RNA–Protein interactions for RNA: ENST00000376285.5

PCCA-202, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCCA, Length 2,494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-202ENST00000376285 RIMS1Q86UR5 1692 aaKnown RBP23.85■■□□□ 1.41
PCCA-202ENST00000376285 IQSEC2Q5JU85 1478 aa23.85■■□□□ 1.41
PCCA-202ENST00000376285 CPSF1Q10570 1443 aaKnown RBP23.84■■□□□ 1.41
PCCA-202ENST00000376285 ITSN1Q15811 1721 aa23.84■■□□□ 1.41
PCCA-202ENST00000376285 PDE4AP27815 886 aa23.84■■□□□ 1.41
PCCA-202ENST00000376285 CDC42BPGQ6DT37 1551 aa23.84■■□□□ 1.41
PCCA-202ENST00000376285 BCAR3O75815 825 aa23.84■■□□□ 1.41
PCCA-202ENST00000376285 COL3A1P02461 1466 aaPredicted RBP23.83■■□□□ 1.41
PCCA-202ENST00000376285 NOP58Q9Y2X3 529 aaKnown RBP23.83■■□□□ 1.41
PCCA-202ENST00000376285 SKAP1Q86WV1 359 aa23.83■■□□□ 1.4
PCCA-202ENST00000376285 PTPRUQ92729 1446 aa23.82■■□□□ 1.4
PCCA-202ENST00000376285 BACH2Q9BYV9 841 aa23.82■■□□□ 1.4
PCCA-202ENST00000376285 TCP11L2Q8N4U5 519 aa23.82■■□□□ 1.4
PCCA-202ENST00000376285 IPO9Q96P70 1041 aaKnown RBP23.82■■□□□ 1.4
PCCA-202ENST00000376285 NUDT16Q96DE0 195 aaKnown RBP23.81■■□□□ 1.4
PCCA-202ENST00000376285 MAP2P11137 1827 aaKnown RBP23.8■■□□□ 1.4
PCCA-202ENST00000376285 NEUROD2Q15784 382 aa23.8■■□□□ 1.4
PCCA-202ENST00000376285 SLC26A8Q96RN1 970 aa23.8■■□□□ 1.4
PCCA-202ENST00000376285 PHF23Q9BUL5 403 aaPredicted RBP23.8■■□□□ 1.4
PCCA-202ENST00000376285 RRP7AQ9Y3A4 280 aaKnown RBP23.8■■□□□ 1.4
PCCA-202ENST00000376285 DIP2AQ14689 1571 aa23.8■■□□□ 1.4
PCCA-202ENST00000376285 CEP170BQ9Y4F5 1589 aaPredicted RBP23.8■■□□□ 1.4
PCCA-202ENST00000376285 PAK3O75914 559 aaPredicted RBP23.79■■□□□ 1.4
PCCA-202ENST00000376285 THEMISQ8N1K5 641 aaPredicted RBP23.79■■□□□ 1.4
PCCA-202ENST00000376285 TOPAZ1Q8N9V7 1692 aa23.79■■□□□ 1.4
PCCA-202ENST00000376285 EDC4Q6P2E9 1401 aaKnown RBP23.79■■□□□ 1.4
PCCA-202ENST00000376285 CENPQQ7L2Z9 268 aaPredicted RBP23.79■■□□□ 1.4
PCCA-202ENST00000376285 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.78■■□□□ 1.41e-6■■□□□ 13.6
PCCA-202ENST00000376285 CCDC61Q9Y6R9 512 aa23.77■■□□□ 1.4
PCCA-202ENST00000376285 NCKAP5LQ9HCH0 1330 aa23.76■■□□□ 1.39
PCCA-202ENST00000376285 DEKP35659 375 aaKnown RBP23.76■■□□□ 1.39
PCCA-202ENST00000376285 PRR36Q9H6K5 1346 aa23.76■■□□□ 1.39
PCCA-202ENST00000376285 TBX22Q9Y458 520 aa23.75■■□□□ 1.39
PCCA-202ENST00000376285 ADAMTSL3P82987 1691 aa23.74■■□□□ 1.39
PCCA-202ENST00000376285 U2AF1L5P0DN76 240 aaPredicted RBP23.74■■□□□ 1.39
PCCA-202ENST00000376285 U2AF1Q01081 240 aaKnown RBP eCLIP23.74■■□□□ 1.391e-7■■■■■ 30.6
PCCA-202ENST00000376285 PNPLA6Q8IY17 1366 aa23.74■■□□□ 1.39
PCCA-202ENST00000376285 CCDC27Q2M243 656 aa23.73■■□□□ 1.39
PCCA-202ENST00000376285 WDR63Q8IWG1 891 aa23.73■■□□□ 1.39
PCCA-202ENST00000376285 XRN1Q8IZH2 1706 aaKnown RBP23.73■■□□□ 1.39
PCCA-202ENST00000376285 PTCH1Q13635 1447 aa23.73■■□□□ 1.39
PCCA-202ENST00000376285 ZNF142P52746 1687 aaPredicted RBP23.72■■□□□ 1.39
PCCA-202ENST00000376285 NRKQ7Z2Y5 1582 aa23.72■■□□□ 1.39
PCCA-202ENST00000376285 AMOTL2Q9Y2J4 779 aa23.71■■□□□ 1.39
PCCA-202ENST00000376285 PDE3AQ14432 1141 aa23.7■■□□□ 1.38
PCCA-202ENST00000376285 NPM2Q86SE8 214 aaKnown RBP23.7■■□□□ 1.38
PCCA-202ENST00000376285 NBR1Q14596 966 aa23.7■■□□□ 1.38
PCCA-202ENST00000376285 NCBP3Q53F19 620 aaKnown RBP23.7■■□□□ 1.38
PCCA-202ENST00000376285 NME9Q86XW9 330 aa23.69■■□□□ 1.38
PCCA-202ENST00000376285 ZBTB47Q9UFB7 747 aaPredicted RBP23.69■■□□□ 1.38
PCCA-202ENST00000376285 U2SURPO15042 1029 aaKnown RBP23.68■■□□□ 1.38
PCCA-202ENST00000376285 RGPD8O14715 1765 aaPredicted RBP23.67■■□□□ 1.38
PCCA-202ENST00000376285 RARSP54136 660 aaKnown RBP23.67■■□□□ 1.38
PCCA-202ENST00000376285 ZNF692Q9BU19 519 aaPredicted RBP23.67■■□□□ 1.38
PCCA-202ENST00000376285 POLKQ9UBT6 870 aa23.67■■□□□ 1.38
PCCA-202ENST00000376285 DIAPH1O60610 1272 aaKnown RBP23.66■■□□□ 1.38
PCCA-202ENST00000376285 FBLN1P23142 703 aa23.66■■□□□ 1.38
PCCA-202ENST00000376285 PLEKHF1Q96S99 279 aa23.66■■□□□ 1.38
PCCA-202ENST00000376285 SETD1BQ9UPS6 1966 aaKnown RBP23.66■■□□□ 1.38
PCCA-202ENST00000376285 ZRANB1Q9UGI0 708 aa23.65■■□□□ 1.38
PCCA-202ENST00000376285 CANXP27824 592 aaKnown RBP23.64■■□□□ 1.37
PCCA-202ENST00000376285 PANK1Q8TE04 598 aa23.64■■□□□ 1.37
PCCA-202ENST00000376285 AATKQ6ZMQ8 1374 aa23.63■■□□□ 1.37
PCCA-202ENST00000376285 PLEKHG3A1L390 1219 aa23.62■■□□□ 1.37
PCCA-202ENST00000376285 NUTM2FA1L443 756 aa23.62■■□□□ 1.37
PCCA-202ENST00000376285 FRAT1Q92837 279 aaPredicted RBP23.62■■□□□ 1.37
PCCA-202ENST00000376285 COG6Q9Y2V7 657 aa23.62■■□□□ 1.37
PCCA-202ENST00000376285 CDK12Q9NYV4 1490 aaPredicted RBP23.61■■□□□ 1.37
PCCA-202ENST00000376285 LRRC7Q96NW7 1537 aa23.61■■□□□ 1.37
PCCA-202ENST00000376285 ACEP12821 1306 aa23.61■■□□□ 1.37
PCCA-202ENST00000376285 CHD2O14647 1828 aaKnown RBP23.61■■□□□ 1.37
PCCA-202ENST00000376285 COG3Q96JB2 828 aa23.61■■□□□ 1.37
PCCA-202ENST00000376285 MYH16Q9H6N6 1097 aa23.61■■□□□ 1.37
PCCA-202ENST00000376285 PIK3R4Q99570 1358 aa23.61■■□□□ 1.37
PCCA-202ENST00000376285 DNAJC5Q9H3Z4 198 aa23.6■■□□□ 1.37
PCCA-202ENST00000376285 PPM1GO15355 546 aaPredicted RBP23.6■■□□□ 1.37
PCCA-202ENST00000376285 CLUAP1Q96AJ1 413 aa23.6■■□□□ 1.37
PCCA-202ENST00000376285 USP6P35125 1406 aa23.59■■□□□ 1.37
PCCA-202ENST00000376285 IGHDP01880 384 aa23.59■■□□□ 1.37
PCCA-202ENST00000376285 EMILIN1Q9Y6C2 1016 aa23.59■■□□□ 1.37
PCCA-202ENST00000376285 NALCNQ8IZF0 1738 aa23.59■■□□□ 1.37
PCCA-202ENST00000376285 MAPK8IP3Q9UPT6 1336 aa23.58■■□□□ 1.36
PCCA-202ENST00000376285 TMPOP42166 694 aaKnown RBP23.57■■□□□ 1.36
PCCA-202ENST00000376285 TTC21BQ7Z4L5 1316 aa23.57■■□□□ 1.36
PCCA-202ENST00000376285 BCL2L13Q9BXK5 485 aa23.57■■□□□ 1.36
PCCA-202ENST00000376285 KCNA6P17658 529 aa23.56■■□□□ 1.36
PCCA-202ENST00000376285 RGS3P49796 1198 aa23.56■■□□□ 1.36
PCCA-202ENST00000376285 C8orf34Q49A92 452 aa23.56■■□□□ 1.36
PCCA-202ENST00000376285 FMN2Q9NZ56 1722 aa23.56■■□□□ 1.36
PCCA-202ENST00000376285 OVOS2A0A0J9YW53 1432 aa23.55■■□□□ 1.36
PCCA-202ENST00000376285 OVOS2Q6IE36 1432 aa23.55■■□□□ 1.36
PCCA-202ENST00000376285 RLBP1P12271 317 aa23.55■■□□□ 1.36
PCCA-202ENST00000376285 FAM161AQ3B820 660 aa23.55■■□□□ 1.36
PCCA-202ENST00000376285 TRIM35Q9UPQ4 493 aa23.55■■□□□ 1.36
PCCA-202ENST00000376285 TNNQ9UQP3 1299 aa23.55■■□□□ 1.36
PCCA-202ENST00000376285 PNNQ9H307 717 aaKnown RBP23.55■■□□□ 1.36
PCCA-202ENST00000376285 SSH2Q76I76 1423 aa23.54■■□□□ 1.36
PCCA-202ENST00000376285 FCHSD2O94868 740 aa23.54■■□□□ 1.36
PCCA-202ENST00000376285 ANKLE2Q86XL3 938 aa23.54■■□□□ 1.36
PCCA-202ENST00000376285 TSR2Q969E8 191 aaKnown RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms