RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 CDK19Q9BWU1 502 aa19.48■□□□□ 0.71
MSH5-203ENST00000375750 C3P01024 1663 aa19.48■□□□□ 0.71
MSH5-203ENST00000375750 SETD1AO15047 1707 aaKnown RBP19.47■□□□□ 0.71
MSH5-203ENST00000375750 FER1L4A9Z1Z3 1794 aa19.47■□□□□ 0.71
MSH5-203ENST00000375750 SPRYD3Q8NCJ5 442 aa19.46■□□□□ 0.71
MSH5-203ENST00000375750 CGNL1Q0VF96 1302 aa19.46■□□□□ 0.71
MSH5-203ENST00000375750 ABCC11Q96J66 1382 aa19.46■□□□□ 0.71
MSH5-203ENST00000375750 NLRP1Q9C000 1473 aa19.46■□□□□ 0.71
MSH5-203ENST00000375750 PDE3AQ14432 1141 aa19.45■□□□□ 0.7
MSH5-203ENST00000375750 TCP11L2Q8N4U5 519 aa19.44■□□□□ 0.7
MSH5-203ENST00000375750 RARSP54136 660 aaKnown RBP19.44■□□□□ 0.7
MSH5-203ENST00000375750 MORC1Q86VD1 984 aa19.44■□□□□ 0.7
MSH5-203ENST00000375750 ANKRD36BQ8N2N9 1353 aa19.44■□□□□ 0.7
MSH5-203ENST00000375750 ARXQ96QS3 562 aa19.44■□□□□ 0.7
MSH5-203ENST00000375750 SLC26A8Q96RN1 970 aa19.43■□□□□ 0.7
MSH5-203ENST00000375750 CABP1Q9NZU7 370 aa19.42■□□□□ 0.7
MSH5-203ENST00000375750 PDZRN3Q9UPQ7 1066 aa19.42■□□□□ 0.7
MSH5-203ENST00000375750 A0A1W2PP64 1363 aa19.41■□□□□ 0.7
MSH5-203ENST00000375750 EID1Q9Y6B2 187 aa19.41■□□□□ 0.7
MSH5-203ENST00000375750 DLC1Q96QB1 1528 aa19.41■□□□□ 0.7
MSH5-203ENST00000375750 ATAD2Q6PL18 1390 aa19.41■□□□□ 0.7
MSH5-203ENST00000375750 ADAMTS13Q76LX8 1427 aa19.4■□□□□ 0.7
MSH5-203ENST00000375750 MTHFSP49914 203 aa19.38■□□□□ 0.69
MSH5-203ENST00000375750 MAPK8IP3Q9UPT6 1336 aa19.38■□□□□ 0.69
MSH5-203ENST00000375750 PLEKHG1Q9ULL1 1385 aa19.38■□□□□ 0.69
MSH5-203ENST00000375750 THEMISQ8N1K5 641 aaPredicted RBP19.38■□□□□ 0.69
MSH5-203ENST00000375750 RUNDC1Q96C34 613 aa19.38■□□□□ 0.69
MSH5-203ENST00000375750 POLR3AO14802 1390 aaPredicted RBP19.37■□□□□ 0.69
MSH5-203ENST00000375750 TERF2IPQ9NYB0 399 aa19.37■□□□□ 0.69
MSH5-203ENST00000375750 NINLQ9Y2I6 1382 aa19.36■□□□□ 0.69
MSH5-203ENST00000375750 WASLO00401 505 aaPredicted RBP19.36■□□□□ 0.69
MSH5-203ENST00000375750 GGNBP2Q9H3C7 697 aa19.36■□□□□ 0.69
MSH5-203ENST00000375750 CD163L1Q9NR16 1453 aa19.35■□□□□ 0.69
MSH5-203ENST00000375750 EIF5BO60841 1220 aaKnown RBP19.35■□□□□ 0.69
MSH5-203ENST00000375750 TBC1D2Q9BYX2 928 aa19.35■□□□□ 0.69
MSH5-203ENST00000375750 ROBO2Q9HCK4 1378 aa19.35■□□□□ 0.69
MSH5-203ENST00000375750 BECN1Q14457 450 aa19.34■□□□□ 0.69
MSH5-203ENST00000375750 TSR2Q969E8 191 aaKnown RBP19.34■□□□□ 0.69
MSH5-203ENST00000375750 NCKAP5LQ9HCH0 1330 aa19.34■□□□□ 0.69
MSH5-203ENST00000375750 ANTXR1Q9H6X2 564 aa19.34■□□□□ 0.69
MSH5-203ENST00000375750 HDGFL2Q7Z4V5 671 aaPredicted RBP19.33■□□□□ 0.69
MSH5-203ENST00000375750 VIRMAQ69YN4 1812 aaKnown RBP19.33■□□□□ 0.69
MSH5-203ENST00000375750 SIRT1Q96EB6 747 aa19.33■□□□□ 0.68
MSH5-203ENST00000375750 ARHGAP23Q9P227 1491 aa19.33■□□□□ 0.68
MSH5-203ENST00000375750 TECPR2O15040 1411 aa19.33■□□□□ 0.68
MSH5-203ENST00000375750 PMFBP1Q8TBY8 1022 aa19.32■□□□□ 0.68
MSH5-203ENST00000375750 RIMS1Q86UR5 1692 aaKnown RBP19.32■□□□□ 0.68
MSH5-203ENST00000375750 SLIT1O75093 1534 aa19.32■□□□□ 0.68
MSH5-203ENST00000375750 FAM135BQ49AJ0 1406 aa19.32■□□□□ 0.68
MSH5-203ENST00000375750 FYB1O15117 783 aa19.32■□□□□ 0.68
MSH5-203ENST00000375750 TBC1D32Q96NH3 1257 aa19.32■□□□□ 0.68
MSH5-203ENST00000375750 SHPRHQ149N8 1683 aa19.31■□□□□ 0.68
MSH5-203ENST00000375750 PTPRUQ92729 1446 aa19.31■□□□□ 0.68
MSH5-203ENST00000375750 U2AF1L5P0DN76 240 aaPredicted RBP19.31■□□□□ 0.68
MSH5-203ENST00000375750 U2AF1Q01081 240 aaKnown RBP eCLIP19.31■□□□□ 0.682e-10■■■□□ 16.7
MSH5-203ENST00000375750 USP32Q8NFA0 1604 aa19.3■□□□□ 0.68
MSH5-203ENST00000375750 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.3■□□□□ 0.68
MSH5-203ENST00000375750 GZF1Q9H116 711 aaPredicted RBP19.3■□□□□ 0.68
MSH5-203ENST00000375750 AMOTL2Q9Y2J4 779 aa19.3■□□□□ 0.68
MSH5-203ENST00000375750 NUDT16Q96DE0 195 aaKnown RBP19.3■□□□□ 0.68
MSH5-203ENST00000375750 MED14O60244 1454 aa19.29■□□□□ 0.68
MSH5-203ENST00000375750 PHF23Q9BUL5 403 aaPredicted RBP19.29■□□□□ 0.68
MSH5-203ENST00000375750 NGEFQ8N5V2 710 aa19.29■□□□□ 0.68
MSH5-203ENST00000375750 NSD2O96028 1365 aa19.29■□□□□ 0.68
MSH5-203ENST00000375750 NUTM2FA1L443 756 aa19.28■□□□□ 0.68
MSH5-203ENST00000375750 TBX22Q9Y458 520 aa19.28■□□□□ 0.68
MSH5-203ENST00000375750 CPS1P31327 1500 aa19.28■□□□□ 0.68
MSH5-203ENST00000375750 MFAP1P55081 439 aaKnown RBP19.28■□□□□ 0.68
MSH5-203ENST00000375750 UPF2Q9HAU5 1272 aaKnown RBP19.28■□□□□ 0.68
MSH5-203ENST00000375750 KNDC1Q76NI1 1749 aa19.27■□□□□ 0.68
MSH5-203ENST00000375750 IQSEC2Q5JU85 1478 aa19.27■□□□□ 0.68
MSH5-203ENST00000375750 WDR63Q8IWG1 891 aa19.27■□□□□ 0.68
MSH5-203ENST00000375750 RWDD1Q9H446 243 aaPredicted RBP19.27■□□□□ 0.68
MSH5-203ENST00000375750 PPIP5K1Q6PFW1 1433 aa19.27■□□□□ 0.68
MSH5-203ENST00000375750 MVPQ14764 893 aaKnown RBP19.26■□□□□ 0.67
MSH5-203ENST00000375750 CCDC61Q9Y6R9 512 aa19.26■□□□□ 0.67
MSH5-203ENST00000375750 CEP170BQ9Y4F5 1589 aaPredicted RBP19.25■□□□□ 0.67
MSH5-203ENST00000375750 FTSJ3Q8IY81 847 aaKnown RBP19.25■□□□□ 0.67
MSH5-203ENST00000375750 PRR36Q9H6K5 1346 aa19.25■□□□□ 0.67
MSH5-203ENST00000375750 EXOSC9Q06265 439 aaKnown RBP19.25■□□□□ 0.67
MSH5-203ENST00000375750 RRAGDQ9NQL2 400 aaPredicted RBP19.25■□□□□ 0.67
MSH5-203ENST00000375750 U2SURPO15042 1029 aaKnown RBP19.24■□□□□ 0.67
MSH5-203ENST00000375750 FBLN1P23142 703 aa19.24■□□□□ 0.67
MSH5-203ENST00000375750 DZIP1LQ8IYY4 767 aaKnown RBP19.23■□□□□ 0.67
MSH5-203ENST00000375750 ADAMTSL3P82987 1691 aa19.23■□□□□ 0.67
MSH5-203ENST00000375750 FAM43AQ8N2R8 423 aa19.23■□□□□ 0.67
MSH5-203ENST00000375750 SMC4Q9NTJ3 1288 aa19.23■□□□□ 0.67
MSH5-203ENST00000375750 ZKSCAN2Q63HK3 967 aa19.22■□□□□ 0.67
MSH5-203ENST00000375750 CFAP53Q96M91 514 aa19.22■□□□□ 0.67
MSH5-203ENST00000375750 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.22■□□□□ 0.67
MSH5-203ENST00000375750 ATP7BP35670 1465 aa19.21■□□□□ 0.67
MSH5-203ENST00000375750 ITPRIPQ8IWB1 547 aa19.21■□□□□ 0.67
MSH5-203ENST00000375750 TRIM27P14373 513 aa19.21■□□□□ 0.67
MSH5-203ENST00000375750 PANK2Q9BZ23 570 aa19.21■□□□□ 0.67
MSH5-203ENST00000375750 MYH16Q9H6N6 1097 aa19.21■□□□□ 0.67
MSH5-203ENST00000375750 CPSF1Q10570 1443 aaKnown RBP19.21■□□□□ 0.67
MSH5-203ENST00000375750 SSH1Q8WYL5 1049 aa19.21■□□□□ 0.67
MSH5-203ENST00000375750 C22orf23Q9BZE7 217 aa19.21■□□□□ 0.67
MSH5-203ENST00000375750 ANKLE2Q86XL3 938 aa19.2■□□□□ 0.66
MSH5-203ENST00000375750 ZRANB1Q9UGI0 708 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms