30.98■■■□□ 2.55
SRM-201ENST00000376957 CDCA8Q53HL2 280 aa30.98■■■□□ 2.55
SRM-201ENST00000376957 TTC21AQ8NDW8 1320 aa30.98■■■□□ 2.55
SRM-201ENST00000376957 TESK2Q96S53 571 aa30.97■■■□□ 2.55
SRM-201ENST00000376957 CRYBG1Q9Y4K1 1723 aa30.97■■■□□ 2.55
SRM-201ENST00000376957 NINLQ9Y2I6 1382 aa30.96■■■□□ 2.55
SRM-201ENST00000376957 PHRF1Q9P1Y6 1649 aaKnown RBP30.95■■■□□ 2.55
SRM-201ENST00000376957 ZC3H6P61129 1189 aaKnown RBP30.95■■■□□ 2.55
SRM-201ENST00000376957 RGS12O14924 1447 aa30.95■■■□□ 2.54
SRM-201ENST00000376957 CPSF1Q10570 1443 aaKnown RBP30.95■■■□□ 2.54
SRM-201ENST00000376957 AKAP12Q02952 1782 aa30.94■■■□□ 2.54
SRM-201ENST00000376957 USP19O94966 1318 aa30.94■■■□□ 2.54
SRM-201ENST00000376957 TTC21BQ7Z4L5 1316 aa30.94■■■□□ 2.54
SRM-201ENST00000376957 KIAA0232Q92628 1395 aa30.93■■■□□ 2.54
SRM-201ENST00000376957 GCP02774 474 aa30.93■■■□□ 2.54
SRM-201ENST00000376957 SSH2Q76I76 1423 aa30.91■■■□□ 2.54
SRM-201ENST00000376957 SLC12A5Q9H2X9 1139 aa30.91■■■□□ 2.54
SRM-201ENST00000376957 KCNH5Q8NCM2 988 aa30.9■■■□□ 2.54
SRM-201ENST00000376957 EVA1CP58658 441 aa30.89■■■□□ 2.54
SRM-201ENST00000376957 CPDO75976 1380 aa30.89■■■□□ 2.54
SRM-201ENST00000376957 CHRNA2Q15822 529 aa30.87■■■□□ 2.53
SRM-201ENST00000376957 NRKQ7Z2Y5 1582 aa30.86■■■□□ 2.53
SRM-201ENST00000376957 MON2Q7Z3U7 1717 aa30.85■■■□□ 2.53
SRM-201ENST00000376957 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.85■■■□□ 2.53
SRM-201ENST00000376957 A0A0G2JS52 829 aa30.83■■■□□ 2.53
SRM-201ENST00000376957 MYT1Q01538 1121 aa30.83■■■□□ 2.53
SRM-201ENST00000376957 STRN4Q9NRL3 753 aa30.83■■■□□ 2.53
SRM-201ENST00000376957 PIK3C2AO00443 1686 aa30.83■■■□□ 2.53
SRM-201ENST00000376957 EDC4Q6P2E9 1401 aaKnown RBP30.82■■■□□ 2.52
SRM-201ENST00000376957 NRAPQ86VF7 1730 aa30.82■■■□□ 2.52
SRM-201ENST00000376957 GLI3P10071 1580 aa30.82■■■□□ 2.52
SRM-201ENST00000376957 ZBTB7CA1YPR0 619 aa30.81■■■□□ 2.52
SRM-201ENST00000376957 EIF4G2P78344 907 aaKnown RBP eCLIP30.81■■■□□ 2.52
SRM-201ENST00000376957 UPF1Q92900 1129 aaKnown RBP eCLIP30.8■■■□□ 2.52
SRM-201ENST00000376957 A0A1W2PP64 1363 aa30.79■■■□□ 2.52
SRM-201ENST00000376957 SLIT3O75094 1523 aa30.79■■■□□ 2.52
SRM-201ENST00000376957 CD163L1Q9NR16 1453 aa30.79■■■□□ 2.52
SRM-201ENST00000376957 ONECUT3O60422 494 aaPredicted RBP30.79■■■□□ 2.52
SRM-201ENST00000376957 SEPT12Q8IYM1 358 aa30.79■■■□□ 2.52
SRM-201ENST00000376957 SPATA31A5Q5VU36 1347 aa30.78■■■□□ 2.52
SRM-201ENST00000376957 SPATA31A7Q8IWB4 1347 aa30.78■■■□□ 2.52
SRM-201ENST00000376957 FAM98CQ17RN3 349 aaKnown RBP30.75■■■□□ 2.51
SRM-201ENST00000376957 AATKQ6ZMQ8 1374 aa30.75■■■□□ 2.51
SRM-201ENST00000376957 USP31Q70CQ4 1352 aa30.75■■■□□ 2.51
SRM-201ENST00000376957 SOX12O15370 315 aa30.74■■■□□ 2.51
SRM-201ENST00000376957 ANKRD36BQ8N2N9 1353 aa30.74■■■□□ 2.51
SRM-201ENST00000376957 NME9Q86XW9 330 aa30.73■■■□□ 2.51
SRM-201ENST00000376957 SPATA31A1Q5TZJ5 1347 aa30.73■■■□□ 2.51
SRM-201ENST00000376957 KRT27Q7Z3Y8 459 aa30.71■■■□□ 2.51
SRM-201ENST00000376957 CCDC125Q86Z20 511 aa30.71■■■□□ 2.51
SRM-201ENST00000376957 CAMTA1Q9Y6Y1 1673 aa30.71■■■□□ 2.51
SRM-201ENST00000376957 USP35Q9P2H5 1018 aa30.7■■■□□ 2.51
SRM-201ENST00000376957 LMO7Q8WWI1 1683 aa30.69■■■□□ 2.5
SRM-201ENST00000376957 ARHGEF25Q86VW2 580 aa30.69■■■□□ 2.5
SRM-201ENST00000376957 COG3Q96JB2 828 aa30.68■■■□□ 2.5
SRM-201ENST00000376957 THRAP3Q9Y2W1 955 aaKnown RBP30.68■■■□□ 2.5
SRM-201ENST00000376957 HSPA5P11021 654 aaKnown RBP30.66■■■□□ 2.5
SRM-201ENST00000376957 LARP1Q6PKG0 1096 aaKnown RBP30.66■■■□□ 2.5
SRM-201ENST00000376957 TCP11L2Q8N4U5 519 aa30.66■■■□□ 2.5
SRM-201ENST00000376957 USP54Q70EL1 1684 aa30.65■■■□□ 2.5
SRM-201ENST00000376957 COL5A2P05997 1499 aaPredicted RBP30.65■■■□□ 2.5
SRM-201ENST00000376957 BARGINQ6ZT62 677 aa30.65■■■□□ 2.5
SRM-201ENST00000376957 ZRANB1Q9UGI0 708 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms