RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 ITSN1Q15811 1721 aa21.81■■□□□ 1.08
CLCN6-204ENST00000376491 NUDT16Q96DE0 195 aaKnown RBP21.81■■□□□ 1.08
CLCN6-204ENST00000376491 BTG4Q9NY30 223 aa21.81■■□□□ 1.08
CLCN6-204ENST00000376491 DEFB132Q7Z7B7 95 aa21.8■■□□□ 1.08
CLCN6-204ENST00000376491 PAK3O75914 559 aaPredicted RBP21.79■■□□□ 1.08
CLCN6-204ENST00000376491 KRT27Q7Z3Y8 459 aa21.79■■□□□ 1.08
CLCN6-204ENST00000376491 KIAA1210Q9ULL0 1709 aa21.79■■□□□ 1.08
CLCN6-204ENST00000376491 CDK19Q9BWU1 502 aa21.77■■□□□ 1.08
CLCN6-204ENST00000376491 SRCAPQ6ZRS2 3230 aa21.76■■□□□ 1.07
CLCN6-204ENST00000376491 FAM98CQ17RN3 349 aaKnown RBP21.76■■□□□ 1.07
CLCN6-204ENST00000376491 TOPAZ1Q8N9V7 1692 aa21.75■■□□□ 1.07
CLCN6-204ENST00000376491 NBPF1Q3BBV0 1214 aa21.75■■□□□ 1.07
CLCN6-204ENST00000376491 A0A0G2JS52 829 aa21.73■■□□□ 1.07
CLCN6-204ENST00000376491 MYT1Q01538 1121 aa21.73■■□□□ 1.07
CLCN6-204ENST00000376491 PRDM11Q9NQV5 511 aa21.73■■□□□ 1.07
CLCN6-204ENST00000376491 SPATA31A5Q5VU36 1347 aa21.73■■□□□ 1.07
CLCN6-204ENST00000376491 SPATA31A7Q8IWB4 1347 aa21.73■■□□□ 1.07
CLCN6-204ENST00000376491 POLR3AO14802 1390 aaPredicted RBP21.73■■□□□ 1.07
CLCN6-204ENST00000376491 PHRF1Q9P1Y6 1649 aaKnown RBP21.73■■□□□ 1.07
CLCN6-204ENST00000376491 SF3B2Q13435 895 aaKnown RBP21.72■■□□□ 1.07
CLCN6-204ENST00000376491 NUTM2GQ5VZR2 741 aa21.71■■□□□ 1.07
CLCN6-204ENST00000376491 CCDC61Q9Y6R9 512 aa21.71■■□□□ 1.07
CLCN6-204ENST00000376491 ACEP12821 1306 aa21.71■■□□□ 1.07
CLCN6-204ENST00000376491 KIAA0232Q92628 1395 aa21.71■■□□□ 1.07
CLCN6-204ENST00000376491 PLEKHG3A1L390 1219 aa21.7■■□□□ 1.06
CLCN6-204ENST00000376491 NBPF8Q3BBV2 869 aa21.7■■□□□ 1.06
CLCN6-204ENST00000376491 THSD7AQ9UPZ6 1657 aa21.69■■□□□ 1.06
CLCN6-204ENST00000376491 CHRNA2Q15822 529 aa21.69■■□□□ 1.06
CLCN6-204ENST00000376491 ZC3H6P61129 1189 aaKnown RBP21.67■■□□□ 1.06
CLCN6-204ENST00000376491 FAM182BQ5T319 152 aa21.67■■□□□ 1.06
CLCN6-204ENST00000376491 SPATA31A1Q5TZJ5 1347 aa21.66■■□□□ 1.06
CLCN6-204ENST00000376491 STRN4Q9NRL3 753 aa21.64■■□□□ 1.05
CLCN6-204ENST00000376491 NRKQ7Z2Y5 1582 aa21.64■■□□□ 1.05
CLCN6-204ENST00000376491 CENPJQ9HC77 1338 aaPredicted RBP21.63■■□□□ 1.05
CLCN6-204ENST00000376491 BAG6P46379 1132 aa21.63■■□□□ 1.05
CLCN6-204ENST00000376491 CABP2Q9NPB3 220 aa21.63■■□□□ 1.05
CLCN6-204ENST00000376491 RGPD1P0DJD0 1748 aa21.63■■□□□ 1.05
CLCN6-204ENST00000376491 SRPK2P78362 688 aaKnown RBP21.62■■□□□ 1.05
CLCN6-204ENST00000376491 ABTB2Q8N961 1025 aa21.62■■□□□ 1.05
CLCN6-204ENST00000376491 QRICH2Q9H0J4 1663 aa21.62■■□□□ 1.05
CLCN6-204ENST00000376491 PPIP5K1Q6PFW1 1433 aa21.62■■□□□ 1.05
CLCN6-204ENST00000376491 USP19O94966 1318 aa21.6■■□□□ 1.05
CLCN6-204ENST00000376491 CAMTA1Q9Y6Y1 1673 aa21.6■■□□□ 1.05
CLCN6-204ENST00000376491 EN1Q05925 392 aaPredicted RBP21.6■■□□□ 1.05
CLCN6-204ENST00000376491 L3MBTL2Q969R5 705 aa21.6■■□□□ 1.05
CLCN6-204ENST00000376491 TNS1Q9HBL0 1735 aaKnown RBP21.6■■□□□ 1.05
CLCN6-204ENST00000376491 LMO7Q8WWI1 1683 aa21.6■■□□□ 1.05
CLCN6-204ENST00000376491 SSH2Q76I76 1423 aa21.59■■□□□ 1.05
CLCN6-204ENST00000376491 CPDO75976 1380 aa21.58■■□□□ 1.04
CLCN6-204ENST00000376491 SIN3AQ96ST3 1273 aa21.57■■□□□ 1.04
CLCN6-204ENST00000376491 USP35Q9P2H5 1018 aa21.57■■□□□ 1.04
CLCN6-204ENST00000376491 PSDA5PKW4 1024 aaPredicted RBP21.56■■□□□ 1.04
CLCN6-204ENST00000376491 EVA1CP58658 441 aa21.56■■□□□ 1.04
CLCN6-204ENST00000376491 LARP1Q6PKG0 1096 aaKnown RBP21.56■■□□□ 1.04
CLCN6-204ENST00000376491 NLRP13Q86W25 1043 aa21.56■■□□□ 1.04
CLCN6-204ENST00000376491 DISP2A7MBM2 1401 aa21.55■■□□□ 1.04
CLCN6-204ENST00000376491 GCP02774 474 aa21.55■■□□□ 1.04
CLCN6-204ENST00000376491 BARGINQ6ZT62 677 aa21.55■■□□□ 1.04
CLCN6-204ENST00000376491 CABP1Q9NZU7 370 aa21.55■■□□□ 1.04
CLCN6-204ENST00000376491 TRPM1Q7Z4N2 1603 aa21.55■■□□□ 1.04
CLCN6-204ENST00000376491 LRP5O75197 1615 aa21.54■■□□□ 1.04
CLCN6-204ENST00000376491 TRIM37O94972 964 aa21.53■■□□□ 1.04
CLCN6-204ENST00000376491 FAM196AQ6ZSG2 479 aa21.53■■□□□ 1.04
CLCN6-204ENST00000376491 USP6P35125 1406 aa21.53■■□□□ 1.04
CLCN6-204ENST00000376491 BRD4O60885 1362 aaPredicted RBP21.52■■□□□ 1.04
CLCN6-204ENST00000376491 EZH2Q15910 746 aaKnown RBP21.51■■□□□ 1.03
CLCN6-204ENST00000376491 TCP11L2Q8N4U5 519 aa21.51■■□□□ 1.03
CLCN6-204ENST00000376491 COL5A2P05997 1499 aaPredicted RBP21.5■■□□□ 1.03
CLCN6-204ENST00000376491 NLRP6P59044 892 aa21.49■■□□□ 1.03
CLCN6-204ENST00000376491 CAMKK2Q96RR4 588 aa21.49■■□□□ 1.03
CLCN6-204ENST00000376491 SLIT3O75094 1523 aa21.49■■□□□ 1.03
CLCN6-204ENST00000376491 PIK3C2AO00443 1686 aa21.48■■□□□ 1.03
CLCN6-204ENST00000376491 PDE3BQ13370 1112 aa21.48■■□□□ 1.03
CLCN6-204ENST00000376491 NEUROD1Q13562 356 aa21.48■■□□□ 1.03
CLCN6-204ENST00000376491 EVC2Q86UK5 1308 aa21.48■■□□□ 1.03
CLCN6-204ENST00000376491 R3HDM1Q15032 1099 aaKnown RBP21.47■■□□□ 1.03
CLCN6-204ENST00000376491 COL18A1P39060 1754 aa21.46■■□□□ 1.03
CLCN6-204ENST00000376491 THRAP3Q9Y2W1 955 aaKnown RBP21.46■■□□□ 1.03
CLCN6-204ENST00000376491 ROCK2O75116 1388 aaKnown RBP21.46■■□□□ 1.03
CLCN6-204ENST00000376491 PARP4Q9UKK3 1724 aaKnown RBP21.46■■□□□ 1.03
CLCN6-204ENST00000376491 ZBTB7CA1YPR0 619 aa21.45■■□□□ 1.02
CLCN6-204ENST00000376491 APBA3O96018 575 aa21.45■■□□□ 1.02
CLCN6-204ENST00000376491 AKAP12Q02952 1782 aa21.45■■□□□ 1.02
CLCN6-204ENST00000376491 AATKQ6ZMQ8 1374 aa21.45■■□□□ 1.02
CLCN6-204ENST00000376491 CRB1P82279 1406 aa21.44■■□□□ 1.02
CLCN6-204ENST00000376491 RREB1Q92766 1687 aa21.43■■□□□ 1.02
CLCN6-204ENST00000376491 TTC21BQ7Z4L5 1316 aa21.42■■□□□ 1.02
CLCN6-204ENST00000376491 AXIN2Q9Y2T1 843 aa21.41■■□□□ 1.02
CLCN6-204ENST00000376491 RGPD5Q99666 1765 aa21.41■■□□□ 1.02
CLCN6-204ENST00000376491 PARD3Q8TEW0 1356 aa21.4■■□□□ 1.02
CLCN6-204ENST00000376491 ZNF692Q9BU19 519 aaPredicted RBP21.4■■□□□ 1.02
CLCN6-204ENST00000376491 NUP188Q5SRE5 1749 aa21.4■■□□□ 1.02
CLCN6-204ENST00000376491 PEAK1Q9H792 1746 aa21.39■■□□□ 1.01
CLCN6-204ENST00000376491 LRRC37A3O60309 1634 aa21.39■■□□□ 1.01
CLCN6-204ENST00000376491 CPSF1Q10570 1443 aaKnown RBP21.38■■□□□ 1.01
CLCN6-204ENST00000376491 SBF2Q86WG5 1849 aa21.38■■□□□ 1.01
CLCN6-204ENST00000376491 WNK3Q9BYP7 1800 aa21.37■■□□□ 1.01
CLCN6-204ENST00000376491 TOM1L2Q6ZVM7 507 aa21.37■■□□□ 1.01
CLCN6-204ENST00000376491 ARHGEF25Q86VW2 580 aa21.37■■□□□ 1.01
CLCN6-204ENST00000376491 WDR17Q8IZU2 1322 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms