RNA–Protein interactions for RNA: ENST00000376862.3

SYNDIG1-201, Transcript of synapse differentiation inducing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNDIG1, Length 2,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1-201ENST00000376862 NOB1Q9ULX3 412 aaKnown RBP27.38■■□□□ 1.97
SYNDIG1-201ENST00000376862 ZBTB40Q9NUA8 1239 aa27.38■■□□□ 1.97
SYNDIG1-201ENST00000376862 SLC24A1O60721 1099 aa27.37■■□□□ 1.97
SYNDIG1-201ENST00000376862 XPCQ01831 940 aaPredicted RBP27.37■■□□□ 1.97
SYNDIG1-201ENST00000376862 CLEC17AQ6ZS10 378 aa27.37■■□□□ 1.97
SYNDIG1-201ENST00000376862 CHD1LQ86WJ1 897 aa27.37■■□□□ 1.97
SYNDIG1-201ENST00000376862 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.37■■□□□ 1.97
SYNDIG1-201ENST00000376862 AFAP1Q8N556 730 aa27.36■■□□□ 1.97
SYNDIG1-201ENST00000376862 MAP7D2Q96T17 732 aa27.36■■□□□ 1.97
SYNDIG1-201ENST00000376862 CT47B1P0C2W7 299 aaPredicted RBP27.35■■□□□ 1.97
SYNDIG1-201ENST00000376862 ABCA6Q8N139 1617 aa27.35■■□□□ 1.97
SYNDIG1-201ENST00000376862 UQCRHLA0A096LP55 91 aa27.35■■□□□ 1.97
SYNDIG1-201ENST00000376862 UQCRHP07919 91 aa27.35■■□□□ 1.97
SYNDIG1-201ENST00000376862 ZNF445P59923 1031 aa27.35■■□□□ 1.97
SYNDIG1-201ENST00000376862 BMP2KLQ5H9B9 411 aa27.35■■□□□ 1.97
SYNDIG1-201ENST00000376862 NOL7Q9UMY1 257 aaKnown RBP27.35■■□□□ 1.97
SYNDIG1-201ENST00000376862 CFAP74Q9C0B2 1584 aa27.35■■□□□ 1.97
SYNDIG1-201ENST00000376862 U2AF1L5P0DN76 240 aaPredicted RBP27.34■■□□□ 1.97
SYNDIG1-201ENST00000376862 U2AF1Q01081 240 aaKnown RBP eCLIP27.34■■□□□ 1.97
SYNDIG1-201ENST00000376862 PTPRTO14522 1441 aa27.34■■□□□ 1.97
SYNDIG1-201ENST00000376862 NCLP19338 710 aaKnown RBP27.34■■□□□ 1.97
SYNDIG1-201ENST00000376862 CFAP53Q96M91 514 aa27.34■■□□□ 1.97
SYNDIG1-201ENST00000376862 ZNF500O60304 480 aaPredicted RBP27.33■■□□□ 1.97
SYNDIG1-201ENST00000376862 HS1BP3Q53T59 392 aa27.33■■□□□ 1.97
SYNDIG1-201ENST00000376862 CAVIN1Q6NZI2 390 aaKnown RBP27.33■■□□□ 1.97
SYNDIG1-201ENST00000376862 RBSNQ9H1K0 784 aa27.33■■□□□ 1.97
SYNDIG1-201ENST00000376862 SLC12A5Q9H2X9 1139 aa27.33■■□□□ 1.97
SYNDIG1-201ENST00000376862 PODXL2Q9NZ53 605 aa27.33■■□□□ 1.97
SYNDIG1-201ENST00000376862 ZSCAN23Q3MJ62 389 aa27.32■■□□□ 1.96
SYNDIG1-201ENST00000376862 MCTP1Q6DN14 999 aa27.32■■□□□ 1.96
SYNDIG1-201ENST00000376862 SPAG9O60271 1321 aaKnown RBP27.32■■□□□ 1.96
SYNDIG1-201ENST00000376862 ARID3AQ99856 593 aa27.32■■□□□ 1.96
SYNDIG1-201ENST00000376862 ADGRB2O60241 1585 aa27.31■■□□□ 1.96
SYNDIG1-201ENST00000376862 ADGRF5Q8IZF2 1346 aa27.31■■□□□ 1.96
SYNDIG1-201ENST00000376862 TBC1D9Q6ZT07 1266 aa27.31■■□□□ 1.96
SYNDIG1-201ENST00000376862 PDLIM2Q96JY6 352 aa27.3■■□□□ 1.96
SYNDIG1-201ENST00000376862 MAP3K4Q9Y6R4 1608 aa27.29■■□□□ 1.96
SYNDIG1-201ENST00000376862 ARHGAP31Q2M1Z3 1444 aa27.28■■□□□ 1.96
SYNDIG1-201ENST00000376862 NCBP3Q53F19 620 aaKnown RBP27.28■■□□□ 1.96
SYNDIG1-201ENST00000376862 ANKRD45Q5TZF3 282 aa27.27■■□□□ 1.96
SYNDIG1-201ENST00000376862 NOS1P29475 1434 aa27.27■■□□□ 1.96
SYNDIG1-201ENST00000376862 LMBRD1Q9NUN5 540 aa27.26■■□□□ 1.95
SYNDIG1-201ENST00000376862 MYO3AQ8NEV4 1616 aa27.26■■□□□ 1.95
SYNDIG1-201ENST00000376862 PRIM1P49642 420 aaKnown RBP27.26■■□□□ 1.95
SYNDIG1-201ENST00000376862 ZKSCAN5Q9Y2L8 839 aa27.24■■□□□ 1.95
SYNDIG1-201ENST00000376862 ADGRL1O94910 1474 aa27.24■■□□□ 1.95
SYNDIG1-201ENST00000376862 CD109Q6YHK3 1445 aa27.23■■□□□ 1.95
SYNDIG1-201ENST00000376862 TRIM35Q9UPQ4 493 aa27.23■■□□□ 1.95
SYNDIG1-201ENST00000376862 SBNO2Q9Y2G9 1366 aa27.23■■□□□ 1.95
SYNDIG1-201ENST00000376862 RBM27Q9P2N5 1060 aaKnown RBP27.22■■□□□ 1.95
SYNDIG1-201ENST00000376862 PKP1Q13835 747 aa27.22■■□□□ 1.95
SYNDIG1-201ENST00000376862 KIF16BQ96L93 1317 aa27.22■■□□□ 1.95
SYNDIG1-201ENST00000376862 FANCAO15360 1455 aa27.21■■□□□ 1.95
SYNDIG1-201ENST00000376862 DYNC1I1O14576 645 aa27.21■■□□□ 1.95
SYNDIG1-201ENST00000376862 SMAP1Q8IYB5 467 aaPredicted RBP27.21■■□□□ 1.95
SYNDIG1-201ENST00000376862 ZFYVE16Q7Z3T8 1539 aa27.21■■□□□ 1.95
SYNDIG1-201ENST00000376862 MYOM2P54296 1465 aa27.21■■□□□ 1.95
SYNDIG1-201ENST00000376862 TMPOP42166 694 aaKnown RBP27.2■■□□□ 1.95
SYNDIG1-201ENST00000376862 ARAP3Q8WWN8 1544 aa27.2■■□□□ 1.94
SYNDIG1-201ENST00000376862 UGGT1Q9NYU2 1555 aa27.2■■□□□ 1.94
SYNDIG1-201ENST00000376862 ABCC11Q96J66 1382 aa27.19■■□□□ 1.94
SYNDIG1-201ENST00000376862 PPIP5K1Q6PFW1 1433 aa27.19■■□□□ 1.94
SYNDIG1-201ENST00000376862 IPO8O15397 1037 aaKnown RBP27.19■■□□□ 1.94
SYNDIG1-201ENST00000376862 USP32Q8NFA0 1604 aa27.19■■□□□ 1.94
SYNDIG1-201ENST00000376862 CYP2E1P05181 493 aaPredicted RBP27.19■■□□□ 1.94
SYNDIG1-201ENST00000376862 CSPP1Q1MSJ5 1256 aa27.19■■□□□ 1.94
SYNDIG1-201ENST00000376862 C1orf115Q9H7X2 142 aa27.19■■□□□ 1.94
SYNDIG1-201ENST00000376862 NUCB2P80303 420 aa27.18■■□□□ 1.94
SYNDIG1-201ENST00000376862 GPT2Q8TD30 523 aa27.18■■□□□ 1.94
SYNDIG1-201ENST00000376862 PRDM10Q9NQV6 1147 aa27.18■■□□□ 1.94
SYNDIG1-201ENST00000376862 TET3O43151 1660 aa27.17■■□□□ 1.94
SYNDIG1-201ENST00000376862 MTERF4Q7Z6M4 381 aaKnown RBP27.17■■□□□ 1.94
SYNDIG1-201ENST00000376862 PRPF40AO75400 957 aaKnown RBP27.17■■□□□ 1.94
SYNDIG1-201ENST00000376862 PLEKHF1Q96S99 279 aa27.17■■□□□ 1.94
SYNDIG1-201ENST00000376862 U2SURPO15042 1029 aaKnown RBP27.16■■□□□ 1.94
SYNDIG1-201ENST00000376862 SASS6Q6UVJ0 657 aa27.16■■□□□ 1.94
SYNDIG1-201ENST00000376862 TRAK1Q9UPV9 953 aa27.16■■□□□ 1.94
SYNDIG1-201ENST00000376862 GCC1Q96CN9 775 aa27.16■■□□□ 1.94
SYNDIG1-201ENST00000376862 CDC45O75419 566 aa27.15■■□□□ 1.94
SYNDIG1-201ENST00000376862 ASXL2Q76L83 1435 aa27.14■■□□□ 1.94
SYNDIG1-201ENST00000376862 ZC3H13Q5T200 1668 aaKnown RBP27.14■■□□□ 1.94
SYNDIG1-201ENST00000376862 ABCA9Q8IUA7 1624 aa27.14■■□□□ 1.94
SYNDIG1-201ENST00000376862 PPRC1Q5VV67 1664 aaKnown RBP27.14■■□□□ 1.93
SYNDIG1-201ENST00000376862 QRICH2Q9H0J4 1663 aa27.14■■□□□ 1.93
SYNDIG1-201ENST00000376862 MCM5P33992 734 aa27.14■■□□□ 1.93
SYNDIG1-201ENST00000376862 RABEP1Q15276 862 aa27.13■■□□□ 1.93
SYNDIG1-201ENST00000376862 PLEKHG5O94827 1062 aa27.13■■□□□ 1.93
SYNDIG1-201ENST00000376862 CCDC39Q9UFE4 941 aa27.13■■□□□ 1.93
SYNDIG1-201ENST00000376862 IFT172Q9UG01 1749 aa27.12■■□□□ 1.93
SYNDIG1-201ENST00000376862 ATP7AQ04656 1500 aa27.12■■□□□ 1.93
SYNDIG1-201ENST00000376862 DEPDC5O75140 1603 aa27.11■■□□□ 1.93
SYNDIG1-201ENST00000376862 ZBTB7BO15156 539 aaPredicted RBP27.11■■□□□ 1.93
SYNDIG1-201ENST00000376862 LRSAM1Q6UWE0 723 aa27.11■■□□□ 1.93
SYNDIG1-201ENST00000376862 CHAMP1Q96JM3 812 aa27.11■■□□□ 1.93
SYNDIG1-201ENST00000376862 TMEM63CQ9P1W3 806 aa27.11■■□□□ 1.93
SYNDIG1-201ENST00000376862 MED14O60244 1454 aa27.11■■□□□ 1.93
SYNDIG1-201ENST00000376862 NEURL4Q96JN8 1562 aa27.11■■□□□ 1.93
SYNDIG1-201ENST00000376862 SYCE3A1L190 88 aa27.1■■□□□ 1.93
SYNDIG1-201ENST00000376862 KIF3BO15066 747 aa27.1■■□□□ 1.93
SYNDIG1-201ENST00000376862 ZHX1Q9UKY1 873 aaPredicted RBP27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms