RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 KRT27Q7Z3Y8 459 aa15.68■□□□□ 0.1
HLA-DQA1-202ENST00000374949 HIRIP3Q9BW71 556 aaPredicted RBP15.68■□□□□ 0.1
HLA-DQA1-202ENST00000374949 RGPD1P0DJD0 1748 aa15.68■□□□□ 0.1
HLA-DQA1-202ENST00000374949 ONECUT3O60422 494 aaPredicted RBP15.67■□□□□ 0.1
HLA-DQA1-202ENST00000374949 MINK1Q8N4C8 1332 aaPredicted RBP15.67■□□□□ 0.1
HLA-DQA1-202ENST00000374949 PRR36Q9H6K5 1346 aa15.67■□□□□ 0.1
HLA-DQA1-202ENST00000374949 FAM98CQ17RN3 349 aaKnown RBP15.66■□□□□ 0.1
HLA-DQA1-202ENST00000374949 THSD7AQ9UPZ6 1657 aa15.66■□□□□ 0.1
HLA-DQA1-202ENST00000374949 ARHGEF28Q8N1W1 1705 aaKnown RBP15.65■□□□□ 0.1
HLA-DQA1-202ENST00000374949 TNS1Q9HBL0 1735 aaKnown RBP15.65■□□□□ 0.1
HLA-DQA1-202ENST00000374949 BTG4Q9NY30 223 aa15.65■□□□□ 0.1
HLA-DQA1-202ENST00000374949 TRAK1Q9UPV9 953 aa15.65■□□□□ 0.1
HLA-DQA1-202ENST00000374949 ITSN1Q15811 1721 aa15.65■□□□□ 0.1
HLA-DQA1-202ENST00000374949 EIF3AQ14152 1382 aaKnown RBP15.64■□□□□ 0.09
HLA-DQA1-202ENST00000374949 GPRASP1Q5JY77 1395 aa15.64■□□□□ 0.09
HLA-DQA1-202ENST00000374949 PSDA5PKW4 1024 aaPredicted RBP15.64■□□□□ 0.09
HLA-DQA1-202ENST00000374949 PHRF1Q9P1Y6 1649 aaKnown RBP15.64■□□□□ 0.09
HLA-DQA1-202ENST00000374949 TONSLQ96HA7 1378 aa15.62■□□□□ 0.09
HLA-DQA1-202ENST00000374949 ATP7BP35670 1465 aa15.61■□□□□ 0.09
HLA-DQA1-202ENST00000374949 BAG6P46379 1132 aa15.61■□□□□ 0.09
HLA-DQA1-202ENST00000374949 FAM182BQ5T319 152 aa15.61■□□□□ 0.09
HLA-DQA1-202ENST00000374949 KDM2AQ9Y2K7 1162 aa15.6■□□□□ 0.09
HLA-DQA1-202ENST00000374949 SPATA31A5Q5VU36 1347 aa15.6■□□□□ 0.09
HLA-DQA1-202ENST00000374949 SPATA31A7Q8IWB4 1347 aa15.6■□□□□ 0.09
HLA-DQA1-202ENST00000374949 TOPAZ1Q8N9V7 1692 aa15.6■□□□□ 0.09
HLA-DQA1-202ENST00000374949 WASLO00401 505 aaPredicted RBP15.59■□□□□ 0.09
HLA-DQA1-202ENST00000374949 PAK3O75914 559 aaPredicted RBP15.59■□□□□ 0.09
HLA-DQA1-202ENST00000374949 NGDNQ8NEJ9 315 aaKnown RBP15.58■□□□□ 0.08
HLA-DQA1-202ENST00000374949 DCAF11Q8TEB1 546 aa15.58■□□□□ 0.08
HLA-DQA1-202ENST00000374949 PRDM11Q9NQV5 511 aa15.58■□□□□ 0.08
HLA-DQA1-202ENST00000374949 EN1Q05925 392 aaPredicted RBP15.57■□□□□ 0.08
HLA-DQA1-202ENST00000374949 KIAA0232Q92628 1395 aa15.57■□□□□ 0.08
HLA-DQA1-202ENST00000374949 DISP2A7MBM2 1401 aa15.56■□□□□ 0.08
HLA-DQA1-202ENST00000374949 NRKQ7Z2Y5 1582 aa15.56■□□□□ 0.08
HLA-DQA1-202ENST00000374949 CHRNA2Q15822 529 aa15.54■□□□□ 0.08
HLA-DQA1-202ENST00000374949 SPATA31A1Q5TZJ5 1347 aa15.53■□□□□ 0.08
HLA-DQA1-202ENST00000374949 R3HDM1Q15032 1099 aaKnown RBP15.53■□□□□ 0.08
HLA-DQA1-202ENST00000374949 NUTM2GQ5VZR2 741 aa15.53■□□□□ 0.08
HLA-DQA1-202ENST00000374949 L3MBTL2Q969R5 705 aa15.53■□□□□ 0.08
HLA-DQA1-202ENST00000374949 NUDT16Q96DE0 195 aaKnown RBP15.53■□□□□ 0.08
HLA-DQA1-202ENST00000374949 STRN4Q9NRL3 753 aa15.53■□□□□ 0.08
HLA-DQA1-202ENST00000374949 RREB1Q92766 1687 aa15.52■□□□□ 0.08
HLA-DQA1-202ENST00000374949 LMO7Q8WWI1 1683 aa15.51■□□□□ 0.07
HLA-DQA1-202ENST00000374949 NUP188Q5SRE5 1749 aa15.51■□□□□ 0.07
HLA-DQA1-202ENST00000374949 SSH2Q76I76 1423 aa15.51■□□□□ 0.07
HLA-DQA1-202ENST00000374949 ZC3H6P61129 1189 aaKnown RBP15.5■□□□□ 0.07
HLA-DQA1-202ENST00000374949 EZH2Q15910 746 aaKnown RBP15.5■□□□□ 0.07
HLA-DQA1-202ENST00000374949 KIAA1210Q9ULL0 1709 aa15.5■□□□□ 0.07
HLA-DQA1-202ENST00000374949 POLR3AO14802 1390 aaPredicted RBP15.49■□□□□ 0.07
HLA-DQA1-202ENST00000374949 CAMTA1Q9Y6Y1 1673 aa15.49■□□□□ 0.07
HLA-DQA1-202ENST00000374949 TRIM37O94972 964 aa15.49■□□□□ 0.07
HLA-DQA1-202ENST00000374949 USP35Q9P2H5 1018 aa15.49■□□□□ 0.07
HLA-DQA1-202ENST00000374949 CDK19Q9BWU1 502 aa15.48■□□□□ 0.07
HLA-DQA1-202ENST00000374949 ACEP12821 1306 aa15.47■□□□□ 0.07
HLA-DQA1-202ENST00000374949 FAM196AQ6ZSG2 479 aa15.46■□□□□ 0.07
HLA-DQA1-202ENST00000374949 CAMKK2Q96RR4 588 aa15.46■□□□□ 0.07
HLA-DQA1-202ENST00000374949 PARP4Q9UKK3 1724 aaKnown RBP15.46■□□□□ 0.06
HLA-DQA1-202ENST00000374949 APBA3O96018 575 aa15.45■□□□□ 0.06
HLA-DQA1-202ENST00000374949 STAC3Q96MF2 364 aa15.45■□□□□ 0.06
HLA-DQA1-202ENST00000374949 QRICH2Q9H0J4 1663 aa15.44■□□□□ 0.06
HLA-DQA1-202ENST00000374949 USP19O94966 1318 aa15.44■□□□□ 0.06
HLA-DQA1-202ENST00000374949 NBPF8Q3BBV2 869 aa15.44■□□□□ 0.06
HLA-DQA1-202ENST00000374949 LARP1Q6PKG0 1096 aaKnown RBP15.44■□□□□ 0.06
HLA-DQA1-202ENST00000374949 PARD3Q8TEW0 1356 aa15.44■□□□□ 0.06
HLA-DQA1-202ENST00000374949 EVA1CP58658 441 aa15.43■□□□□ 0.06
HLA-DQA1-202ENST00000374949 BARGINQ6ZT62 677 aa15.43■□□□□ 0.06
HLA-DQA1-202ENST00000374949 CCDC61Q9Y6R9 512 aa15.43■□□□□ 0.06
HLA-DQA1-202ENST00000374949 CPDO75976 1380 aa15.43■□□□□ 0.06
HLA-DQA1-202ENST00000374949 LRRC37A3O60309 1634 aa15.43■□□□□ 0.06
HLA-DQA1-202ENST00000374949 PPIP5K1Q6PFW1 1433 aa15.43■□□□□ 0.06
HLA-DQA1-202ENST00000374949 COL5A2P05997 1499 aaPredicted RBP15.42■□□□□ 0.06
HLA-DQA1-202ENST00000374949 ZNF316A6NFI3 1004 aaPredicted RBP15.42■□□□□ 0.06
HLA-DQA1-202ENST00000374949 PDE3BQ13370 1112 aa15.42■□□□□ 0.06
HLA-DQA1-202ENST00000374949 ABTB2Q8N961 1025 aa15.42■□□□□ 0.06
HLA-DQA1-202ENST00000374949 WNK3Q9BYP7 1800 aa15.42■□□□□ 0.06
HLA-DQA1-202ENST00000374949 PEAK1Q9H792 1746 aa15.41■□□□□ 0.06
HLA-DQA1-202ENST00000374949 PLEKHG3A1L390 1219 aa15.41■□□□□ 0.06
HLA-DQA1-202ENST00000374949 TCP11L2Q8N4U5 519 aa15.41■□□□□ 0.06
HLA-DQA1-202ENST00000374949 PIK3C2AO00443 1686 aa15.39■□□□□ 0.05
HLA-DQA1-202ENST00000374949 SRPK2P78362 688 aaKnown RBP15.39■□□□□ 0.05
HLA-DQA1-202ENST00000374949 NBPF1Q3BBV0 1214 aa15.39■□□□□ 0.05
HLA-DQA1-202ENST00000374949 RGPD3A6NKT7 1758 aaPredicted RBP15.39■□□□□ 0.05
HLA-DQA1-202ENST00000374949 RGPD4Q7Z3J3 1758 aa15.39■□□□□ 0.05
HLA-DQA1-202ENST00000374949 SBF2Q86WG5 1849 aa15.38■□□□□ 0.05
HLA-DQA1-202ENST00000374949 SLIT3O75094 1523 aa15.38■□□□□ 0.05
HLA-DQA1-202ENST00000374949 ZBTB7CA1YPR0 619 aa15.38■□□□□ 0.05
HLA-DQA1-202ENST00000374949 CABP2Q9NPB3 220 aa15.38■□□□□ 0.05
HLA-DQA1-202ENST00000374949 CRB1P82279 1406 aa15.37■□□□□ 0.05
HLA-DQA1-202ENST00000374949 GCP02774 474 aa15.37■□□□□ 0.05
HLA-DQA1-202ENST00000374949 CENPJQ9HC77 1338 aaPredicted RBP15.37■□□□□ 0.05
HLA-DQA1-202ENST00000374949 OVOS2A0A0G2JMS6 1433 aa15.36■□□□□ 0.05
HLA-DQA1-202ENST00000374949 OVOS2A0A0J9YW53 1432 aa15.36■□□□□ 0.05
HLA-DQA1-202ENST00000374949 USP6P35125 1406 aa15.36■□□□□ 0.05
HLA-DQA1-202ENST00000374949 OVOS2Q6IE36 1432 aa15.36■□□□□ 0.05
HLA-DQA1-202ENST00000374949 NLRP13Q86W25 1043 aa15.36■□□□□ 0.05
HLA-DQA1-202ENST00000374949 COL18A1P39060 1754 aa15.36■□□□□ 0.05
HLA-DQA1-202ENST00000374949 AKAP12Q02952 1782 aa15.35■□□□□ 0.05
HLA-DQA1-202ENST00000374949 NBPF14Q5TI25 921 aa15.35■□□□□ 0.05
HLA-DQA1-202ENST00000374949 THRAP3Q9Y2W1 955 aaKnown RBP15.35■□□□□ 0.05
HLA-DQA1-202ENST00000374949 RGPD5Q99666 1765 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms