RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 MSH6P52701 1360 aa19.66■□□□□ 0.74
CCHCR1-201ENST00000376266 FRAT1Q92837 279 aaPredicted RBP19.66■□□□□ 0.74
CCHCR1-201ENST00000376266 RCAN3Q9UKA8 241 aa19.66■□□□□ 0.74
CCHCR1-201ENST00000376266 CDC42BPGQ6DT37 1551 aa19.65■□□□□ 0.74
CCHCR1-201ENST00000376266 ATF3P18847 181 aa19.65■□□□□ 0.74
CCHCR1-201ENST00000376266 PUS7Q96PZ0 661 aaKnown RBP19.65■□□□□ 0.74
CCHCR1-201ENST00000376266 SLC12A5Q9H2X9 1139 aa19.64■□□□□ 0.73
CCHCR1-201ENST00000376266 ATAD2Q6PL18 1390 aa19.63■□□□□ 0.73
CCHCR1-201ENST00000376266 DAXXQ9UER7 740 aaPredicted RBP19.63■□□□□ 0.73
CCHCR1-201ENST00000376266 ATP7BP35670 1465 aa19.62■□□□□ 0.73
CCHCR1-201ENST00000376266 CABP1Q9NZU7 370 aa19.62■□□□□ 0.73
CCHCR1-201ENST00000376266 CCDC61Q9Y6R9 512 aa19.62■□□□□ 0.73
CCHCR1-201ENST00000376266 FMN2Q9NZ56 1722 aa19.62■□□□□ 0.73
CCHCR1-201ENST00000376266 CADPS2Q86UW7 1296 aa19.61■□□□□ 0.73
CCHCR1-201ENST00000376266 USP32Q8NFA0 1604 aa19.61■□□□□ 0.73
CCHCR1-201ENST00000376266 DCCP43146 1447 aa19.6■□□□□ 0.73
CCHCR1-201ENST00000376266 RGPD8O14715 1765 aaPredicted RBP19.59■□□□□ 0.73
CCHCR1-201ENST00000376266 MYOM1P52179 1685 aa19.59■□□□□ 0.73
CCHCR1-201ENST00000376266 PPIP5K1Q6PFW1 1433 aa19.59■□□□□ 0.73
CCHCR1-201ENST00000376266 SLC4A3P48751 1232 aa19.59■□□□□ 0.73
CCHCR1-201ENST00000376266 ANKARQ7Z5J8 1434 aa19.58■□□□□ 0.72
CCHCR1-201ENST00000376266 ESCO1Q5FWF5 840 aa19.57■□□□□ 0.72
CCHCR1-201ENST00000376266 PMFBP1Q8TBY8 1022 aa19.57■□□□□ 0.72
CCHCR1-201ENST00000376266 PANK3Q9H999 370 aa19.57■□□□□ 0.72
CCHCR1-201ENST00000376266 MST1RQ04912 1400 aa19.57■□□□□ 0.72
CCHCR1-201ENST00000376266 ORAI2Q96SN7 254 aa19.57■□□□□ 0.72
CCHCR1-201ENST00000376266 RSPH6AQ9H0K4 717 aa19.57■□□□□ 0.72
CCHCR1-201ENST00000376266 C1orf167Q5SNV9 1468 aa19.56■□□□□ 0.72
CCHCR1-201ENST00000376266 SKAP1Q86WV1 359 aa19.55■□□□□ 0.72
CCHCR1-201ENST00000376266 SLAIN2Q9P270 581 aa19.55■□□□□ 0.72
CCHCR1-201ENST00000376266 NINLQ9Y2I6 1382 aa19.54■□□□□ 0.72
CCHCR1-201ENST00000376266 TOPAZ1Q8N9V7 1692 aa19.54■□□□□ 0.72
CCHCR1-201ENST00000376266 PLEKHG3A1L390 1219 aa19.53■□□□□ 0.72
CCHCR1-201ENST00000376266 PHF8Q9UPP1 1060 aa19.53■□□□□ 0.72
CCHCR1-201ENST00000376266 ACEP12821 1306 aa19.53■□□□□ 0.72
CCHCR1-201ENST00000376266 CD163L1Q9NR16 1453 aa19.52■□□□□ 0.72
CCHCR1-201ENST00000376266 FAM43AQ8N2R8 423 aa19.52■□□□□ 0.72
CCHCR1-201ENST00000376266 CERKQ8TCT0 537 aa19.52■□□□□ 0.72
CCHCR1-201ENST00000376266 TERF2IPQ9NYB0 399 aa19.52■□□□□ 0.72
CCHCR1-201ENST00000376266 A0A1W2PP64 1363 aa19.52■□□□□ 0.72
CCHCR1-201ENST00000376266 NGDNQ8NEJ9 315 aaKnown RBP19.52■□□□□ 0.71
CCHCR1-201ENST00000376266 CARD14Q9BXL6 1004 aa19.52■□□□□ 0.71
CCHCR1-201ENST00000376266 ITSN1Q15811 1721 aa19.51■□□□□ 0.71
CCHCR1-201ENST00000376266 BRD4O60885 1362 aaPredicted RBP19.51■□□□□ 0.71
CCHCR1-201ENST00000376266 ANKRD36BQ8N2N9 1353 aa19.51■□□□□ 0.71
CCHCR1-201ENST00000376266 PDE3BQ13370 1112 aa19.51■□□□□ 0.71
CCHCR1-201ENST00000376266 HDGFL2Q7Z4V5 671 aaPredicted RBP19.5■□□□□ 0.71
CCHCR1-201ENST00000376266 MYBBP1AQ9BQG0 1328 aaKnown RBP19.5■□□□□ 0.71
CCHCR1-201ENST00000376266 PLIN1O60240 522 aa19.5■□□□□ 0.71
CCHCR1-201ENST00000376266 PER1O15534 1290 aaPredicted RBP19.49■□□□□ 0.71
CCHCR1-201ENST00000376266 FOXO3O43524 673 aa19.49■□□□□ 0.71
CCHCR1-201ENST00000376266 CPSF1Q10570 1443 aaKnown RBP19.49■□□□□ 0.71
CCHCR1-201ENST00000376266 BRINP3Q76B58 766 aa19.48■□□□□ 0.71
CCHCR1-201ENST00000376266 POLR3AO14802 1390 aaPredicted RBP19.47■□□□□ 0.71
CCHCR1-201ENST00000376266 KTN1Q86UP2 1357 aaKnown RBP19.47■□□□□ 0.71
CCHCR1-201ENST00000376266 FRAT2O75474 233 aaPredicted RBP19.47■□□□□ 0.71
CCHCR1-201ENST00000376266 CRBNQ96SW2 442 aa19.47■□□□□ 0.71
CCHCR1-201ENST00000376266 RALBP1Q15311 655 aa19.47■□□□□ 0.71
CCHCR1-201ENST00000376266 DDX17Q92841 729 aaKnown RBP19.47■□□□□ 0.71
CCHCR1-201ENST00000376266 ZNF692Q9BU19 519 aaPredicted RBP19.46■□□□□ 0.71
CCHCR1-201ENST00000376266 KNSTRNQ9Y448 316 aa19.46■□□□□ 0.71
CCHCR1-201ENST00000376266 NSD3Q9BZ95 1437 aa19.46■□□□□ 0.71
CCHCR1-201ENST00000376266 UBAP1LF5GYI3 381 aa19.45■□□□□ 0.7
CCHCR1-201ENST00000376266 XPCQ01831 940 aaPredicted RBP19.45■□□□□ 0.7
CCHCR1-201ENST00000376266 TOM1O60784 492 aa19.45■□□□□ 0.7
CCHCR1-201ENST00000376266 CDCA7LQ96GN5 454 aa19.45■□□□□ 0.7
CCHCR1-201ENST00000376266 PSME1Q06323 249 aa19.44■□□□□ 0.7
CCHCR1-201ENST00000376266 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.44■□□□□ 0.7
CCHCR1-201ENST00000376266 PIP4K2BP78356 416 aa19.43■□□□□ 0.7
CCHCR1-201ENST00000376266 IQSEC2Q5JU85 1478 aa19.43■□□□□ 0.7
CCHCR1-201ENST00000376266 USP6P35125 1406 aa19.43■□□□□ 0.7
CCHCR1-201ENST00000376266 AKAP12Q02952 1782 aa19.43■□□□□ 0.7
CCHCR1-201ENST00000376266 KIF1AQ12756 1690 aa19.41■□□□□ 0.7
CCHCR1-201ENST00000376266 CC2D1BQ5T0F9 858 aaKnown RBP19.4■□□□□ 0.7
CCHCR1-201ENST00000376266 MON2Q7Z3U7 1717 aa19.4■□□□□ 0.7
CCHCR1-201ENST00000376266 EDC4Q6P2E9 1401 aaKnown RBP19.4■□□□□ 0.7
CCHCR1-201ENST00000376266 FAM161AQ3B820 660 aa19.4■□□□□ 0.7
CCHCR1-201ENST00000376266 AMER1Q5JTC6 1135 aaPredicted RBP19.4■□□□□ 0.7
CCHCR1-201ENST00000376266 KRT28Q7Z3Y7 464 aa19.4■□□□□ 0.7
CCHCR1-201ENST00000376266 NPHP3Q7Z494 1330 aa19.39■□□□□ 0.69
CCHCR1-201ENST00000376266 TTC21BQ7Z4L5 1316 aa19.39■□□□□ 0.69
CCHCR1-201ENST00000376266 CGNL1Q0VF96 1302 aa19.39■□□□□ 0.69
CCHCR1-201ENST00000376266 ROBO1Q9Y6N7 1651 aa19.38■□□□□ 0.69
CCHCR1-201ENST00000376266 SSH2Q76I76 1423 aa19.38■□□□□ 0.69
CCHCR1-201ENST00000376266 FYB1O15117 783 aa19.38■□□□□ 0.69
CCHCR1-201ENST00000376266 NME9Q86XW9 330 aa19.38■□□□□ 0.69
CCHCR1-201ENST00000376266 NLRP13Q86W25 1043 aa19.37■□□□□ 0.69
CCHCR1-201ENST00000376266 GGNBP2Q9H3C7 697 aa19.37■□□□□ 0.69
CCHCR1-201ENST00000376266 NRKQ7Z2Y5 1582 aa19.36■□□□□ 0.69
CCHCR1-201ENST00000376266 ZRANB1Q9UGI0 708 aa19.36■□□□□ 0.69
CCHCR1-201ENST00000376266 C8orf34Q49A92 452 aa19.35■□□□□ 0.69
CCHCR1-201ENST00000376266 CENPQQ7L2Z9 268 aaPredicted RBP19.35■□□□□ 0.69
CCHCR1-201ENST00000376266 KDM2BQ8NHM5 1336 aa19.35■□□□□ 0.69
CCHCR1-201ENST00000376266 NUTM2GQ5VZR2 741 aa19.34■□□□□ 0.69
CCHCR1-201ENST00000376266 PKNOX2Q96KN3 472 aa19.34■□□□□ 0.69
CCHCR1-201ENST00000376266 PXDNQ92626 1479 aa19.34■□□□□ 0.69
CCHCR1-201ENST00000376266 LMOD2Q6P5Q4 547 aa19.34■□□□□ 0.69
CCHCR1-201ENST00000376266 C20orf194Q5TEA3 1177 aa19.33■□□□□ 0.69
CCHCR1-201ENST00000376266 ABTB2Q8N961 1025 aa19.33■□□□□ 0.69
CCHCR1-201ENST00000376266 TTC21AQ8NDW8 1320 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms