RNA–Protein interactions for RNA: ENST00000376909.6

SSX9-201, Transcript of Protein SSX9, humanhuman

BASIC

Gene SSX9, Length 591 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-201ENST00000376909 RALBP1Q15311 655 aa10.59□□□□□ -0.71
SSX9-201ENST00000376909 HDGFL2Q7Z4V5 671 aaPredicted RBP10.59□□□□□ -0.71
SSX9-201ENST00000376909 PROSER2Q86WR7 435 aaPredicted RBP10.59□□□□□ -0.71
SSX9-201ENST00000376909 CARD14Q9BXL6 1004 aa10.59□□□□□ -0.71
SSX9-201ENST00000376909 CCDC61Q9Y6R9 512 aa10.59□□□□□ -0.71
SSX9-201ENST00000376909 KTN1Q86UP2 1357 aaKnown RBP10.59□□□□□ -0.71
SSX9-201ENST00000376909 ANKRD36BQ8N2N9 1353 aa10.59□□□□□ -0.71
SSX9-201ENST00000376909 NWD1Q149M9 1564 aa10.59□□□□□ -0.71
SSX9-201ENST00000376909 MYOM1P52179 1685 aa10.59□□□□□ -0.71
SSX9-201ENST00000376909 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.58□□□□□ -0.72
SSX9-201ENST00000376909 AMER1Q5JTC6 1135 aaPredicted RBP10.58□□□□□ -0.72
SSX9-201ENST00000376909 C14orf37Q86TY3 774 aa10.58□□□□□ -0.72
SSX9-201ENST00000376909 NKTRP30414 1462 aaKnown RBP10.57□□□□□ -0.72
SSX9-201ENST00000376909 CC2D1BQ5T0F9 858 aaKnown RBP10.57□□□□□ -0.72
SSX9-201ENST00000376909 RBM33Q96EV2 1170 aaKnown RBP10.57□□□□□ -0.72
SSX9-201ENST00000376909 PPIP5K1Q6PFW1 1433 aa10.57□□□□□ -0.72
SSX9-201ENST00000376909 NSD3Q9BZ95 1437 aa10.57□□□□□ -0.72
SSX9-201ENST00000376909 PRR36Q9H6K5 1346 aa10.57□□□□□ -0.72
SSX9-201ENST00000376909 NPC1L1Q9UHC9 1359 aa10.56□□□□□ -0.72
SSX9-201ENST00000376909 NUTM2FA1L443 756 aa10.56□□□□□ -0.72
SSX9-201ENST00000376909 GABBR2O75899 941 aa10.56□□□□□ -0.72
SSX9-201ENST00000376909 STRCQ7RTU9 1775 aa10.56□□□□□ -0.72
SSX9-201ENST00000376909 ADGRL3Q9HAR2 1447 aa10.56□□□□□ -0.72
SSX9-201ENST00000376909 ATP7BP35670 1465 aa10.55□□□□□ -0.72
SSX9-201ENST00000376909 A0A1W2PP64 1363 aa10.55□□□□□ -0.72
SSX9-201ENST00000376909 PARD3Q8TEW0 1356 aa10.55□□□□□ -0.72
SSX9-201ENST00000376909 PLEKHG3A1L390 1219 aa10.55□□□□□ -0.72
SSX9-201ENST00000376909 CGNL1Q0VF96 1302 aa10.55□□□□□ -0.72
SSX9-201ENST00000376909 MYBBP1AQ9BQG0 1328 aaKnown RBP10.55□□□□□ -0.72
SSX9-201ENST00000376909 ANKARQ7Z5J8 1434 aa10.54□□□□□ -0.72
SSX9-201ENST00000376909 NCOA3Q9Y6Q9 1424 aa10.54□□□□□ -0.72
SSX9-201ENST00000376909 CD163L1Q9NR16 1453 aa10.54□□□□□ -0.72
SSX9-201ENST00000376909 TMEM94Q12767 1356 aa10.53□□□□□ -0.72
SSX9-201ENST00000376909 NUBP1P53384 320 aa10.53□□□□□ -0.72
SSX9-201ENST00000376909 KLHL34Q8N239 644 aa10.53□□□□□ -0.72
SSX9-201ENST00000376909 C19orf44Q9H6X5 657 aa10.53□□□□□ -0.72
SSX9-201ENST00000376909 NSD2O96028 1365 aa10.52□□□□□ -0.72
SSX9-201ENST00000376909 CDC42BPGQ6DT37 1551 aa10.52□□□□□ -0.72
SSX9-201ENST00000376909 CPSF1Q10570 1443 aaKnown RBP10.52□□□□□ -0.73
SSX9-201ENST00000376909 MRS2Q9HD23 443 aa10.52□□□□□ -0.73
SSX9-201ENST00000376909 ACEP12821 1306 aa10.52□□□□□ -0.73
SSX9-201ENST00000376909 ZNF335Q9H4Z2 1342 aaPredicted RBP10.52□□□□□ -0.73
SSX9-201ENST00000376909 MORC1Q86VD1 984 aa10.51□□□□□ -0.73
SSX9-201ENST00000376909 NLRP13Q86W25 1043 aa10.51□□□□□ -0.73
SSX9-201ENST00000376909 NGDNQ8NEJ9 315 aaKnown RBP10.51□□□□□ -0.73
SSX9-201ENST00000376909 PMFBP1Q8TBY8 1022 aa10.51□□□□□ -0.73
SSX9-201ENST00000376909 TSPYL2Q9H2G4 693 aaPredicted RBP10.51□□□□□ -0.73
SSX9-201ENST00000376909 NALCNQ8IZF0 1738 aa10.5□□□□□ -0.73
SSX9-201ENST00000376909 ATF3P18847 181 aa10.5□□□□□ -0.73
SSX9-201ENST00000376909 CCDC184Q52MB2 194 aa10.5□□□□□ -0.73
SSX9-201ENST00000376909 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.5□□□□□ -0.73
SSX9-201ENST00000376909 RASEFQ8IZ41 740 aa10.5□□□□□ -0.73
SSX9-201ENST00000376909 FAM212AQ96EL1 285 aa10.5□□□□□ -0.73
SSX9-201ENST00000376909 PHF8Q9UPP1 1060 aa10.5□□□□□ -0.73
SSX9-201ENST00000376909 BRD4O60885 1362 aaPredicted RBP10.5□□□□□ -0.73
SSX9-201ENST00000376909 EDC4Q6P2E9 1401 aaKnown RBP10.5□□□□□ -0.73
SSX9-201ENST00000376909 USP32Q8NFA0 1604 aa10.49□□□□□ -0.73
SSX9-201ENST00000376909 FYB1O15117 783 aa10.49□□□□□ -0.73
SSX9-201ENST00000376909 PPP2R1AP30153 589 aa10.49□□□□□ -0.73
SSX9-201ENST00000376909 ESCO1Q5FWF5 840 aa10.49□□□□□ -0.73
SSX9-201ENST00000376909 CADPS2Q86UW7 1296 aa10.49□□□□□ -0.73
SSX9-201ENST00000376909 FMN2Q9NZ56 1722 aa10.49□□□□□ -0.73
SSX9-201ENST00000376909 POLR3AO14802 1390 aaPredicted RBP10.49□□□□□ -0.73
SSX9-201ENST00000376909 MSH6P52701 1360 aa10.49□□□□□ -0.73
SSX9-201ENST00000376909 DCCP43146 1447 aa10.49□□□□□ -0.73
SSX9-201ENST00000376909 LRRC7Q96NW7 1537 aa10.48□□□□□ -0.73
SSX9-201ENST00000376909 TOPAZ1Q8N9V7 1692 aa10.48□□□□□ -0.73
SSX9-201ENST00000376909 STRCP1A6NGW2 1772 aa10.48□□□□□ -0.73
SSX9-201ENST00000376909 GGNBP2Q9H3C7 697 aa10.48□□□□□ -0.73
SSX9-201ENST00000376909 YTHDC1Q96MU7 727 aaKnown RBP10.47□□□□□ -0.73
SSX9-201ENST00000376909 TTC21BQ7Z4L5 1316 aa10.47□□□□□ -0.73
SSX9-201ENST00000376909 USP6P35125 1406 aa10.47□□□□□ -0.73
SSX9-201ENST00000376909 TNNT2P45379 298 aaPredicted RBP10.46□□□□□ -0.73
SSX9-201ENST00000376909 NME9Q86XW9 330 aa10.46□□□□□ -0.73
SSX9-201ENST00000376909 ORAI2Q96SN7 254 aa10.46□□□□□ -0.73
SSX9-201ENST00000376909 TTC21AQ8NDW8 1320 aa10.46□□□□□ -0.73
SSX9-201ENST00000376909 C1orf167Q5SNV9 1468 aa10.46□□□□□ -0.74
SSX9-201ENST00000376909 ITSN1Q15811 1721 aa10.46□□□□□ -0.74
SSX9-201ENST00000376909 IFNLR1Q8IU57 520 aaPredicted RBP10.45□□□□□ -0.74
SSX9-201ENST00000376909 COG3Q96JB2 828 aa10.45□□□□□ -0.74
SSX9-201ENST00000376909 MST1RQ04912 1400 aa10.44□□□□□ -0.74
SSX9-201ENST00000376909 SSH2Q76I76 1423 aa10.44□□□□□ -0.74
SSX9-201ENST00000376909 PSME1Q06323 249 aa10.44□□□□□ -0.74
SSX9-201ENST00000376909 GSE1Q14687 1217 aa10.44□□□□□ -0.74
SSX9-201ENST00000376909 FAM9BQ8IZU0 186 aa10.44□□□□□ -0.74
SSX9-201ENST00000376909 PNISRQ8TF01 805 aaKnown RBP10.44□□□□□ -0.74
SSX9-201ENST00000376909 SPOCK2Q92563 424 aa10.44□□□□□ -0.74
SSX9-201ENST00000376909 PHF12Q96QT6 1004 aa10.44□□□□□ -0.74
SSX9-201ENST00000376909 AKAP12Q02952 1782 aa10.44□□□□□ -0.74
SSX9-201ENST00000376909 SGIP1Q9BQI5 828 aa10.43□□□□□ -0.74
SSX9-201ENST00000376909 MON2Q7Z3U7 1717 aa10.43□□□□□ -0.74
SSX9-201ENST00000376909 FOXO3O43524 673 aa10.42□□□□□ -0.74
SSX9-201ENST00000376909 MTHFSP49914 203 aa10.42□□□□□ -0.74
SSX9-201ENST00000376909 CFAP53Q96M91 514 aa10.42□□□□□ -0.74
SSX9-201ENST00000376909 DCAF8Q5TAQ9 597 aa10.41□□□□□ -0.74
SSX9-201ENST00000376909 SLAIN2Q9P270 581 aa10.41□□□□□ -0.74
SSX9-201ENST00000376909 RGPD8O14715 1765 aaPredicted RBP10.41□□□□□ -0.74
SSX9-201ENST00000376909 USP31Q70CQ4 1352 aa10.4□□□□□ -0.74
SSX9-201ENST00000376909 NRKQ7Z2Y5 1582 aa10.4□□□□□ -0.74
SSX9-201ENST00000376909 NLRP6P59044 892 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms