RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 NOM1Q5C9Z4 860 aaKnown RBP7.68□□□□□ -1.18
PTPN3-202ENST00000374541 KANK4Q5T7N3 995 aaPredicted RBP7.68□□□□□ -1.18
PTPN3-202ENST00000374541 PLIN1O60240 522 aa7.68□□□□□ -1.18
PTPN3-202ENST00000374541 KRT27Q7Z3Y8 459 aa7.68□□□□□ -1.18
PTPN3-202ENST00000374541 UHRF1BP1LA0JNW5 1464 aa7.68□□□□□ -1.18
PTPN3-202ENST00000374541 ATF5Q9Y2D1 282 aaPredicted RBP7.68□□□□□ -1.18
PTPN3-202ENST00000374541 RBM6P78332 1123 aaKnown RBP7.67□□□□□ -1.18
PTPN3-202ENST00000374541 CABLES1Q8TDN4 633 aa7.67□□□□□ -1.18
PTPN3-202ENST00000374541 ACBD3Q9H3P7 528 aa7.67□□□□□ -1.18
PTPN3-202ENST00000374541 TROQ12816 1431 aaPredicted RBP7.67□□□□□ -1.18
PTPN3-202ENST00000374541 WDR78Q5VTH9 848 aa7.67□□□□□ -1.18
PTPN3-202ENST00000374541 MTERF4Q7Z6M4 381 aaKnown RBP7.67□□□□□ -1.18
PTPN3-202ENST00000374541 NECTIN2Q92692 538 aa7.67□□□□□ -1.18
PTPN3-202ENST00000374541 SLKQ9H2G2 1235 aaPredicted RBP7.67□□□□□ -1.18
PTPN3-202ENST00000374541 ZSCAN29Q8IWY8 852 aaPredicted RBP7.67□□□□□ -1.18
PTPN3-202ENST00000374541 SPRYD3Q8NCJ5 442 aa7.67□□□□□ -1.18
PTPN3-202ENST00000374541 RASSF8Q8NHQ8 419 aa7.67□□□□□ -1.18
PTPN3-202ENST00000374541 YY1P25490 414 aa7.67□□□□□ -1.18
PTPN3-202ENST00000374541 IKQ13123 557 aaPredicted RBP7.67□□□□□ -1.18
PTPN3-202ENST00000374541 RIC3Q7Z5B4 369 aa7.67□□□□□ -1.18
PTPN3-202ENST00000374541 FCHSD2O94868 740 aa7.67□□□□□ -1.18
PTPN3-202ENST00000374541 GZF1Q9H116 711 aaPredicted RBP7.67□□□□□ -1.18
PTPN3-202ENST00000374541 GJA3Q9Y6H8 435 aa7.67□□□□□ -1.18
PTPN3-202ENST00000374541 PTPRKQ15262 1439 aa7.66□□□□□ -1.18
PTPN3-202ENST00000374541 KCNA6P17658 529 aa7.66□□□□□ -1.18
PTPN3-202ENST00000374541 ITPRIPQ8IWB1 547 aa7.66□□□□□ -1.18
PTPN3-202ENST00000374541 SMARCC1Q92922 1105 aaPredicted RBP7.66□□□□□ -1.18
PTPN3-202ENST00000374541 PTCD1O75127 700 aaKnown RBP7.66□□□□□ -1.18
PTPN3-202ENST00000374541 HDAC9Q9UKV0 1011 aa7.66□□□□□ -1.18
PTPN3-202ENST00000374541 CTTNBP2Q8WZ74 1663 aa7.66□□□□□ -1.18
PTPN3-202ENST00000374541 MARCH6O60337 910 aa7.66□□□□□ -1.18
PTPN3-202ENST00000374541 SPON1Q9HCB6 807 aa7.66□□□□□ -1.18
PTPN3-202ENST00000374541 ZNF530Q6P9A1 599 aaPredicted RBP7.66□□□□□ -1.18
PTPN3-202ENST00000374541 CCDC27Q2M243 656 aa7.65□□□□□ -1.18
PTPN3-202ENST00000374541 EIF4G3O43432 1585 aaKnown RBP7.65□□□□□ -1.18
PTPN3-202ENST00000374541 GOLGA6L19H0YKK7 550 aa7.65□□□□□ -1.18
PTPN3-202ENST00000374541 DHX16O60231 1041 aaKnown RBP7.65□□□□□ -1.18
PTPN3-202ENST00000374541 IPO7O95373 1038 aaKnown RBP7.65□□□□□ -1.18
PTPN3-202ENST00000374541 WAPLQ7Z5K2 1190 aa7.65□□□□□ -1.18
PTPN3-202ENST00000374541 PRM3Q9NNZ6 103 aa7.65□□□□□ -1.18
PTPN3-202ENST00000374541 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.65□□□□□ -1.18
PTPN3-202ENST00000374541 SIN3AQ96ST3 1273 aa7.65□□□□□ -1.18
PTPN3-202ENST00000374541 CRBNQ96SW2 442 aa7.65□□□□□ -1.18
PTPN3-202ENST00000374541 MAP7D2Q96T17 732 aa7.65□□□□□ -1.18
PTPN3-202ENST00000374541 C9orf84Q5VXU9 1444 aa7.65□□□□□ -1.18
PTPN3-202ENST00000374541 TRIM37O94972 964 aa7.65□□□□□ -1.19
PTPN3-202ENST00000374541 SMC4Q9NTJ3 1288 aa7.65□□□□□ -1.19
PTPN3-202ENST00000374541 ARGLU1Q9NWB6 273 aaPredicted RBP7.65□□□□□ -1.19
PTPN3-202ENST00000374541 AFF2P51816 1311 aa7.65□□□□□ -1.19
PTPN3-202ENST00000374541 KAT6BQ8WYB5 2073 aa7.64□□□□□ -1.19
PTPN3-202ENST00000374541 IDI1Q13907 227 aa7.64□□□□□ -1.19
PTPN3-202ENST00000374541 RRP12Q5JTH9 1297 aaKnown RBP7.64□□□□□ -1.19
PTPN3-202ENST00000374541 RRBP1Q9P2E9 1410 aaKnown RBP7.64□□□□□ -1.19
PTPN3-202ENST00000374541 FYCO1Q9BQS8 1478 aa7.64□□□□□ -1.19
PTPN3-202ENST00000374541 SF3A1Q15459 793 aaKnown RBP7.64□□□□□ -1.19
PTPN3-202ENST00000374541 ZNF771Q7L3S4 317 aaPredicted RBP7.64□□□□□ -1.19
PTPN3-202ENST00000374541 CCDC87Q9NVE4 849 aa7.64□□□□□ -1.19
PTPN3-202ENST00000374541 C9orf78Q9NZ63 289 aaPredicted RBP7.64□□□□□ -1.19
PTPN3-202ENST00000374541 MFAP1P55081 439 aaKnown RBP7.64□□□□□ -1.19
PTPN3-202ENST00000374541 MAP3K9P80192 1104 aa7.64□□□□□ -1.19
PTPN3-202ENST00000374541 ABT1Q9ULW3 272 aaKnown RBP7.64□□□□□ -1.19
PTPN3-202ENST00000374541 FAM196AQ6ZSG2 479 aa7.64□□□□□ -1.19
PTPN3-202ENST00000374541 ANKRD20A12PQ8NF67 263 aa7.64□□□□□ -1.19
PTPN3-202ENST00000374541 GPBP1L1Q9HC44 474 aaPredicted RBP7.64□□□□□ -1.19
PTPN3-202ENST00000374541 ADAMTS12P58397 1594 aa7.64□□□□□ -1.19
PTPN3-202ENST00000374541 RPGRIP1LQ68CZ1 1315 aa7.64□□□□□ -1.19
PTPN3-202ENST00000374541 NUDT16Q96DE0 195 aaKnown RBP7.64□□□□□ -1.19
PTPN3-202ENST00000374541 MAGI3Q5TCQ9 1506 aa7.64□□□□□ -1.19
PTPN3-202ENST00000374541 ANKRD50Q9ULJ7 1429 aa7.64□□□□□ -1.19
PTPN3-202ENST00000374541 ECM2O94769 699 aaPredicted RBP7.63□□□□□ -1.19
PTPN3-202ENST00000374541 RTCBQ9Y3I0 505 aaKnown RBP7.63□□□□□ -1.19
PTPN3-202ENST00000374541 BECN2A8MW95 431 aa7.63□□□□□ -1.19
PTPN3-202ENST00000374541 APBB1O00213 710 aa7.63□□□□□ -1.19
PTPN3-202ENST00000374541 MYO1BO43795 1136 aa7.63□□□□□ -1.19
PTPN3-202ENST00000374541 CCDC47Q96A33 483 aaKnown RBP7.63□□□□□ -1.19
PTPN3-202ENST00000374541 NCOA2Q15596 1464 aa7.63□□□□□ -1.19
PTPN3-202ENST00000374541 GSE1Q14687 1217 aa7.63□□□□□ -1.19
PTPN3-202ENST00000374541 TPD52L1Q16890 204 aaPredicted RBP7.63□□□□□ -1.19
PTPN3-202ENST00000374541 CFAP70Q5T0N1 1121 aa7.63□□□□□ -1.19
PTPN3-202ENST00000374541 ABCC2Q92887 1545 aa7.63□□□□□ -1.19
PTPN3-202ENST00000374541 ZNF518AQ6AHZ1 1483 aa7.63□□□□□ -1.19
PTPN3-202ENST00000374541 KIF14Q15058 1648 aa7.63□□□□□ -1.19
PTPN3-202ENST00000374541 FYB1O15117 783 aa7.63□□□□□ -1.19
PTPN3-202ENST00000374541 ANKIB1Q9P2G1 1089 aa7.63□□□□□ -1.19
PTPN3-202ENST00000374541 ATP10AO60312 1499 aa7.63□□□□□ -1.19
PTPN3-202ENST00000374541 C6orf229H3BNL8 230 aa7.63□□□□□ -1.19
PTPN3-202ENST00000374541 ATP6V1AP38606 617 aa7.63□□□□□ -1.19
PTPN3-202ENST00000374541 EIF6P56537 245 aaKnown RBP7.63□□□□□ -1.19
PTPN3-202ENST00000374541 LRRFIP1Q32MZ4 808 aaKnown RBP7.63□□□□□ -1.19
PTPN3-202ENST00000374541 IBSPP21815 317 aaPredicted RBP7.62□□□□□ -1.19
PTPN3-202ENST00000374541 ARID3AQ99856 593 aa7.62□□□□□ -1.19
PTPN3-202ENST00000374541 CDCA7Q9BWT1 371 aaPredicted RBP7.62□□□□□ -1.19
PTPN3-202ENST00000374541 CCNL1Q9UK58 526 aaPredicted RBP7.62□□□□□ -1.19
PTPN3-202ENST00000374541 ERBINQ96RT1 1412 aa7.62□□□□□ -1.19
PTPN3-202ENST00000374541 VTI1AQ96AJ9 217 aa7.62□□□□□ -1.19
PTPN3-202ENST00000374541 CABP1Q9NZU7 370 aa7.62□□□□□ -1.19
PTPN3-202ENST00000374541 A0A087WZG4 1122 aa7.62□□□□□ -1.19
PTPN3-202ENST00000374541 RBM26Q5T8P6 1007 aaKnown RBP7.62□□□□□ -1.19
PTPN3-202ENST00000374541 VSIG10Q8N0Z9 540 aa7.62□□□□□ -1.19
PTPN3-202ENST00000374541 HECW1Q76N89 1606 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms