RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 NCLP19338 710 aaKnown RBP16.12■□□□□ 0.17
PRPF4-201ENST00000374198 AMER1Q5JTC6 1135 aaPredicted RBP16.12■□□□□ 0.17
PRPF4-201ENST00000374198 HSP90AB1P08238 724 aaKnown RBP16.11■□□□□ 0.17
PRPF4-201ENST00000374198 KLHL40Q2TBA0 621 aa16.11■□□□□ 0.17
PRPF4-201ENST00000374198 NGEFQ8N5V2 710 aa16.11■□□□□ 0.17
PRPF4-201ENST00000374198 SASS6Q6UVJ0 657 aa16.11■□□□□ 0.17
PRPF4-201ENST00000374198 RLBP1P12271 317 aa16.1■□□□□ 0.17
PRPF4-201ENST00000374198 RBM25P49756 843 aaKnown RBP16.1■□□□□ 0.17
PRPF4-201ENST00000374198 PDLIM2Q96JY6 352 aa16.1■□□□□ 0.17
PRPF4-201ENST00000374198 LAMC1P11047 1609 aa16.1■□□□□ 0.17
PRPF4-201ENST00000374198 GOLGA6L22H0YM25 854 aa16.09■□□□□ 0.17
PRPF4-201ENST00000374198 BBXQ8WY36 941 aaPredicted RBP16.09■□□□□ 0.17
PRPF4-201ENST00000374198 ZKSCAN5Q9Y2L8 839 aa16.09■□□□□ 0.17
PRPF4-201ENST00000374198 DDX49Q9Y6V7 483 aaKnown RBP16.09■□□□□ 0.17
PRPF4-201ENST00000374198 MCM5P33992 734 aa16.09■□□□□ 0.17
PRPF4-201ENST00000374198 ZNF445P59923 1031 aa16.09■□□□□ 0.17
PRPF4-201ENST00000374198 PPP6R1Q9UPN7 881 aa16.09■□□□□ 0.17
PRPF4-201ENST00000374198 DUOX2Q9NRD8 1548 aa16.08■□□□□ 0.17
PRPF4-201ENST00000374198 RARSP54136 660 aaKnown RBP16.08■□□□□ 0.16
PRPF4-201ENST00000374198 TNNT2P45379 298 aaPredicted RBP16.08■□□□□ 0.16
PRPF4-201ENST00000374198 CLTCQ00610 1675 aaKnown RBP16.07■□□□□ 0.16
PRPF4-201ENST00000374198 CLEC17AQ6ZS10 378 aa16.07■□□□□ 0.16
PRPF4-201ENST00000374198 TNNQ9UQP3 1299 aa16.07■□□□□ 0.16
PRPF4-201ENST00000374198 FAM135AQ9P2D6 1515 aa16.06■□□□□ 0.16
PRPF4-201ENST00000374198 C3P01024 1663 aa16.06■□□□□ 0.16
PRPF4-201ENST00000374198 GTF2E1P29083 439 aaPredicted RBP16.06■□□□□ 0.16
PRPF4-201ENST00000374198 GTPBP4Q9BZE4 634 aaKnown RBP16.06■□□□□ 0.16
PRPF4-201ENST00000374198 KIF20AO95235 890 aa16.05■□□□□ 0.16
PRPF4-201ENST00000374198 SSFA2P28290 1259 aa16.05■□□□□ 0.16
PRPF4-201ENST00000374198 PPP4R3BQ5MIZ7 849 aa16.05■□□□□ 0.16
PRPF4-201ENST00000374198 WWC1Q8IX03 1113 aa16.05■□□□□ 0.16
PRPF4-201ENST00000374198 RGL3Q3MIN7 710 aa16.04■□□□□ 0.16
PRPF4-201ENST00000374198 RBSNQ9H1K0 784 aa16.04■□□□□ 0.16
PRPF4-201ENST00000374198 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.04■□□□□ 0.163e-6■■■□□ 14.8
PRPF4-201ENST00000374198 FOXD4L1Q9NU39 408 aa16.04■□□□□ 0.16
PRPF4-201ENST00000374198 MROH2AA6NES4 1674 aa16.03■□□□□ 0.16
PRPF4-201ENST00000374198 EIF2AK4Q9P2K8 1649 aaKnown RBP16.03■□□□□ 0.16
PRPF4-201ENST00000374198 BAG4O95429 457 aaKnown RBP16.03■□□□□ 0.16
PRPF4-201ENST00000374198 STAC3Q96MF2 364 aa16.03■□□□□ 0.16
PRPF4-201ENST00000374198 ARHGAP31Q2M1Z3 1444 aa16.03■□□□□ 0.16
PRPF4-201ENST00000374198 ASXL1Q8IXJ9 1541 aa16.03■□□□□ 0.16
PRPF4-201ENST00000374198 HSPA2P54652 639 aa16.02■□□□□ 0.16
PRPF4-201ENST00000374198 ZSCAN23Q3MJ62 389 aa16.02■□□□□ 0.16
PRPF4-201ENST00000374198 LMTK3Q96Q04 1460 aa16.02■□□□□ 0.15
PRPF4-201ENST00000374198 CCDC39Q9UFE4 941 aa16.01■□□□□ 0.15
PRPF4-201ENST00000374198 K7ELQ4 463 aaPredicted RBP16.01■□□□□ 0.15
PRPF4-201ENST00000374198 LETM1O95202 739 aaPredicted RBP16.01■□□□□ 0.15
PRPF4-201ENST00000374198 MVPQ14764 893 aaKnown RBP16.01■□□□□ 0.15
PRPF4-201ENST00000374198 CAVIN1Q6NZI2 390 aaKnown RBP16■□□□□ 0.15
PRPF4-201ENST00000374198 KIF2CQ99661 725 aa16■□□□□ 0.15
PRPF4-201ENST00000374198 RNF17Q9BXT8 1623 aaKnown RBP16■□□□□ 0.15
PRPF4-201ENST00000374198 NPC1L1Q9UHC9 1359 aa16■□□□□ 0.15
PRPF4-201ENST00000374198 CD2BP2O95400 341 aaKnown RBP16■□□□□ 0.15
PRPF4-201ENST00000374198 MYRIPQ8NFW9 859 aa16■□□□□ 0.15
PRPF4-201ENST00000374198 BCL2L13Q9BXK5 485 aa15.99■□□□□ 0.15
PRPF4-201ENST00000374198 SETD1BQ9UPS6 1966 aaKnown RBP15.99■□□□□ 0.15
PRPF4-201ENST00000374198 PREX1Q8TCU6 1659 aa15.99■□□□□ 0.15
PRPF4-201ENST00000374198 PRIM1P49642 420 aaKnown RBP15.99■□□□□ 0.15
PRPF4-201ENST00000374198 BCL11BQ9C0K0 894 aaPredicted RBP15.99■□□□□ 0.15
PRPF4-201ENST00000374198 CBX1P83916 185 aa15.98■□□□□ 0.15
PRPF4-201ENST00000374198 HDAC1Q13547 482 aaPredicted RBP15.98■□□□□ 0.15
PRPF4-201ENST00000374198 KANK1Q14678 1352 aa15.98■□□□□ 0.15
PRPF4-201ENST00000374198 NPATQ14207 1427 aa15.98■□□□□ 0.15
PRPF4-201ENST00000374198 GAS2L2Q8NHY3 880 aa15.97■□□□□ 0.15
PRPF4-201ENST00000374198 FBXO31Q5XUX0 539 aaPredicted RBP15.97■□□□□ 0.15
PRPF4-201ENST00000374198 ZNF710Q8N1W2 664 aa15.97■□□□□ 0.15
PRPF4-201ENST00000374198 SYNMO15061 1565 aa15.96■□□□□ 0.15
PRPF4-201ENST00000374198 MCTP1Q6DN14 999 aa15.96■□□□□ 0.15
PRPF4-201ENST00000374198 ABCC3O15438 1527 aa15.96■□□□□ 0.15
PRPF4-201ENST00000374198 LMBRD1Q9NUN5 540 aa15.96■□□□□ 0.15
PRPF4-201ENST00000374198 NAP1L2Q9ULW6 460 aaPredicted RBP15.96■□□□□ 0.15
PRPF4-201ENST00000374198 MROH1Q8NDA8 1641 aa15.96■□□□□ 0.14
PRPF4-201ENST00000374198 CDCA8Q53HL2 280 aa15.94■□□□□ 0.14
PRPF4-201ENST00000374198 KIAA2012Q0VF49 1180 aa15.94■□□□□ 0.14
PRPF4-201ENST00000374198 PRIMPOLQ96LW4 560 aa15.94■□□□□ 0.14
PRPF4-201ENST00000374198 TMEM51Q9NW97 253 aa15.94■□□□□ 0.14
PRPF4-201ENST00000374198 ZC3H13Q5T200 1668 aaKnown RBP15.94■□□□□ 0.14
PRPF4-201ENST00000374198 CEP152O94986 1710 aa15.93■□□□□ 0.14
PRPF4-201ENST00000374198 FTSJ3Q8IY81 847 aaKnown RBP15.93■□□□□ 0.14
PRPF4-201ENST00000374198 JARID2Q92833 1246 aaPredicted RBP15.93■□□□□ 0.14
PRPF4-201ENST00000374198 GTF2F1P35269 517 aaKnown RBP eCLIP15.93■□□□□ 0.14
PRPF4-201ENST00000374198 ATP2B3Q16720 1220 aa15.93■□□□□ 0.14
PRPF4-201ENST00000374198 ZKSCAN2Q63HK3 967 aa15.93■□□□□ 0.14
PRPF4-201ENST00000374198 DZIP1LQ8IYY4 767 aaKnown RBP15.93■□□□□ 0.14
PRPF4-201ENST00000374198 PDIA4P13667 645 aaKnown RBP15.92■□□□□ 0.14
PRPF4-201ENST00000374198 TNRQ92752 1358 aa15.92■□□□□ 0.14
PRPF4-201ENST00000374198 NEUROD2Q15784 382 aa15.92■□□□□ 0.14
PRPF4-201ENST00000374198 HMGN5P82970 282 aaKnown RBP15.92■□□□□ 0.14
PRPF4-201ENST00000374198 DNTTIP2Q5QJE6 756 aaKnown RBP15.92■□□□□ 0.14
PRPF4-201ENST00000374198 WDR63Q8IWG1 891 aa15.92■□□□□ 0.14
PRPF4-201ENST00000374198 TSC1Q92574 1164 aa15.92■□□□□ 0.14
PRPF4-201ENST00000374198 RBM42Q9BTD8 480 aaKnown RBP15.92■□□□□ 0.14
PRPF4-201ENST00000374198 DEPDC5O75140 1603 aa15.91■□□□□ 0.14
PRPF4-201ENST00000374198 LRSAM1Q6UWE0 723 aa15.91■□□□□ 0.14
PRPF4-201ENST00000374198 NUCB2P80303 420 aa15.91■□□□□ 0.14
PRPF4-201ENST00000374198 PLA2R1Q13018 1463 aa15.91■□□□□ 0.14
PRPF4-201ENST00000374198 TAF3Q5VWG9 929 aa15.9■□□□□ 0.14
PRPF4-201ENST00000374198 PHF23Q9BUL5 403 aaPredicted RBP15.9■□□□□ 0.14
PRPF4-201ENST00000374198 RRP7AQ9Y3A4 280 aaKnown RBP15.9■□□□□ 0.14
PRPF4-201ENST00000374198 KIF16BQ96L93 1317 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms