RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 TESK2Q96S53 571 aa16.9■□□□□ 0.3
HDAC8-201ENST00000373554 MARF1Q9Y4F3 1742 aaKnown RBP16.9■□□□□ 0.3
HDAC8-201ENST00000373554 PLEKHG5O94827 1062 aa16.89■□□□□ 0.29
HDAC8-201ENST00000373554 BRD4O60885 1362 aaPredicted RBP16.89■□□□□ 0.29
HDAC8-201ENST00000373554 USP6P35125 1406 aa16.88■□□□□ 0.29
HDAC8-201ENST00000373554 CABLES1Q8TDN4 633 aa16.88■□□□□ 0.29
HDAC8-201ENST00000373554 POTEAQ6S8J7 498 aa16.87■□□□□ 0.29
HDAC8-201ENST00000373554 TMF1P82094 1093 aa16.86■□□□□ 0.29
HDAC8-201ENST00000373554 PUS7Q96PZ0 661 aaKnown RBP16.86■□□□□ 0.29
HDAC8-201ENST00000373554 AKAP12Q02952 1782 aa16.85■□□□□ 0.29
HDAC8-201ENST00000373554 ZNF692Q9BU19 519 aaPredicted RBP16.85■□□□□ 0.29
HDAC8-201ENST00000373554 CRYBG1Q9Y4K1 1723 aa16.84■□□□□ 0.29
HDAC8-201ENST00000373554 ABTB2Q8N961 1025 aa16.84■□□□□ 0.29
HDAC8-201ENST00000373554 TMC1Q8TDI8 760 aa16.84■□□□□ 0.29
HDAC8-201ENST00000373554 USP21Q9UK80 565 aa16.84■□□□□ 0.29
HDAC8-201ENST00000373554 NINLQ9Y2I6 1382 aa16.84■□□□□ 0.29
HDAC8-201ENST00000373554 CPSF1Q10570 1443 aaKnown RBP16.84■□□□□ 0.29
HDAC8-201ENST00000373554 KTN1Q86UP2 1357 aaKnown RBP16.83■□□□□ 0.28
HDAC8-201ENST00000373554 FNBP4Q8N3X1 1017 aaPredicted RBP16.83■□□□□ 0.28
HDAC8-201ENST00000373554 PHRF1Q9P1Y6 1649 aaKnown RBP16.83■□□□□ 0.28
HDAC8-201ENST00000373554 NRKQ7Z2Y5 1582 aa16.82■□□□□ 0.28
HDAC8-201ENST00000373554 SSH2Q76I76 1423 aa16.82■□□□□ 0.28
HDAC8-201ENST00000373554 CDCA8Q53HL2 280 aa16.82■□□□□ 0.28
HDAC8-201ENST00000373554 NUTM2GQ5VZR2 741 aa16.82■□□□□ 0.28
HDAC8-201ENST00000373554 HDGFL2Q7Z4V5 671 aaPredicted RBP16.82■□□□□ 0.28
HDAC8-201ENST00000373554 MON2Q7Z3U7 1717 aa16.82■□□□□ 0.28
HDAC8-201ENST00000373554 EIF4G2P78344 907 aaKnown RBP eCLIP16.81■□□□□ 0.28
HDAC8-201ENST00000373554 SLIT2O94813 1529 aa16.8■□□□□ 0.28
HDAC8-201ENST00000373554 NLRP13Q86W25 1043 aa16.8■□□□□ 0.28
HDAC8-201ENST00000373554 TERF2IPQ9NYB0 399 aa16.8■□□□□ 0.28
HDAC8-201ENST00000373554 PLCH1Q4KWH8 1693 aa16.8■□□□□ 0.28
HDAC8-201ENST00000373554 BCL9LQ86UU0 1499 aa16.8■□□□□ 0.28
HDAC8-201ENST00000373554 CD163L1Q9NR16 1453 aa16.8■□□□□ 0.28
HDAC8-201ENST00000373554 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.79■□□□□ 0.28
HDAC8-201ENST00000373554 PIK3C2AO00443 1686 aa16.79■□□□□ 0.28
HDAC8-201ENST00000373554 USP19O94966 1318 aa16.79■□□□□ 0.28
HDAC8-201ENST00000373554 TTC21BQ7Z4L5 1316 aa16.79■□□□□ 0.28
HDAC8-201ENST00000373554 TTC21AQ8NDW8 1320 aa16.79■□□□□ 0.28
HDAC8-201ENST00000373554 RXRBP28702 533 aa16.79■□□□□ 0.28
HDAC8-201ENST00000373554 SLC12A5Q9H2X9 1139 aa16.79■□□□□ 0.28
HDAC8-201ENST00000373554 QTRT2Q9H974 415 aaKnown RBP16.79■□□□□ 0.28
HDAC8-201ENST00000373554 TRPC5Q9UL62 973 aaPredicted RBP16.79■□□□□ 0.28
HDAC8-201ENST00000373554 A0A1W2PP64 1363 aa16.78■□□□□ 0.28
HDAC8-201ENST00000373554 NLRP6P59044 892 aa16.78■□□□□ 0.28
HDAC8-201ENST00000373554 COL14A1Q05707 1796 aaKnown RBP16.78■□□□□ 0.28
HDAC8-201ENST00000373554 NWD2Q9ULI1 1742 aa16.78■□□□□ 0.28
HDAC8-201ENST00000373554 PRDM11Q9NQV5 511 aa16.77■□□□□ 0.28
HDAC8-201ENST00000373554 ATRNO75882 1429 aa16.77■□□□□ 0.27
HDAC8-201ENST00000373554 EDC4Q6P2E9 1401 aaKnown RBP16.77■□□□□ 0.27
HDAC8-201ENST00000373554 KIAA0232Q92628 1395 aa16.77■□□□□ 0.27
HDAC8-201ENST00000373554 CDK12Q9NYV4 1490 aaPredicted RBP16.76■□□□□ 0.27
HDAC8-201ENST00000373554 HSPA5P11021 654 aaKnown RBP16.76■□□□□ 0.27
HDAC8-201ENST00000373554 RBM6P78332 1123 aaKnown RBP16.76■□□□□ 0.27
HDAC8-201ENST00000373554 UNC5CLQ8IV45 518 aa16.76■□□□□ 0.27
HDAC8-201ENST00000373554 SLIT3O75094 1523 aa16.75■□□□□ 0.27
HDAC8-201ENST00000373554 FAM83GA6ND36 823 aa16.75■□□□□ 0.27
HDAC8-201ENST00000373554 ANKRD36BQ8N2N9 1353 aa16.75■□□□□ 0.27
HDAC8-201ENST00000373554 ZC3H6P61129 1189 aaKnown RBP16.74■□□□□ 0.27
HDAC8-201ENST00000373554 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.74■□□□□ 0.27
HDAC8-201ENST00000373554 GCP02774 474 aa16.73■□□□□ 0.27
HDAC8-201ENST00000373554 BTG4Q9NY30 223 aa16.73■□□□□ 0.27
HDAC8-201ENST00000373554 CPDO75976 1380 aa16.73■□□□□ 0.27
HDAC8-201ENST00000373554 NRAPQ86VF7 1730 aa16.73■□□□□ 0.27
HDAC8-201ENST00000373554 MYOM1P52179 1685 aa16.72■□□□□ 0.27
HDAC8-201ENST00000373554 RGS12O14924 1447 aa16.71■□□□□ 0.27
HDAC8-201ENST00000373554 KCNH5Q8NCM2 988 aa16.71■□□□□ 0.27
HDAC8-201ENST00000373554 GJD4Q96KN9 370 aaPredicted RBP16.71■□□□□ 0.27
HDAC8-201ENST00000373554 USP54Q70EL1 1684 aa16.71■□□□□ 0.27
HDAC8-201ENST00000373554 USP31Q70CQ4 1352 aa16.7■□□□□ 0.26
HDAC8-201ENST00000373554 CHRNA2Q15822 529 aa16.7■□□□□ 0.26
HDAC8-201ENST00000373554 VPS72Q15906 364 aa16.7■□□□□ 0.26
HDAC8-201ENST00000373554 NME9Q86XW9 330 aa16.7■□□□□ 0.26
HDAC8-201ENST00000373554 POLR3GLQ9BT43 218 aa16.7■□□□□ 0.26
HDAC8-201ENST00000373554 CCDC9Q9Y3X0 531 aaKnown RBP16.7■□□□□ 0.26
HDAC8-201ENST00000373554 GLI3P10071 1580 aa16.68■□□□□ 0.26
HDAC8-201ENST00000373554 SRCAPQ6ZRS2 3230 aa16.68■□□□□ 0.26
HDAC8-201ENST00000373554 LMO7Q8WWI1 1683 aa16.68■□□□□ 0.26
HDAC8-201ENST00000373554 ZBTB7CA1YPR0 619 aa16.67■□□□□ 0.26
HDAC8-201ENST00000373554 SOX12O15370 315 aa16.67■□□□□ 0.26
HDAC8-201ENST00000373554 OVOS2A0A0J9YW53 1432 aa16.67■□□□□ 0.26
HDAC8-201ENST00000373554 OVOS2Q6IE36 1432 aa16.67■□□□□ 0.26
HDAC8-201ENST00000373554 NFAT5O94916 1531 aa16.66■□□□□ 0.26
HDAC8-201ENST00000373554 ZRANB1Q9UGI0 708 aa16.66■□□□□ 0.26
HDAC8-201ENST00000373554 AATKQ6ZMQ8 1374 aa16.65■□□□□ 0.26
HDAC8-201ENST00000373554 STRN4Q9NRL3 753 aa16.65■□□□□ 0.26
HDAC8-201ENST00000373554 CAMTA1Q9Y6Y1 1673 aa16.65■□□□□ 0.26
HDAC8-201ENST00000373554 EVA1CP58658 441 aa16.64■□□□□ 0.25
HDAC8-201ENST00000373554 COG3Q96JB2 828 aa16.64■□□□□ 0.25
HDAC8-201ENST00000373554 NSD3Q9BZ95 1437 aa16.63■□□□□ 0.25
HDAC8-201ENST00000373554 COL5A2P05997 1499 aaPredicted RBP16.63■□□□□ 0.25
HDAC8-201ENST00000373554 ARHGEF25Q86VW2 580 aa16.63■□□□□ 0.25
HDAC8-201ENST00000373554 ABCC6O95255 1503 aa16.63■□□□□ 0.25
HDAC8-201ENST00000373554 KIF20BQ96Q89 1820 aa16.62■□□□□ 0.25
HDAC8-201ENST00000373554 SPATA31A5Q5VU36 1347 aa16.62■□□□□ 0.25
HDAC8-201ENST00000373554 SPATA31A7Q8IWB4 1347 aa16.62■□□□□ 0.25
HDAC8-201ENST00000373554 COL18A1P39060 1754 aa16.6■□□□□ 0.25
HDAC8-201ENST00000373554 A0A0G2JS52 829 aa16.6■□□□□ 0.25
HDAC8-201ENST00000373554 MYT1Q01538 1121 aa16.6■□□□□ 0.25
HDAC8-201ENST00000373554 CARD14Q9BXL6 1004 aa16.6■□□□□ 0.25
HDAC8-201ENST00000373554 LTN1O94822 1766 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms