RNA–Protein interactions for RNA: ENST00000375640.7

C6orf48-205, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 1,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-205ENST00000375640 FAM83GA6ND36 823 aa28.35■■■□□ 2.13
C6orf48-205ENST00000375640 TIMELESSQ9UNS1 1208 aa28.35■■■□□ 2.13
C6orf48-205ENST00000375640 SLIT2O94813 1529 aa28.34■■■□□ 2.13
C6orf48-205ENST00000375640 GJD4Q96KN9 370 aaPredicted RBP28.33■■■□□ 2.13
C6orf48-205ENST00000375640 BRD4O60885 1362 aaPredicted RBP28.32■■■□□ 2.12
C6orf48-205ENST00000375640 SBNO2Q9Y2G9 1366 aa28.32■■■□□ 2.12
C6orf48-205ENST00000375640 TRPM3Q9HCF6 1732 aaPredicted RBP28.32■■■□□ 2.12
C6orf48-205ENST00000375640 ABTB2Q8N961 1025 aa28.31■■■□□ 2.12
C6orf48-205ENST00000375640 ITSN1Q15811 1721 aa28.3■■■□□ 2.12
C6orf48-205ENST00000375640 QRICH2Q9H0J4 1663 aa28.29■■■□□ 2.12
C6orf48-205ENST00000375640 ZNF692Q9BU19 519 aaPredicted RBP28.29■■■□□ 2.12
C6orf48-205ENST00000375640 NUTM2GQ5VZR2 741 aa28.28■■■□□ 2.12
C6orf48-205ENST00000375640 RGS12O14924 1447 aa28.27■■■□□ 2.12
C6orf48-205ENST00000375640 ATAD2Q6PL18 1390 aa28.27■■■□□ 2.12
C6orf48-205ENST00000375640 VPS72Q15906 364 aa28.27■■■□□ 2.12
C6orf48-205ENST00000375640 TOPAZ1Q8N9V7 1692 aa28.26■■■□□ 2.12
C6orf48-205ENST00000375640 ALS2Q96Q42 1657 aa28.26■■■□□ 2.12
C6orf48-205ENST00000375640 SLC24A1O60721 1099 aa28.25■■■□□ 2.11
C6orf48-205ENST00000375640 NLRP13Q86W25 1043 aa28.25■■■□□ 2.11
C6orf48-205ENST00000375640 UPF1Q92900 1129 aaKnown RBP eCLIP28.24■■■□□ 2.115e-22■□□□□ 9.9
C6orf48-205ENST00000375640 PRDM11Q9NQV5 511 aa28.24■■■□□ 2.11
C6orf48-205ENST00000375640 PUS7Q96PZ0 661 aaKnown RBP28.23■■■□□ 2.11
C6orf48-205ENST00000375640 BTG4Q9NY30 223 aa28.23■■■□□ 2.11
C6orf48-205ENST00000375640 USP6P35125 1406 aa28.22■■■□□ 2.11
C6orf48-205ENST00000375640 MARF1Q9Y4F3 1742 aaKnown RBP28.21■■■□□ 2.11
C6orf48-205ENST00000375640 ST20-MTHFSA0A0A6YYL1 179 aa28.21■■■□□ 2.11
C6orf48-205ENST00000375640 CCDC9Q9Y3X0 531 aaKnown RBP28.2■■■□□ 2.1
C6orf48-205ENST00000375640 ZC3H6P61129 1189 aaKnown RBP28.19■■■□□ 2.1
C6orf48-205ENST00000375640 TESK2Q96S53 571 aa28.19■■■□□ 2.1
C6orf48-205ENST00000375640 USP19O94966 1318 aa28.18■■■□□ 2.1
C6orf48-205ENST00000375640 SSH2Q76I76 1423 aa28.18■■■□□ 2.1
C6orf48-205ENST00000375640 NLRP6P59044 892 aa28.18■■■□□ 2.1
C6orf48-205ENST00000375640 CCER1Q8TC90 406 aaPredicted RBP28.18■■■□□ 2.1
C6orf48-205ENST00000375640 KIAA0232Q92628 1395 aa28.18■■■□□ 2.1
C6orf48-205ENST00000375640 ONECUT3O60422 494 aaPredicted RBP28.17■■■□□ 2.1
C6orf48-205ENST00000375640 GCP02774 474 aa28.17■■■□□ 2.1
C6orf48-205ENST00000375640 TTC21BQ7Z4L5 1316 aa28.16■■■□□ 2.1
C6orf48-205ENST00000375640 CHRNA2Q15822 529 aa28.14■■■□□ 2.1
C6orf48-205ENST00000375640 TMC1Q8TDI8 760 aa28.14■■■□□ 2.1
C6orf48-205ENST00000375640 CPSF1Q10570 1443 aaKnown RBP28.14■■■□□ 2.1
C6orf48-205ENST00000375640 ABCA3Q99758 1704 aa28.14■■■□□ 2.1
C6orf48-205ENST00000375640 TTC21AQ8NDW8 1320 aa28.13■■■□□ 2.09
C6orf48-205ENST00000375640 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.12■■■□□ 2.09
C6orf48-205ENST00000375640 SLC12A5Q9H2X9 1139 aa28.12■■■□□ 2.09
C6orf48-205ENST00000375640 CPDO75976 1380 aa28.11■■■□□ 2.09
C6orf48-205ENST00000375640 KTN1Q86UP2 1357 aaKnown RBP28.11■■■□□ 2.09
C6orf48-205ENST00000375640 SEPT12Q8IYM1 358 aa28.11■■■□□ 2.09
C6orf48-205ENST00000375640 HDGFL2Q7Z4V5 671 aaPredicted RBP28.1■■■□□ 2.09
C6orf48-205ENST00000375640 SPATA31A5Q5VU36 1347 aa28.09■■■□□ 2.09
C6orf48-205ENST00000375640 SPATA31A7Q8IWB4 1347 aa28.09■■■□□ 2.09
C6orf48-205ENST00000375640 USP47Q96K76 1375 aa28.09■■■□□ 2.09
C6orf48-205ENST00000375640 NWD2Q9ULI1 1742 aa28.09■■■□□ 2.09
C6orf48-205ENST00000375640 COL14A1Q05707 1796 aaKnown RBP28.09■■■□□ 2.09
C6orf48-205ENST00000375640 TERF2IPQ9NYB0 399 aa28.08■■■□□ 2.09
C6orf48-205ENST00000375640 GLI3P10071 1580 aa28.07■■■□□ 2.08
C6orf48-205ENST00000375640 EVA1CP58658 441 aa28.07■■■□□ 2.08
C6orf48-205ENST00000375640 TMF1P82094 1093 aa28.06■■■□□ 2.08
C6orf48-205ENST00000375640 CRYBG1Q9Y4K1 1723 aa28.06■■■□□ 2.08
C6orf48-205ENST00000375640 KCNH5Q8NCM2 988 aa28.05■■■□□ 2.08
C6orf48-205ENST00000375640 STRN4Q9NRL3 753 aa28.05■■■□□ 2.08
C6orf48-205ENST00000375640 PLCH1Q4KWH8 1693 aa28.04■■■□□ 2.08
C6orf48-205ENST00000375640 FAM98CQ17RN3 349 aaKnown RBP28.04■■■□□ 2.08
C6orf48-205ENST00000375640 NINLQ9Y2I6 1382 aa28.03■■■□□ 2.08
C6orf48-205ENST00000375640 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.03■■■□□ 2.08
C6orf48-205ENST00000375640 SPATA31A1Q5TZJ5 1347 aa28.02■■■□□ 2.08
C6orf48-205ENST00000375640 CDCA8Q53HL2 280 aa28.01■■■□□ 2.07
C6orf48-205ENST00000375640 CCDC125Q86Z20 511 aa28.01■■■□□ 2.07
C6orf48-205ENST00000375640 CD163L1Q9NR16 1453 aa28.01■■■□□ 2.07
C6orf48-205ENST00000375640 PHRF1Q9P1Y6 1649 aaKnown RBP28■■■□□ 2.07
C6orf48-205ENST00000375640 A0A0G2JS52 829 aa28■■■□□ 2.07
C6orf48-205ENST00000375640 MYT1Q01538 1121 aa28■■■□□ 2.07
C6orf48-205ENST00000375640 KRT27Q7Z3Y8 459 aa28■■■□□ 2.07
C6orf48-205ENST00000375640 AATKQ6ZMQ8 1374 aa27.99■■■□□ 2.07
C6orf48-205ENST00000375640 NRKQ7Z2Y5 1582 aa27.99■■■□□ 2.07
C6orf48-205ENST00000375640 ARHGEF25Q86VW2 580 aa27.98■■■□□ 2.07
C6orf48-205ENST00000375640 USP31Q70CQ4 1352 aa27.98■■■□□ 2.07
C6orf48-205ENST00000375640 SLIT3O75094 1523 aa27.97■■■□□ 2.07
C6orf48-205ENST00000375640 ZBTB7CA1YPR0 619 aa27.97■■■□□ 2.07
C6orf48-205ENST00000375640 LARP1Q6PKG0 1096 aaKnown RBP27.97■■■□□ 2.07
C6orf48-205ENST00000375640 NRAPQ86VF7 1730 aa27.97■■■□□ 2.07
C6orf48-205ENST00000375640 A0A1W2PP64 1363 aa27.97■■■□□ 2.07
C6orf48-205ENST00000375640 NME9Q86XW9 330 aa27.96■■■□□ 2.07
C6orf48-205ENST00000375640 EDC4Q6P2E9 1401 aaKnown RBP27.95■■■□□ 2.07
C6orf48-205ENST00000375640 CAMTA1Q9Y6Y1 1673 aa27.95■■■□□ 2.07
C6orf48-205ENST00000375640 ZRANB1Q9UGI0 708 aa27.95■■■□□ 2.06
C6orf48-205ENST00000375640 BARGINQ6ZT62 677 aa27.94■■■□□ 2.06
C6orf48-205ENST00000375640 SOX12O15370 315 aa27.93■■■□□ 2.06
C6orf48-205ENST00000375640 TCP11L2Q8N4U5 519 aa27.93■■■□□ 2.06
C6orf48-205ENST00000375640 USP35Q9P2H5 1018 aa27.93■■■□□ 2.06
C6orf48-205ENST00000375640 PIK3C2AO00443 1686 aa27.92■■■□□ 2.06
C6orf48-205ENST00000375640 THRAP3Q9Y2W1 955 aaKnown RBP27.92■■■□□ 2.06
C6orf48-205ENST00000375640 AKAP12Q02952 1782 aa27.91■■■□□ 2.06
C6orf48-205ENST00000375640 AXIN2Q9Y2T1 843 aa27.91■■■□□ 2.06
C6orf48-205ENST00000375640 ANKRD36BQ8N2N9 1353 aa27.88■■■□□ 2.05
C6orf48-205ENST00000375640 COL5A2P05997 1499 aaPredicted RBP27.88■■■□□ 2.05
C6orf48-205ENST00000375640 EIF4G2P78344 907 aaKnown RBP eCLIP27.87■■■□□ 2.05
C6orf48-205ENST00000375640 LMO7Q8WWI1 1683 aa27.87■■■□□ 2.05
C6orf48-205ENST00000375640 BLMP54132 1417 aaPredicted RBP27.85■■■□□ 2.05
C6orf48-205ENST00000375640 TOM1L2Q6ZVM7 507 aa27.85■■■□□ 2.05
C6orf48-205ENST00000375640 CRB1P82279 1406 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms