RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 CCDC125Q86Z20 511 aa23.45■■□□□ 1.34
HDAC8-202ENST00000373556 CDK19Q9BWU1 502 aa23.44■■□□□ 1.34
HDAC8-202ENST00000373556 BTG4Q9NY30 223 aa23.44■■□□□ 1.34
HDAC8-202ENST00000373556 NBPF1Q3BBV0 1214 aa23.43■■□□□ 1.34
HDAC8-202ENST00000373556 TOPAZ1Q8N9V7 1692 aa23.43■■□□□ 1.34
HDAC8-202ENST00000373556 ONECUT3O60422 494 aaPredicted RBP23.41■■□□□ 1.34
HDAC8-202ENST00000373556 BLMP54132 1417 aaPredicted RBP23.4■■□□□ 1.34
HDAC8-202ENST00000373556 A0A0G2JS52 829 aa23.39■■□□□ 1.33
HDAC8-202ENST00000373556 MYT1Q01538 1121 aa23.39■■□□□ 1.33
HDAC8-202ENST00000373556 ZRANB1Q9UGI0 708 aa23.39■■□□□ 1.33
HDAC8-202ENST00000373556 PHRF1Q9P1Y6 1649 aaKnown RBP23.38■■□□□ 1.33
HDAC8-202ENST00000373556 KRT27Q7Z3Y8 459 aa23.38■■□□□ 1.33
HDAC8-202ENST00000373556 FAM98CQ17RN3 349 aaKnown RBP23.37■■□□□ 1.33
HDAC8-202ENST00000373556 SRCAPQ6ZRS2 3230 aa23.37■■□□□ 1.33
HDAC8-202ENST00000373556 ACEP12821 1306 aa23.36■■□□□ 1.33
HDAC8-202ENST00000373556 NUTM2GQ5VZR2 741 aa23.36■■□□□ 1.33
HDAC8-202ENST00000373556 PRDM11Q9NQV5 511 aa23.36■■□□□ 1.33
HDAC8-202ENST00000373556 DEFB132Q7Z7B7 95 aa23.35■■□□□ 1.33
HDAC8-202ENST00000373556 POLR3AO14802 1390 aaPredicted RBP23.35■■□□□ 1.33
HDAC8-202ENST00000373556 NBPF8Q3BBV2 869 aa23.34■■□□□ 1.33
HDAC8-202ENST00000373556 CCDC61Q9Y6R9 512 aa23.34■■□□□ 1.33
HDAC8-202ENST00000373556 KIAA0232Q92628 1395 aa23.34■■□□□ 1.33
HDAC8-202ENST00000373556 SPATA31A5Q5VU36 1347 aa23.33■■□□□ 1.32
HDAC8-202ENST00000373556 SPATA31A7Q8IWB4 1347 aa23.33■■□□□ 1.32
HDAC8-202ENST00000373556 QRICH2Q9H0J4 1663 aa23.32■■□□□ 1.32
HDAC8-202ENST00000373556 SF3B2Q13435 895 aaKnown RBP23.32■■□□□ 1.32
HDAC8-202ENST00000373556 CHRNA2Q15822 529 aa23.32■■□□□ 1.32
HDAC8-202ENST00000373556 CENPJQ9HC77 1338 aaPredicted RBP23.32■■□□□ 1.32
HDAC8-202ENST00000373556 PLEKHG3A1L390 1219 aa23.31■■□□□ 1.32
HDAC8-202ENST00000373556 ZC3H6P61129 1189 aaKnown RBP23.31■■□□□ 1.32
HDAC8-202ENST00000373556 SRPK2P78362 688 aaKnown RBP23.31■■□□□ 1.32
HDAC8-202ENST00000373556 L3MBTL2Q969R5 705 aa23.3■■□□□ 1.32
HDAC8-202ENST00000373556 PPIP5K1Q6PFW1 1433 aa23.29■■□□□ 1.32
HDAC8-202ENST00000373556 CABP2Q9NPB3 220 aa23.29■■□□□ 1.32
HDAC8-202ENST00000373556 THSD7AQ9UPZ6 1657 aa23.28■■□□□ 1.32
HDAC8-202ENST00000373556 NRKQ7Z2Y5 1582 aa23.28■■□□□ 1.32
HDAC8-202ENST00000373556 FAM182BQ5T319 152 aa23.28■■□□□ 1.32
HDAC8-202ENST00000373556 SIN3AQ96ST3 1273 aa23.28■■□□□ 1.32
HDAC8-202ENST00000373556 STRN4Q9NRL3 753 aa23.28■■□□□ 1.32
HDAC8-202ENST00000373556 ABTB2Q8N961 1025 aa23.27■■□□□ 1.32
HDAC8-202ENST00000373556 TRPM1Q7Z4N2 1603 aa23.26■■□□□ 1.31
HDAC8-202ENST00000373556 SPATA31A1Q5TZJ5 1347 aa23.25■■□□□ 1.31
HDAC8-202ENST00000373556 NEUROD1Q13562 356 aa23.23■■□□□ 1.31
HDAC8-202ENST00000373556 RGPD1P0DJD0 1748 aa23.22■■□□□ 1.31
HDAC8-202ENST00000373556 USP19O94966 1318 aa23.22■■□□□ 1.31
HDAC8-202ENST00000373556 USP35Q9P2H5 1018 aa23.21■■□□□ 1.31
HDAC8-202ENST00000373556 CAMTA1Q9Y6Y1 1673 aa23.21■■□□□ 1.31
HDAC8-202ENST00000373556 SSH2Q76I76 1423 aa23.2■■□□□ 1.3
HDAC8-202ENST00000373556 BAG6P46379 1132 aa23.2■■□□□ 1.3
HDAC8-202ENST00000373556 CABP1Q9NZU7 370 aa23.2■■□□□ 1.3
HDAC8-202ENST00000373556 LMO7Q8WWI1 1683 aa23.19■■□□□ 1.3
HDAC8-202ENST00000373556 EVA1CP58658 441 aa23.19■■□□□ 1.3
HDAC8-202ENST00000373556 CPDO75976 1380 aa23.18■■□□□ 1.3
HDAC8-202ENST00000373556 NLRP13Q86W25 1043 aa23.18■■□□□ 1.3
HDAC8-202ENST00000373556 USP6P35125 1406 aa23.17■■□□□ 1.3
HDAC8-202ENST00000373556 TNS1Q9HBL0 1735 aaKnown RBP23.17■■□□□ 1.3
HDAC8-202ENST00000373556 GCP02774 474 aa23.17■■□□□ 1.3
HDAC8-202ENST00000373556 ROCK2O75116 1388 aaKnown RBP23.16■■□□□ 1.3
HDAC8-202ENST00000373556 EN1Q05925 392 aaPredicted RBP23.16■■□□□ 1.3
HDAC8-202ENST00000373556 LARP1Q6PKG0 1096 aaKnown RBP23.16■■□□□ 1.3
HDAC8-202ENST00000373556 EVC2Q86UK5 1308 aa23.15■■□□□ 1.3
HDAC8-202ENST00000373556 BRD4O60885 1362 aaPredicted RBP23.14■■□□□ 1.3
HDAC8-202ENST00000373556 ZBTB7CA1YPR0 619 aa23.14■■□□□ 1.29
HDAC8-202ENST00000373556 PSDA5PKW4 1024 aaPredicted RBP23.13■■□□□ 1.29
HDAC8-202ENST00000373556 NLRP6P59044 892 aa23.13■■□□□ 1.29
HDAC8-202ENST00000373556 PIK3C2AO00443 1686 aa23.13■■□□□ 1.29
HDAC8-202ENST00000373556 BARGINQ6ZT62 677 aa23.11■■□□□ 1.29
HDAC8-202ENST00000373556 SLIT3O75094 1523 aa23.11■■□□□ 1.29
HDAC8-202ENST00000373556 COL5A2P05997 1499 aaPredicted RBP23.11■■□□□ 1.29
HDAC8-202ENST00000373556 TRIM37O94972 964 aa23.1■■□□□ 1.29
HDAC8-202ENST00000373556 TCP11L2Q8N4U5 519 aa23.1■■□□□ 1.29
HDAC8-202ENST00000373556 AKAP12Q02952 1782 aa23.09■■□□□ 1.29
HDAC8-202ENST00000373556 FAM196AQ6ZSG2 479 aa23.09■■□□□ 1.29
HDAC8-202ENST00000373556 DISP2A7MBM2 1401 aa23.08■■□□□ 1.29
HDAC8-202ENST00000373556 PDE3BQ13370 1112 aa23.08■■□□□ 1.29
HDAC8-202ENST00000373556 EZH2Q15910 746 aaKnown RBP23.07■■□□□ 1.28
HDAC8-202ENST00000373556 LRP5O75197 1615 aa23.06■■□□□ 1.28
HDAC8-202ENST00000373556 PARP4Q9UKK3 1724 aaKnown RBP23.05■■□□□ 1.28
HDAC8-202ENST00000373556 COL18A1P39060 1754 aa23.05■■□□□ 1.28
HDAC8-202ENST00000373556 CRB1P82279 1406 aa23.05■■□□□ 1.28
HDAC8-202ENST00000373556 AATKQ6ZMQ8 1374 aa23.04■■□□□ 1.28
HDAC8-202ENST00000373556 THRAP3Q9Y2W1 955 aaKnown RBP23.04■■□□□ 1.28
HDAC8-202ENST00000373556 TTC21BQ7Z4L5 1316 aa23.04■■□□□ 1.28
HDAC8-202ENST00000373556 APBA3O96018 575 aa23.03■■□□□ 1.28
HDAC8-202ENST00000373556 CAMKK2Q96RR4 588 aa23.03■■□□□ 1.28
HDAC8-202ENST00000373556 SOX12O15370 315 aa23.02■■□□□ 1.28
HDAC8-202ENST00000373556 R3HDM1Q15032 1099 aaKnown RBP23.02■■□□□ 1.28
HDAC8-202ENST00000373556 ZNF692Q9BU19 519 aaPredicted RBP23.02■■□□□ 1.28
HDAC8-202ENST00000373556 RGPD5Q99666 1765 aa23.01■■□□□ 1.27
HDAC8-202ENST00000373556 AXIN2Q9Y2T1 843 aa23.01■■□□□ 1.27
HDAC8-202ENST00000373556 CPSF1Q10570 1443 aaKnown RBP23■■□□□ 1.27
HDAC8-202ENST00000373556 CARD11Q9BXL7 1154 aa23■■□□□ 1.27
HDAC8-202ENST00000373556 KTN1Q86UP2 1357 aaKnown RBP23■■□□□ 1.27
HDAC8-202ENST00000373556 MON2Q7Z3U7 1717 aa22.99■■□□□ 1.27
HDAC8-202ENST00000373556 TOM1L2Q6ZVM7 507 aa22.99■■□□□ 1.27
HDAC8-202ENST00000373556 LRRC37A3O60309 1634 aa22.99■■□□□ 1.27
HDAC8-202ENST00000373556 RREB1Q92766 1687 aa22.98■■□□□ 1.27
HDAC8-202ENST00000373556 TTC21AQ8NDW8 1320 aa22.98■■□□□ 1.27
HDAC8-202ENST00000373556 WNK3Q9BYP7 1800 aa22.98■■□□□ 1.27
HDAC8-202ENST00000373556 ARHGEF25Q86VW2 580 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms