RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 KIF14Q15058 1648 aa16.55■□□□□ 0.24
C9orf47-203ENST00000375851 BECN2A8MW95 431 aa16.54■□□□□ 0.24
C9orf47-203ENST00000375851 MARCH6O60337 910 aa16.54■□□□□ 0.24
C9orf47-203ENST00000375851 TMPOP42166 694 aaKnown RBP16.54■□□□□ 0.24
C9orf47-203ENST00000375851 ZNF530Q6P9A1 599 aaPredicted RBP16.54■□□□□ 0.24
C9orf47-203ENST00000375851 MVPQ14764 893 aaKnown RBP16.54■□□□□ 0.24
C9orf47-203ENST00000375851 TATP17735 454 aaPredicted RBP16.54■□□□□ 0.24
C9orf47-203ENST00000375851 NFKBIBQ15653 356 aa16.54■□□□□ 0.24
C9orf47-203ENST00000375851 GOLGA6L19H0YKK7 550 aa16.53■□□□□ 0.24
C9orf47-203ENST00000375851 IDI1Q13907 227 aa16.53■□□□□ 0.24
C9orf47-203ENST00000375851 RPRD2Q5VT52 1461 aaKnown RBP16.53■□□□□ 0.24
C9orf47-203ENST00000375851 CNTROBQ8N137 903 aa16.52■□□□□ 0.24
C9orf47-203ENST00000375851 TRIM29Q14134 588 aa16.52■□□□□ 0.24
C9orf47-203ENST00000375851 NOL10Q9BSC4 688 aaKnown RBP16.52■□□□□ 0.23
C9orf47-203ENST00000375851 BACH2Q9BYV9 841 aa16.52■□□□□ 0.23
C9orf47-203ENST00000375851 NINLQ9Y2I6 1382 aa16.52■□□□□ 0.23
C9orf47-203ENST00000375851 NFE2L2Q16236 605 aa16.51■□□□□ 0.23
C9orf47-203ENST00000375851 WASHC4Q2M389 1173 aa16.51■□□□□ 0.23
C9orf47-203ENST00000375851 CCT4P50991 539 aaKnown RBP16.51■□□□□ 0.23
C9orf47-203ENST00000375851 FSD1Q9BTV5 496 aa16.51■□□□□ 0.23
C9orf47-203ENST00000375851 AMER1Q5JTC6 1135 aaPredicted RBP16.51■□□□□ 0.23
C9orf47-203ENST00000375851 STRN4Q9NRL3 753 aa16.51■□□□□ 0.23
C9orf47-203ENST00000375851 ZNF428Q96B54 188 aa16.5■□□□□ 0.23
C9orf47-203ENST00000375851 ARID3AQ99856 593 aa16.5■□□□□ 0.23
C9orf47-203ENST00000375851 POGZQ7Z3K3 1410 aa16.5■□□□□ 0.23
C9orf47-203ENST00000375851 FBXO31Q5XUX0 539 aaPredicted RBP16.5■□□□□ 0.23
C9orf47-203ENST00000375851 BICD2Q8TD16 824 aa16.5■□□□□ 0.23
C9orf47-203ENST00000375851 AMOTL1Q8IY63 956 aa16.5■□□□□ 0.23
C9orf47-203ENST00000375851 SRCIN1Q9C0H9 1055 aa16.49■□□□□ 0.23
C9orf47-203ENST00000375851 NEK4P51957 841 aa16.49■□□□□ 0.23
C9orf47-203ENST00000375851 RALYLQ86SE5 291 aaKnown RBP16.49■□□□□ 0.23
C9orf47-203ENST00000375851 VPS53Q5VIR6 699 aa16.48■□□□□ 0.23
C9orf47-203ENST00000375851 THUMPD2Q9BTF0 503 aaKnown RBP16.48■□□□□ 0.23
C9orf47-203ENST00000375851 NFXL1Q6ZNB6 911 aa16.48■□□□□ 0.23
C9orf47-203ENST00000375851 GPATCH8Q9UKJ3 1502 aaKnown RBP16.48■□□□□ 0.23
C9orf47-203ENST00000375851 RBM42Q9BTD8 480 aaKnown RBP16.48■□□□□ 0.23
C9orf47-203ENST00000375851 PES1O00541 588 aaKnown RBP16.47■□□□□ 0.23
C9orf47-203ENST00000375851 TPD52L1Q16890 204 aaPredicted RBP16.47■□□□□ 0.23
C9orf47-203ENST00000375851 THOC2Q8NI27 1593 aaKnown RBP16.47■□□□□ 0.23
C9orf47-203ENST00000375851 XPCQ01831 940 aaPredicted RBP16.46■□□□□ 0.23
C9orf47-203ENST00000375851 MEX3CQ5U5Q3 659 aaKnown RBP16.46■□□□□ 0.23
C9orf47-203ENST00000375851 TOM1L2Q6ZVM7 507 aa16.46■□□□□ 0.23
C9orf47-203ENST00000375851 ERC1Q8IUD2 1116 aa16.45■□□□□ 0.22
C9orf47-203ENST00000375851 PSMA5P28066 241 aa16.45■□□□□ 0.22
C9orf47-203ENST00000375851 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.45■□□□□ 0.22
C9orf47-203ENST00000375851 ERICH2A1L162 156 aa16.45■□□□□ 0.22
C9orf47-203ENST00000375851 FAM177BA6PVY3 158 aa16.45■□□□□ 0.22
C9orf47-203ENST00000375851 RABEP1Q15276 862 aa16.45■□□□□ 0.22
C9orf47-203ENST00000375851 PTPRKQ15262 1439 aa16.45■□□□□ 0.22
C9orf47-203ENST00000375851 CABP4P57796 275 aa16.45■□□□□ 0.22
C9orf47-203ENST00000375851 NME9Q86XW9 330 aa16.45■□□□□ 0.22
C9orf47-203ENST00000375851 LRRCC1Q9C099 1032 aa16.45■□□□□ 0.22
C9orf47-203ENST00000375851 CHD1LQ86WJ1 897 aa16.44■□□□□ 0.22
C9orf47-203ENST00000375851 TMEM57Q8N5G2 664 aa16.44■□□□□ 0.22
C9orf47-203ENST00000375851 DDX54Q8TDD1 881 aaKnown RBP16.44■□□□□ 0.22
C9orf47-203ENST00000375851 DNAJC2Q99543 621 aaKnown RBP16.44■□□□□ 0.22
C9orf47-203ENST00000375851 PRDM11Q9NQV5 511 aa16.44■□□□□ 0.22
C9orf47-203ENST00000375851 FOSBP53539 338 aa16.44■□□□□ 0.22
C9orf47-203ENST00000375851 SPG7Q9UQ90 795 aa16.44■□□□□ 0.22
C9orf47-203ENST00000375851 FANCAO15360 1455 aa16.44■□□□□ 0.22
C9orf47-203ENST00000375851 RAD21O60216 631 aa16.43■□□□□ 0.22
C9orf47-203ENST00000375851 ZC3H6P61129 1189 aaKnown RBP16.43■□□□□ 0.22
C9orf47-203ENST00000375851 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.43■□□□□ 0.22
C9orf47-203ENST00000375851 DHX29Q7Z478 1369 aaKnown RBP16.43■□□□□ 0.22
C9orf47-203ENST00000375851 TPM3P06753 285 aa16.43■□□□□ 0.22
C9orf47-203ENST00000375851 C14orf93Q9H972 538 aaKnown RBP16.43■□□□□ 0.22
C9orf47-203ENST00000375851 SSH1Q8WYL5 1049 aa16.42■□□□□ 0.22
C9orf47-203ENST00000375851 RBM33Q96EV2 1170 aaKnown RBP16.42■□□□□ 0.22
C9orf47-203ENST00000375851 UNC13AQ9UPW8 1703 aa16.42■□□□□ 0.22
C9orf47-203ENST00000375851 MCM2P49736 904 aa16.42■□□□□ 0.22
C9orf47-203ENST00000375851 RARSP54136 660 aaKnown RBP16.42■□□□□ 0.22
C9orf47-203ENST00000375851 DCTN1Q14203 1278 aa16.42■□□□□ 0.22
C9orf47-203ENST00000375851 DHX16O60231 1041 aaKnown RBP16.42■□□□□ 0.22
C9orf47-203ENST00000375851 KIF6Q6ZMV9 814 aa16.42■□□□□ 0.22
C9orf47-203ENST00000375851 MCM10Q7L590 875 aa16.42■□□□□ 0.22
C9orf47-203ENST00000375851 EMILIN1Q9Y6C2 1016 aa16.42■□□□□ 0.22
C9orf47-203ENST00000375851 NOS1P29475 1434 aa16.42■□□□□ 0.22
C9orf47-203ENST00000375851 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.42■□□□□ 0.22
C9orf47-203ENST00000375851 C20orf194Q5TEA3 1177 aa16.42■□□□□ 0.22
C9orf47-203ENST00000375851 RPAP2Q8IXW5 612 aaPredicted RBP16.42■□□□□ 0.22
C9orf47-203ENST00000375851 MIS18AQ9NYP9 233 aa16.42■□□□□ 0.22
C9orf47-203ENST00000375851 SCAF11Q99590 1463 aaKnown RBP16.41■□□□□ 0.22
C9orf47-203ENST00000375851 HIP1O00291 1037 aa16.41■□□□□ 0.22
C9orf47-203ENST00000375851 WASLO00401 505 aaPredicted RBP16.41■□□□□ 0.22
C9orf47-203ENST00000375851 MYL6BP14649 208 aa16.41■□□□□ 0.22
C9orf47-203ENST00000375851 SRGAP3O43295 1099 aa16.41■□□□□ 0.22
C9orf47-203ENST00000375851 CCDC73Q6ZRK6 1079 aa16.41■□□□□ 0.22
C9orf47-203ENST00000375851 SIL1Q9H173 461 aa16.41■□□□□ 0.22
C9orf47-203ENST00000375851 BTBD11A6QL63 1104 aa16.4■□□□□ 0.22
C9orf47-203ENST00000375851 GNAT3A8MTJ3 354 aa16.4■□□□□ 0.22
C9orf47-203ENST00000375851 SAFBQ15424 915 aaKnown RBP eCLIP16.4■□□□□ 0.22
C9orf47-203ENST00000375851 CCDC27Q2M243 656 aa16.4■□□□□ 0.22
C9orf47-203ENST00000375851 TBC1D2BQ9UPU7 963 aa16.4■□□□□ 0.22
C9orf47-203ENST00000375851 KCNH5Q8NCM2 988 aa16.4■□□□□ 0.22
C9orf47-203ENST00000375851 TRIM34Q9BYJ4 488 aa16.4■□□□□ 0.22
C9orf47-203ENST00000375851 ATP10BO94823 1461 aa16.4■□□□□ 0.22
C9orf47-203ENST00000375851 TRAK2O60296 914 aa16.39■□□□□ 0.21
C9orf47-203ENST00000375851 FBXW7Q969H0 707 aa16.39■□□□□ 0.21
C9orf47-203ENST00000375851 TSR1Q2NL82 804 aaKnown RBP16.39■□□□□ 0.21
C9orf47-203ENST00000375851 AMOTL2Q9Y2J4 779 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms