RNA–Protein interactions for RNA: ENST00000375238.8

NECAB3-202, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB3, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-202ENST00000375238 ACEP12821 1306 aa25.69■■□□□ 1.7
NECAB3-202ENST00000375238 MTHFSP49914 203 aa25.68■■□□□ 1.7
NECAB3-202ENST00000375238 B4GALNT3Q6L9W6 998 aa25.68■■□□□ 1.7
NECAB3-202ENST00000375238 RBM33Q96EV2 1170 aaKnown RBP25.68■■□□□ 1.7
NECAB3-202ENST00000375238 ANKARQ7Z5J8 1434 aa25.67■■□□□ 1.7
NECAB3-202ENST00000375238 PDE3BQ13370 1112 aa25.65■■□□□ 1.7
NECAB3-202ENST00000375238 CFAP53Q96M91 514 aa25.65■■□□□ 1.7
NECAB3-202ENST00000375238 LMTK3Q96Q04 1460 aa25.65■■□□□ 1.7
NECAB3-202ENST00000375238 ADGRL3Q9HAR2 1447 aa25.65■■□□□ 1.7
NECAB3-202ENST00000375238 NME9Q86XW9 330 aa25.65■■□□□ 1.7
NECAB3-202ENST00000375238 NRKQ7Z2Y5 1582 aa25.65■■□□□ 1.7
NECAB3-202ENST00000375238 SHPRHQ149N8 1683 aa25.64■■□□□ 1.69
NECAB3-202ENST00000375238 PMFBP1Q8TBY8 1022 aa25.63■■□□□ 1.69
NECAB3-202ENST00000375238 C14orf37Q86TY3 774 aa25.63■■□□□ 1.69
NECAB3-202ENST00000375238 USP6P35125 1406 aa25.62■■□□□ 1.69
NECAB3-202ENST00000375238 SALL2Q9Y467 1007 aaPredicted RBP25.61■■□□□ 1.69
NECAB3-202ENST00000375238 PROSER2Q86WR7 435 aaPredicted RBP25.6■■□□□ 1.69
NECAB3-202ENST00000375238 NGDNQ8NEJ9 315 aaKnown RBP25.6■■□□□ 1.69
NECAB3-202ENST00000375238 TTC21BQ7Z4L5 1316 aa25.6■■□□□ 1.69
NECAB3-202ENST00000375238 ZRANB1Q9UGI0 708 aa25.59■■□□□ 1.69
NECAB3-202ENST00000375238 COG3Q96JB2 828 aa25.58■■□□□ 1.69
NECAB3-202ENST00000375238 MAP2P11137 1827 aaKnown RBP25.56■■□□□ 1.68
NECAB3-202ENST00000375238 STRCQ7RTU9 1775 aa25.55■■□□□ 1.68
NECAB3-202ENST00000375238 STRCP1A6NGW2 1772 aa25.55■■□□□ 1.68
NECAB3-202ENST00000375238 CCDC146Q8IYE0 955 aa25.55■■□□□ 1.68
NECAB3-202ENST00000375238 CDCA7LQ96GN5 454 aa25.55■■□□□ 1.68
NECAB3-202ENST00000375238 SSH2Q76I76 1423 aa25.54■■□□□ 1.68
NECAB3-202ENST00000375238 RCAN3Q9UKA8 241 aa25.53■■□□□ 1.68
NECAB3-202ENST00000375238 RRP1P56182 461 aaKnown RBP25.52■■□□□ 1.68
NECAB3-202ENST00000375238 COL3A1P02461 1466 aaPredicted RBP25.52■■□□□ 1.68
NECAB3-202ENST00000375238 FBLN1P23142 703 aa25.51■■□□□ 1.67
NECAB3-202ENST00000375238 TTC21AQ8NDW8 1320 aa25.51■■□□□ 1.67
NECAB3-202ENST00000375238 POLKQ9UBT6 870 aa25.51■■□□□ 1.67
NECAB3-202ENST00000375238 PHF8Q9UPP1 1060 aa25.51■■□□□ 1.67
NECAB3-202ENST00000375238 AATKQ6ZMQ8 1374 aa25.49■■□□□ 1.67
NECAB3-202ENST00000375238 PPM1GO15355 546 aaPredicted RBP25.49■■□□□ 1.67
NECAB3-202ENST00000375238 OVOS2A0A0J9YW53 1432 aa25.48■■□□□ 1.67
NECAB3-202ENST00000375238 OVOS2Q6IE36 1432 aa25.48■■□□□ 1.67
NECAB3-202ENST00000375238 PNPLA6Q8IY17 1366 aa25.47■■□□□ 1.67
NECAB3-202ENST00000375238 ESCO1Q5FWF5 840 aa25.47■■□□□ 1.67
NECAB3-202ENST00000375238 TMEM94Q12767 1356 aa25.46■■□□□ 1.67
NECAB3-202ENST00000375238 U2AF1L5P0DN76 240 aaPredicted RBP25.46■■□□□ 1.67
NECAB3-202ENST00000375238 U2AF1Q01081 240 aaKnown RBP eCLIP25.46■■□□□ 1.672e-6■■□□□ 12.5
NECAB3-202ENST00000375238 APAF1O14727 1248 aa25.45■■□□□ 1.67
NECAB3-202ENST00000375238 CCDC136Q96JN2 1154 aa25.45■■□□□ 1.67
NECAB3-202ENST00000375238 C19orf44Q9H6X5 657 aa25.45■■□□□ 1.67
NECAB3-202ENST00000375238 EMILIN1Q9Y6C2 1016 aa25.45■■□□□ 1.67
NECAB3-202ENST00000375238 PIK3C2AO00443 1686 aa25.45■■□□□ 1.66
NECAB3-202ENST00000375238 DIAPH1O60610 1272 aaKnown RBP25.45■■□□□ 1.66
NECAB3-202ENST00000375238 U2SURPO15042 1029 aaKnown RBP25.44■■□□□ 1.66
NECAB3-202ENST00000375238 CDK12Q9NYV4 1490 aaPredicted RBP25.43■■□□□ 1.66
NECAB3-202ENST00000375238 RRS1Q15050 365 aaKnown RBP25.43■■□□□ 1.66
NECAB3-202ENST00000375238 RUNDC1Q96C34 613 aa25.42■■□□□ 1.66
NECAB3-202ENST00000375238 NCOA3Q9Y6Q9 1424 aa25.41■■□□□ 1.66
NECAB3-202ENST00000375238 ZNF521Q96K83 1311 aa25.4■■□□□ 1.66
NECAB3-202ENST00000375238 USP31Q70CQ4 1352 aa25.4■■□□□ 1.66
NECAB3-202ENST00000375238 PAK3O75914 559 aaPredicted RBP25.4■■□□□ 1.66
NECAB3-202ENST00000375238 ORAI2Q96SN7 254 aa25.39■■□□□ 1.66
NECAB3-202ENST00000375238 ATF3P18847 181 aa25.38■■□□□ 1.65
NECAB3-202ENST00000375238 EXOC6Q8TAG9 804 aa25.38■■□□□ 1.65
NECAB3-202ENST00000375238 C1orf167Q5SNV9 1468 aa25.37■■□□□ 1.65
NECAB3-202ENST00000375238 PSME1Q06323 249 aa25.37■■□□□ 1.65
NECAB3-202ENST00000375238 FANCIQ9NVI1 1328 aa25.37■■□□□ 1.65
NECAB3-202ENST00000375238 DCCP43146 1447 aa25.37■■□□□ 1.65
NECAB3-202ENST00000375238 SOX12O15370 315 aa25.37■■□□□ 1.65
NECAB3-202ENST00000375238 NLRP6P59044 892 aa25.37■■□□□ 1.65
NECAB3-202ENST00000375238 NGEFQ8N5V2 710 aa25.37■■□□□ 1.65
NECAB3-202ENST00000375238 IQSEC2Q5JU85 1478 aa25.36■■□□□ 1.65
NECAB3-202ENST00000375238 ABTB2Q8N961 1025 aa25.36■■□□□ 1.65
NECAB3-202ENST00000375238 KIF1AQ12756 1690 aa25.36■■□□□ 1.65
NECAB3-202ENST00000375238 USP54Q70EL1 1684 aa25.35■■□□□ 1.65
NECAB3-202ENST00000375238 MARF1Q9Y4F3 1742 aaKnown RBP25.35■■□□□ 1.65
NECAB3-202ENST00000375238 XIRP1Q702N8 1843 aaKnown RBP25.35■■□□□ 1.65
NECAB3-202ENST00000375238 NUTM2GQ5VZR2 741 aa25.35■■□□□ 1.65
NECAB3-202ENST00000375238 TCP11L2Q8N4U5 519 aa25.35■■□□□ 1.65
NECAB3-202ENST00000375238 MST1RQ04912 1400 aa25.33■■□□□ 1.65
NECAB3-202ENST00000375238 MSH6P52701 1360 aa25.33■■□□□ 1.65
NECAB3-202ENST00000375238 ZNF335Q9H4Z2 1342 aaPredicted RBP25.33■■□□□ 1.65
NECAB3-202ENST00000375238 FOXO3O43524 673 aa25.32■■□□□ 1.64
NECAB3-202ENST00000375238 GOLGA2Q08379 1002 aa25.32■■□□□ 1.64
NECAB3-202ENST00000375238 DUSP27Q5VZP5 1158 aa25.32■■□□□ 1.64
NECAB3-202ENST00000375238 PEAK1Q9H792 1746 aa25.32■■□□□ 1.64
NECAB3-202ENST00000375238 IL13P35225 146 aa25.31■■□□□ 1.64
NECAB3-202ENST00000375238 NEUROD2Q15784 382 aa25.31■■□□□ 1.64
NECAB3-202ENST00000375238 RRP7AQ9Y3A4 280 aaKnown RBP25.31■■□□□ 1.64
NECAB3-202ENST00000375238 CADPS2Q86UW7 1296 aa25.31■■□□□ 1.64
NECAB3-202ENST00000375238 MYT1Q01538 1121 aa25.3■■□□□ 1.64
NECAB3-202ENST00000375238 MAPK8IP3Q9UPT6 1336 aa25.3■■□□□ 1.64
NECAB3-202ENST00000375238 LRRC7Q96NW7 1537 aa25.3■■□□□ 1.64
NECAB3-202ENST00000375238 PLEKHF1Q96S99 279 aa25.29■■□□□ 1.64
NECAB3-202ENST00000375238 PNNQ9H307 717 aaKnown RBP25.29■■□□□ 1.64
NECAB3-202ENST00000375238 XPCQ01831 940 aaPredicted RBP25.29■■□□□ 1.64
NECAB3-202ENST00000375238 MAP3K19Q56UN5 1328 aa25.28■■□□□ 1.64
NECAB3-202ENST00000375238 MSH5O43196 834 aa25.27■■□□□ 1.64
NECAB3-202ENST00000375238 PLIN1O60240 522 aa25.27■■□□□ 1.64
NECAB3-202ENST00000375238 FCHSD2O94868 740 aa25.27■■□□□ 1.64
NECAB3-202ENST00000375238 ANP32EQ9BTT0 268 aa25.27■■□□□ 1.64
NECAB3-202ENST00000375238 WWC1Q8IX03 1113 aa25.27■■□□□ 1.64
NECAB3-202ENST00000375238 SLFN5Q08AF3 891 aa25.26■■□□□ 1.63
NECAB3-202ENST00000375238 TRMT2AQ8IZ69 625 aaKnown RBP25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms