RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 ARHGEF28Q8N1W1 1705 aaKnown RBP33.74■■■□□ 2.99
C9orf47-202ENST00000375850 PAK3O75914 559 aaPredicted RBP33.74■■■□□ 2.99
C9orf47-202ENST00000375850 ITSN1Q15811 1721 aa33.73■■■□□ 2.99
C9orf47-202ENST00000375850 BRWD3Q6RI45 1802 aa33.72■■■□□ 2.99
C9orf47-202ENST00000375850 NRAPQ86VF7 1730 aa33.71■■■□□ 2.99
C9orf47-202ENST00000375850 A0A0G2JS52 829 aa33.71■■■□□ 2.99
C9orf47-202ENST00000375850 MYT1Q01538 1121 aa33.71■■■□□ 2.99
C9orf47-202ENST00000375850 CDK19Q9BWU1 502 aa33.69■■■□□ 2.98
C9orf47-202ENST00000375850 PRDM11Q9NQV5 511 aa33.69■■■□□ 2.98
C9orf47-202ENST00000375850 KIAA1210Q9ULL0 1709 aa33.68■■■□□ 2.98
C9orf47-202ENST00000375850 FAM98CQ17RN3 349 aaKnown RBP33.68■■■□□ 2.98
C9orf47-202ENST00000375850 CCDC61Q9Y6R9 512 aa33.68■■■□□ 2.98
C9orf47-202ENST00000375850 SPATA31A5Q5VU36 1347 aa33.67■■■□□ 2.98
C9orf47-202ENST00000375850 SPATA31A7Q8IWB4 1347 aa33.67■■■□□ 2.98
C9orf47-202ENST00000375850 POLR3AO14802 1390 aaPredicted RBP33.67■■■□□ 2.98
C9orf47-202ENST00000375850 SRCAPQ6ZRS2 3230 aa33.66■■■□□ 2.98
C9orf47-202ENST00000375850 DEFB132Q7Z7B7 95 aa33.65■■■□□ 2.98
C9orf47-202ENST00000375850 CRYBG1Q9Y4K1 1723 aa33.64■■■□□ 2.98
C9orf47-202ENST00000375850 PLEKHG3A1L390 1219 aa33.63■■■□□ 2.97
C9orf47-202ENST00000375850 BAG6P46379 1132 aa33.62■■■□□ 2.97
C9orf47-202ENST00000375850 ACEP12821 1306 aa33.6■■■□□ 2.97
C9orf47-202ENST00000375850 NBPF8Q3BBV2 869 aa33.6■■■□□ 2.97
C9orf47-202ENST00000375850 KIAA0232Q92628 1395 aa33.6■■■□□ 2.97
C9orf47-202ENST00000375850 TOPAZ1Q8N9V7 1692 aa33.56■■■□□ 2.96
C9orf47-202ENST00000375850 SPATA31A1Q5TZJ5 1347 aa33.54■■■□□ 2.96
C9orf47-202ENST00000375850 NBPF1Q3BBV0 1214 aa33.54■■■□□ 2.96
C9orf47-202ENST00000375850 CENPJQ9HC77 1338 aaPredicted RBP33.53■■■□□ 2.96
C9orf47-202ENST00000375850 BRD4O60885 1362 aaPredicted RBP33.53■■■□□ 2.96
C9orf47-202ENST00000375850 THSD7AQ9UPZ6 1657 aa33.52■■■□□ 2.96
C9orf47-202ENST00000375850 PHRF1Q9P1Y6 1649 aaKnown RBP33.52■■■□□ 2.96
C9orf47-202ENST00000375850 ABTB2Q8N961 1025 aa33.51■■■□□ 2.95
C9orf47-202ENST00000375850 ZC3H6P61129 1189 aaKnown RBP33.5■■■□□ 2.95
C9orf47-202ENST00000375850 SRPK2P78362 688 aaKnown RBP33.5■■■□□ 2.95
C9orf47-202ENST00000375850 CHRNA2Q15822 529 aa33.5■■■□□ 2.95
C9orf47-202ENST00000375850 CPDO75976 1380 aa33.49■■■□□ 2.95
C9orf47-202ENST00000375850 NUTM2GQ5VZR2 741 aa33.48■■■□□ 2.95
C9orf47-202ENST00000375850 STRN4Q9NRL3 753 aa33.48■■■□□ 2.95
C9orf47-202ENST00000375850 USP19O94966 1318 aa33.48■■■□□ 2.95
C9orf47-202ENST00000375850 DISP2A7MBM2 1401 aa33.47■■■□□ 2.95
C9orf47-202ENST00000375850 NLRP13Q86W25 1043 aa33.47■■■□□ 2.95
C9orf47-202ENST00000375850 PPIP5K1Q6PFW1 1433 aa33.46■■■□□ 2.95
C9orf47-202ENST00000375850 EVA1CP58658 441 aa33.46■■■□□ 2.95
C9orf47-202ENST00000375850 RGPD1P0DJD0 1748 aa33.45■■■□□ 2.95
C9orf47-202ENST00000375850 BARGINQ6ZT62 677 aa33.45■■■□□ 2.95
C9orf47-202ENST00000375850 FAM196AQ6ZSG2 479 aa33.44■■■□□ 2.94
C9orf47-202ENST00000375850 SSH2Q76I76 1423 aa33.44■■■□□ 2.94
C9orf47-202ENST00000375850 NRKQ7Z2Y5 1582 aa33.43■■■□□ 2.94
C9orf47-202ENST00000375850 EN1Q05925 392 aaPredicted RBP33.4■■■□□ 2.94
C9orf47-202ENST00000375850 FAM182BQ5T319 152 aa33.4■■■□□ 2.94
C9orf47-202ENST00000375850 CABP2Q9NPB3 220 aa33.4■■■□□ 2.94
C9orf47-202ENST00000375850 GCP02774 474 aa33.39■■■□□ 2.94
C9orf47-202ENST00000375850 THRAP3Q9Y2W1 955 aaKnown RBP33.38■■■□□ 2.93
C9orf47-202ENST00000375850 TCP11L2Q8N4U5 519 aa33.37■■■□□ 2.93
C9orf47-202ENST00000375850 L3MBTL2Q969R5 705 aa33.37■■■□□ 2.93
C9orf47-202ENST00000375850 LRP5O75197 1615 aa33.37■■■□□ 2.93
C9orf47-202ENST00000375850 PDE3BQ13370 1112 aa33.36■■■□□ 2.93
C9orf47-202ENST00000375850 CAMTA1Q9Y6Y1 1673 aa33.36■■■□□ 2.93
C9orf47-202ENST00000375850 PARD3Q8TEW0 1356 aa33.35■■■□□ 2.93
C9orf47-202ENST00000375850 USP35Q9P2H5 1018 aa33.35■■■□□ 2.93
C9orf47-202ENST00000375850 EVC2Q86UK5 1308 aa33.34■■■□□ 2.93
C9orf47-202ENST00000375850 CABP1Q9NZU7 370 aa33.34■■■□□ 2.93
C9orf47-202ENST00000375850 USP6P35125 1406 aa33.34■■■□□ 2.93
C9orf47-202ENST00000375850 LMO7Q8WWI1 1683 aa33.33■■■□□ 2.93
C9orf47-202ENST00000375850 LARP1Q6PKG0 1096 aaKnown RBP33.33■■■□□ 2.93
C9orf47-202ENST00000375850 QRICH2Q9H0J4 1663 aa33.33■■■□□ 2.93
C9orf47-202ENST00000375850 C11orf95C9JLR9 678 aaPredicted RBP33.32■■■□□ 2.92
C9orf47-202ENST00000375850 PSDA5PKW4 1024 aaPredicted RBP33.31■■■□□ 2.92
C9orf47-202ENST00000375850 TRIM37O94972 964 aa33.3■■■□□ 2.92
C9orf47-202ENST00000375850 TNS1Q9HBL0 1735 aaKnown RBP33.29■■■□□ 2.92
C9orf47-202ENST00000375850 NLRP6P59044 892 aa33.29■■■□□ 2.92
C9orf47-202ENST00000375850 CAMKK2Q96RR4 588 aa33.28■■■□□ 2.92
C9orf47-202ENST00000375850 COL5A2P05997 1499 aaPredicted RBP33.27■■■□□ 2.92
C9orf47-202ENST00000375850 AATKQ6ZMQ8 1374 aa33.27■■■□□ 2.92
C9orf47-202ENST00000375850 ZNF692Q9BU19 519 aaPredicted RBP33.27■■■□□ 2.92
C9orf47-202ENST00000375850 EZH2Q15910 746 aaKnown RBP33.26■■■□□ 2.91
C9orf47-202ENST00000375850 ROCK2O75116 1388 aaKnown RBP33.25■■■□□ 2.91
C9orf47-202ENST00000375850 APBA3O96018 575 aa33.25■■■□□ 2.91
C9orf47-202ENST00000375850 CRB1P82279 1406 aa33.25■■■□□ 2.91
C9orf47-202ENST00000375850 SLIT3O75094 1523 aa33.24■■■□□ 2.91
C9orf47-202ENST00000375850 R3HDM1Q15032 1099 aaKnown RBP33.23■■■□□ 2.91
C9orf47-202ENST00000375850 TRPM1Q7Z4N2 1603 aa33.23■■■□□ 2.91
C9orf47-202ENST00000375850 SIN3AQ96ST3 1273 aa33.2■■■□□ 2.91
C9orf47-202ENST00000375850 KCNH5Q8NCM2 988 aa33.18■■■□□ 2.9
C9orf47-202ENST00000375850 TTC21AQ8NDW8 1320 aa33.17■■■□□ 2.9
C9orf47-202ENST00000375850 PARP4Q9UKK3 1724 aaKnown RBP33.16■■■□□ 2.9
C9orf47-202ENST00000375850 ZBTB7CA1YPR0 619 aa33.15■■■□□ 2.9
C9orf47-202ENST00000375850 NEUROD1Q13562 356 aa33.15■■■□□ 2.9
C9orf47-202ENST00000375850 TTC21BQ7Z4L5 1316 aa33.15■■■□□ 2.9
C9orf47-202ENST00000375850 NBPF14Q5TI25 921 aa33.14■■■□□ 2.9
C9orf47-202ENST00000375850 TOM1L2Q6ZVM7 507 aa33.13■■■□□ 2.89
C9orf47-202ENST00000375850 CDCA7Q9BWT1 371 aaPredicted RBP33.13■■■□□ 2.89
C9orf47-202ENST00000375850 OVOS2A0A0G2JMS6 1433 aa33.12■■■□□ 2.89
C9orf47-202ENST00000375850 OVOS2A0A0J9YW53 1432 aa33.12■■■□□ 2.89
C9orf47-202ENST00000375850 OVOS2Q6IE36 1432 aa33.12■■■□□ 2.89
C9orf47-202ENST00000375850 PIK3C2AO00443 1686 aa33.12■■■□□ 2.89
C9orf47-202ENST00000375850 SBNO2Q9Y2G9 1366 aa33.11■■■□□ 2.89
C9orf47-202ENST00000375850 WDR17Q8IZU2 1322 aa33.11■■■□□ 2.89
C9orf47-202ENST00000375850 CPSF1Q10570 1443 aaKnown RBP33.11■■■□□ 2.89
C9orf47-202ENST00000375850 DDB1Q16531 1140 aa33.1■■■□□ 2.89
C9orf47-202ENST00000375850 ARHGEF25Q86VW2 580 aa33.1■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms