RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 LMOD2Q6P5Q4 547 aa11.27□□□□□ -0.61
SP140-202ENST00000373645 KRT27Q7Z3Y8 459 aa11.27□□□□□ -0.61
SP140-202ENST00000373645 A0A0G2JS52 829 aa11.26□□□□□ -0.61
SP140-202ENST00000373645 MYT1Q01538 1121 aa11.26□□□□□ -0.61
SP140-202ENST00000373645 SF3B2Q13435 895 aaKnown RBP11.26□□□□□ -0.61
SP140-202ENST00000373645 SBNO1A3KN83 1393 aa11.26□□□□□ -0.61
SP140-202ENST00000373645 TRPM3Q9HCF6 1732 aaPredicted RBP11.26□□□□□ -0.61
SP140-202ENST00000373645 ONECUT3O60422 494 aaPredicted RBP11.25□□□□□ -0.61
SP140-202ENST00000373645 FAM98CQ17RN3 349 aaKnown RBP11.25□□□□□ -0.61
SP140-202ENST00000373645 CFAP70Q5T0N1 1121 aa11.25□□□□□ -0.61
SP140-202ENST00000373645 PMFBP1Q8TBY8 1022 aa11.25□□□□□ -0.61
SP140-202ENST00000373645 PRAM1Q96QH2 718 aa11.25□□□□□ -0.61
SP140-202ENST00000373645 MPHOSPH9Q99550 1183 aa11.25□□□□□ -0.61
SP140-202ENST00000373645 CCER1Q8TC90 406 aaPredicted RBP11.24□□□□□ -0.61
SP140-202ENST00000373645 DHX57Q6P158 1386 aaKnown RBP11.24□□□□□ -0.61
SP140-202ENST00000373645 ALS2Q96Q42 1657 aa11.24□□□□□ -0.61
SP140-202ENST00000373645 EN1Q05925 392 aaPredicted RBP11.23□□□□□ -0.61
SP140-202ENST00000373645 HIRIP3Q9BW71 556 aaPredicted RBP11.23□□□□□ -0.61
SP140-202ENST00000373645 C14orf93Q9H972 538 aaKnown RBP11.23□□□□□ -0.61
SP140-202ENST00000373645 PRR36Q9H6K5 1346 aa11.23□□□□□ -0.61
SP140-202ENST00000373645 ARHGEF10O15013 1369 aa11.23□□□□□ -0.61
SP140-202ENST00000373645 TNS1Q9HBL0 1735 aaKnown RBP11.23□□□□□ -0.61
SP140-202ENST00000373645 CRYBG1Q9Y4K1 1723 aa11.23□□□□□ -0.61
SP140-202ENST00000373645 ADGRB2O60241 1585 aa11.22□□□□□ -0.61
SP140-202ENST00000373645 PSME1Q06323 249 aa11.22□□□□□ -0.61
SP140-202ENST00000373645 BTG4Q9NY30 223 aa11.22□□□□□ -0.61
SP140-202ENST00000373645 THSD7AQ9UPZ6 1657 aa11.22□□□□□ -0.61
SP140-202ENST00000373645 ADGRB1O14514 1584 aa11.21□□□□□ -0.61
SP140-202ENST00000373645 BAG6P46379 1132 aa11.21□□□□□ -0.61
SP140-202ENST00000373645 R3HDM1Q15032 1099 aaKnown RBP11.21□□□□□ -0.61
SP140-202ENST00000373645 AKT1S1Q96B36 256 aa11.21□□□□□ -0.61
SP140-202ENST00000373645 COL14A1Q05707 1796 aaKnown RBP11.21□□□□□ -0.62
SP140-202ENST00000373645 ANKARQ7Z5J8 1434 aa11.2□□□□□ -0.62
SP140-202ENST00000373645 SIRT1Q96EB6 747 aa11.2□□□□□ -0.62
SP140-202ENST00000373645 RGPD1P0DJD0 1748 aa11.2□□□□□ -0.62
SP140-202ENST00000373645 DLC1Q96QB1 1528 aa11.19□□□□□ -0.62
SP140-202ENST00000373645 SPATA31A5Q5VU36 1347 aa11.19□□□□□ -0.62
SP140-202ENST00000373645 SPATA31A7Q8IWB4 1347 aa11.19□□□□□ -0.62
SP140-202ENST00000373645 CLSPNQ9HAW4 1339 aa11.19□□□□□ -0.62
SP140-202ENST00000373645 MINK1Q8N4C8 1332 aaPredicted RBP11.18□□□□□ -0.62
SP140-202ENST00000373645 EZH2Q15910 746 aaKnown RBP11.18□□□□□ -0.62
SP140-202ENST00000373645 TULP4Q9NRJ4 1543 aa11.18□□□□□ -0.62
SP140-202ENST00000373645 DISP2A7MBM2 1401 aa11.18□□□□□ -0.62
SP140-202ENST00000373645 HAX1O00165 279 aa11.17□□□□□ -0.62
SP140-202ENST00000373645 PIP4P2Q8N4L2 257 aa11.17□□□□□ -0.62
SP140-202ENST00000373645 POGKQ9P215 609 aa11.17□□□□□ -0.62
SP140-202ENST00000373645 TRAK1Q9UPV9 953 aa11.17□□□□□ -0.62
SP140-202ENST00000373645 CHRNA2Q15822 529 aa11.16□□□□□ -0.62
SP140-202ENST00000373645 PRDM11Q9NQV5 511 aa11.16□□□□□ -0.62
SP140-202ENST00000373645 GPRASP1Q5JY77 1395 aa11.16□□□□□ -0.62
SP140-202ENST00000373645 KIAA0232Q92628 1395 aa11.16□□□□□ -0.62
SP140-202ENST00000373645 TRIM37O94972 964 aa11.15□□□□□ -0.62
SP140-202ENST00000373645 PHRF1Q9P1Y6 1649 aaKnown RBP11.15□□□□□ -0.62
SP140-202ENST00000373645 SPATA31A1Q5TZJ5 1347 aa11.14□□□□□ -0.63
SP140-202ENST00000373645 ATP7BP35670 1465 aa11.14□□□□□ -0.63
SP140-202ENST00000373645 PAK3O75914 559 aaPredicted RBP11.14□□□□□ -0.63
SP140-202ENST00000373645 KCNA4P22459 653 aa11.14□□□□□ -0.63
SP140-202ENST00000373645 NUTM2GQ5VZR2 741 aa11.14□□□□□ -0.63
SP140-202ENST00000373645 CAMKK2Q96RR4 588 aa11.14□□□□□ -0.63
SP140-202ENST00000373645 STRN4Q9NRL3 753 aa11.14□□□□□ -0.63
SP140-202ENST00000373645 NUP188Q5SRE5 1749 aa11.12□□□□□ -0.63
SP140-202ENST00000373645 RREB1Q92766 1687 aa11.12□□□□□ -0.63
SP140-202ENST00000373645 WASLO00401 505 aaPredicted RBP11.12□□□□□ -0.63
SP140-202ENST00000373645 NGDNQ8NEJ9 315 aaKnown RBP11.12□□□□□ -0.63
SP140-202ENST00000373645 USP35Q9P2H5 1018 aa11.12□□□□□ -0.63
SP140-202ENST00000373645 ARHGEF28Q8N1W1 1705 aaKnown RBP11.12□□□□□ -0.63
SP140-202ENST00000373645 ZC3H6P61129 1189 aaKnown RBP11.11□□□□□ -0.63
SP140-202ENST00000373645 SIN3AQ96ST3 1273 aa11.11□□□□□ -0.63
SP140-202ENST00000373645 KDM2AQ9Y2K7 1162 aa11.11□□□□□ -0.63
SP140-202ENST00000373645 NRKQ7Z2Y5 1582 aa11.11□□□□□ -0.63
SP140-202ENST00000373645 SSH2Q76I76 1423 aa11.1□□□□□ -0.63
SP140-202ENST00000373645 APBA3O96018 575 aa11.1□□□□□ -0.63
SP140-202ENST00000373645 NEUROD1Q13562 356 aa11.1□□□□□ -0.63
SP140-202ENST00000373645 CAMTA1Q9Y6Y1 1673 aa11.1□□□□□ -0.63
SP140-202ENST00000373645 TOPAZ1Q8N9V7 1692 aa11.09□□□□□ -0.63
SP140-202ENST00000373645 EIF3AQ14152 1382 aaKnown RBP11.09□□□□□ -0.63
SP140-202ENST00000373645 ZEB1P37275 1124 aaPredicted RBP11.09□□□□□ -0.63
SP140-202ENST00000373645 FAM196AQ6ZSG2 479 aa11.09□□□□□ -0.63
SP140-202ENST00000373645 REM2Q8IYK8 340 aaPredicted RBP11.09□□□□□ -0.63
SP140-202ENST00000373645 ITSN1Q15811 1721 aa11.09□□□□□ -0.63
SP140-202ENST00000373645 LMO7Q8WWI1 1683 aa11.08□□□□□ -0.64
SP140-202ENST00000373645 MYCNP04198 464 aaPredicted RBP11.08□□□□□ -0.64
SP140-202ENST00000373645 LARP1Q6PKG0 1096 aaKnown RBP11.08□□□□□ -0.64
SP140-202ENST00000373645 NUDT16Q96DE0 195 aaKnown RBP11.08□□□□□ -0.64
SP140-202ENST00000373645 DCAF11Q8TEB1 546 aa11.07□□□□□ -0.64
SP140-202ENST00000373645 TIMELESSQ9UNS1 1208 aa11.07□□□□□ -0.64
SP140-202ENST00000373645 ACEP12821 1306 aa11.06□□□□□ -0.64
SP140-202ENST00000373645 POLR3AO14802 1390 aaPredicted RBP11.05□□□□□ -0.64
SP140-202ENST00000373645 PARD3Q8TEW0 1356 aa11.05□□□□□ -0.64
SP140-202ENST00000373645 YY1P25490 414 aa11.05□□□□□ -0.64
SP140-202ENST00000373645 BARGINQ6ZT62 677 aa11.05□□□□□ -0.64
SP140-202ENST00000373645 PTF1AQ7RTS3 328 aa11.05□□□□□ -0.64
SP140-202ENST00000373645 CDK19Q9BWU1 502 aa11.05□□□□□ -0.64
SP140-202ENST00000373645 ZBTB12Q9Y330 459 aaPredicted RBP11.05□□□□□ -0.64
SP140-202ENST00000373645 USP19O94966 1318 aa11.05□□□□□ -0.64
SP140-202ENST00000373645 PEAK1Q9H792 1746 aa11.04□□□□□ -0.64
SP140-202ENST00000373645 PDE3BQ13370 1112 aa11.04□□□□□ -0.64
SP140-202ENST00000373645 TCP11L2Q8N4U5 519 aa11.04□□□□□ -0.64
SP140-202ENST00000373645 ANO8Q9HCE9 1232 aaPredicted RBP11.04□□□□□ -0.64
SP140-202ENST00000373645 COL5A2P05997 1499 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms