RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 PLEKHH1Q9ULM0 1364 aa19.12■□□□□ 0.65
HDAC8-204ENST00000373560 CASZ1Q86V15 1759 aa19.11■□□□□ 0.65
HDAC8-204ENST00000373560 WAPLQ7Z5K2 1190 aa19.1■□□□□ 0.65
HDAC8-204ENST00000373560 CRYBG1Q9Y4K1 1723 aa19.09■□□□□ 0.65
HDAC8-204ENST00000373560 BTG4Q9NY30 223 aa19.09■□□□□ 0.65
HDAC8-204ENST00000373560 KNDC1Q76NI1 1749 aa19.08■□□□□ 0.65
HDAC8-204ENST00000373560 APBA3O96018 575 aa19.08■□□□□ 0.64
HDAC8-204ENST00000373560 SPON1Q9HCB6 807 aa19.08■□□□□ 0.64
HDAC8-204ENST00000373560 TRPM3Q9HCF6 1732 aaPredicted RBP19.08■□□□□ 0.64
HDAC8-204ENST00000373560 SPATA31A5Q5VU36 1347 aa19.07■□□□□ 0.64
HDAC8-204ENST00000373560 SPATA31A7Q8IWB4 1347 aa19.07■□□□□ 0.64
HDAC8-204ENST00000373560 KCNQ2O43526 872 aa19.07■□□□□ 0.64
HDAC8-204ENST00000373560 PARD3Q8TEW0 1356 aa19.06■□□□□ 0.64
HDAC8-204ENST00000373560 CHD4Q14839 1912 aa19.06■□□□□ 0.64
HDAC8-204ENST00000373560 CEP350Q5VT06 3117 aa19.06■□□□□ 0.64
HDAC8-204ENST00000373560 ALS2Q96Q42 1657 aa19.05■□□□□ 0.64
HDAC8-204ENST00000373560 NRXN1Q9ULB1 1477 aa19.04■□□□□ 0.64
HDAC8-204ENST00000373560 TECPR2O15040 1411 aa19.04■□□□□ 0.64
HDAC8-204ENST00000373560 LMOD2Q6P5Q4 547 aa19.04■□□□□ 0.64
HDAC8-204ENST00000373560 SBNO1A3KN83 1393 aa19.03■□□□□ 0.64
HDAC8-204ENST00000373560 ROCK1Q13464 1354 aa19.03■□□□□ 0.64
HDAC8-204ENST00000373560 ATF5Q9Y2D1 282 aaPredicted RBP19.02■□□□□ 0.64
HDAC8-204ENST00000373560 PDGFDQ9GZP0 370 aaPredicted RBP19.01■□□□□ 0.63
HDAC8-204ENST00000373560 STK26Q9P289 416 aa19.01■□□□□ 0.63
HDAC8-204ENST00000373560 ZNF219Q9P2Y4 722 aaPredicted RBP19.01■□□□□ 0.63
HDAC8-204ENST00000373560 ATXN8OSP0DMR3 200 aa19■□□□□ 0.63
HDAC8-204ENST00000373560 ARHGEF10O15013 1369 aa19■□□□□ 0.63
HDAC8-204ENST00000373560 RRBP1Q9P2E9 1410 aaKnown RBP19■□□□□ 0.63
HDAC8-204ENST00000373560 LOC105371045A0A1W2PR82 267 aa18.99■□□□□ 0.63
HDAC8-204ENST00000373560 VGFO15240 615 aaPredicted RBP18.99■□□□□ 0.63
HDAC8-204ENST00000373560 PHF8Q9UPP1 1060 aa18.99■□□□□ 0.63
HDAC8-204ENST00000373560 FAM196AQ6ZSG2 479 aa18.98■□□□□ 0.63
HDAC8-204ENST00000373560 ANO8Q9HCE9 1232 aaPredicted RBP18.98■□□□□ 0.63
HDAC8-204ENST00000373560 NBPF8Q3BBV2 869 aa18.97■□□□□ 0.63
HDAC8-204ENST00000373560 NBPF14Q5TI25 921 aa18.97■□□□□ 0.63
HDAC8-204ENST00000373560 SPATA31A1Q5TZJ5 1347 aa18.96■□□□□ 0.63
HDAC8-204ENST00000373560 PSME1Q06323 249 aa18.95■□□□□ 0.62
HDAC8-204ENST00000373560 ADGRF5Q8IZF2 1346 aa18.94■□□□□ 0.62
HDAC8-204ENST00000373560 RGPD3A6NKT7 1758 aaPredicted RBP18.93■□□□□ 0.62
HDAC8-204ENST00000373560 RGPD4Q7Z3J3 1758 aa18.93■□□□□ 0.62
HDAC8-204ENST00000373560 PTGER2P43116 358 aa18.92■□□□□ 0.62
HDAC8-204ENST00000373560 TMEM132EQ6IEE7 984 aa18.92■□□□□ 0.62
HDAC8-204ENST00000373560 PHRF1Q9P1Y6 1649 aaKnown RBP18.92■□□□□ 0.62
HDAC8-204ENST00000373560 ZBTB7AO95365 584 aa18.91■□□□□ 0.62
HDAC8-204ENST00000373560 PMFBP1Q8TBY8 1022 aa18.91■□□□□ 0.62
HDAC8-204ENST00000373560 ABCC11Q96J66 1382 aa18.91■□□□□ 0.62
HDAC8-204ENST00000373560 SHANK3Q9BYB0 1731 aa18.91■□□□□ 0.62
HDAC8-204ENST00000373560 PEAK1Q9H792 1746 aa18.9■□□□□ 0.62
HDAC8-204ENST00000373560 SBF2Q86WG5 1849 aa18.9■□□□□ 0.62
HDAC8-204ENST00000373560 FHDC1Q9C0D6 1143 aaPredicted RBP18.88■□□□□ 0.61
HDAC8-204ENST00000373560 CHRNA2Q15822 529 aa18.87■□□□□ 0.61
HDAC8-204ENST00000373560 RPGRIP1LQ68CZ1 1315 aa18.87■□□□□ 0.61
HDAC8-204ENST00000373560 YTHDC2Q9H6S0 1430 aaKnown RBP18.87■□□□□ 0.61
HDAC8-204ENST00000373560 STRN4Q9NRL3 753 aa18.87■□□□□ 0.61
HDAC8-204ENST00000373560 GIGYF1O75420 1035 aaPredicted RBP18.86■□□□□ 0.61
HDAC8-204ENST00000373560 ITGAEP38570 1179 aa18.86■□□□□ 0.61
HDAC8-204ENST00000373560 SYT17Q9BSW7 474 aa18.86■□□□□ 0.61
HDAC8-204ENST00000373560 PRDM11Q9NQV5 511 aa18.86■□□□□ 0.61
HDAC8-204ENST00000373560 USP35Q9P2H5 1018 aa18.86■□□□□ 0.61
HDAC8-204ENST00000373560 PARP4Q9UKK3 1724 aaKnown RBP18.86■□□□□ 0.61
HDAC8-204ENST00000373560 DLC1Q96QB1 1528 aa18.85■□□□□ 0.61
HDAC8-204ENST00000373560 KIAA0232Q92628 1395 aa18.85■□□□□ 0.61
HDAC8-204ENST00000373560 ABCB7O75027 752 aa18.85■□□□□ 0.61
HDAC8-204ENST00000373560 PTF1AQ7RTS3 328 aa18.84■□□□□ 0.61
HDAC8-204ENST00000373560 DSG3P32926 999 aa18.82■□□□□ 0.6
HDAC8-204ENST00000373560 PDE3BQ13370 1112 aa18.82■□□□□ 0.6
HDAC8-204ENST00000373560 SSH2Q76I76 1423 aa18.82■□□□□ 0.6
HDAC8-204ENST00000373560 SAFB2Q14151 953 aaKnown RBP eCLIP18.81■□□□□ 0.6
HDAC8-204ENST00000373560 PIK3C2GO75747 1445 aa18.81■□□□□ 0.6
HDAC8-204ENST00000373560 LRRC37A3O60309 1634 aa18.81■□□□□ 0.6
HDAC8-204ENST00000373560 LMO7Q8WWI1 1683 aa18.8■□□□□ 0.6
HDAC8-204ENST00000373560 ANKARQ7Z5J8 1434 aa18.8■□□□□ 0.6
HDAC8-204ENST00000373560 ACIN1Q9UKV3 1341 aaKnown RBP18.79■□□□□ 0.6
HDAC8-204ENST00000373560 SGIP1Q9BQI5 828 aa18.79■□□□□ 0.6
HDAC8-204ENST00000373560 BARGINQ6ZT62 677 aa18.78■□□□□ 0.6
HDAC8-204ENST00000373560 PRR36Q9H6K5 1346 aa18.77■□□□□ 0.6
HDAC8-204ENST00000373560 PROM2Q8N271 834 aa18.77■□□□□ 0.6
HDAC8-204ENST00000373560 GOLGB1Q14789 3259 aaKnown RBP18.76■□□□□ 0.59
HDAC8-204ENST00000373560 LARP1Q6PKG0 1096 aaKnown RBP18.76■□□□□ 0.59
HDAC8-204ENST00000373560 SPATA31E1Q6ZUB1 1445 aa18.74■□□□□ 0.59
HDAC8-204ENST00000373560 ZC3H6P61129 1189 aaKnown RBP18.74■□□□□ 0.59
HDAC8-204ENST00000373560 OVOS2A0A0G2JMS6 1433 aa18.74■□□□□ 0.59
HDAC8-204ENST00000373560 OVOS2A0A0J9YW53 1432 aa18.74■□□□□ 0.59
HDAC8-204ENST00000373560 OVOS2Q6IE36 1432 aa18.74■□□□□ 0.59
HDAC8-204ENST00000373560 GPRASP1Q5JY77 1395 aa18.73■□□□□ 0.59
HDAC8-204ENST00000373560 WNK3Q9BYP7 1800 aa18.73■□□□□ 0.59
HDAC8-204ENST00000373560 PRAM1Q96QH2 718 aa18.73■□□□□ 0.59
HDAC8-204ENST00000373560 BCL11BQ9C0K0 894 aaPredicted RBP18.73■□□□□ 0.59
HDAC8-204ENST00000373560 PLSCR1O15162 318 aa18.72■□□□□ 0.59
HDAC8-204ENST00000373560 POLA2Q14181 598 aa18.72■□□□□ 0.59
HDAC8-204ENST00000373560 ATP7BP35670 1465 aa18.71■□□□□ 0.59
HDAC8-204ENST00000373560 TULP4Q9NRJ4 1543 aa18.71■□□□□ 0.59
HDAC8-204ENST00000373560 PAK3O75914 559 aaPredicted RBP18.71■□□□□ 0.59
HDAC8-204ENST00000373560 RGL3Q3MIN7 710 aa18.71■□□□□ 0.59
HDAC8-204ENST00000373560 TCP11L2Q8N4U5 519 aa18.71■□□□□ 0.59
HDAC8-204ENST00000373560 SIRT1Q96EB6 747 aa18.7■□□□□ 0.58
HDAC8-204ENST00000373560 NUTM2GQ5VZR2 741 aa18.69■□□□□ 0.58
HDAC8-204ENST00000373560 HIRIP3Q9BW71 556 aaPredicted RBP18.69■□□□□ 0.58
HDAC8-204ENST00000373560 PAPPAQ13219 1627 aa18.69■□□□□ 0.58
HDAC8-204ENST00000373560 MAP3K5Q99683 1374 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms