RNA–Protein interactions for RNA: ENST00000373377.1

CSMD2-203, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-203ENST00000373377 NSD3Q9BZ95 1437 aa12.33□□□□□ -0.43
CSMD2-203ENST00000373377 NPM1P06748 294 aaKnown RBP eCLIP12.33□□□□□ -0.44
CSMD2-203ENST00000373377 HSP90AB1P08238 724 aaKnown RBP12.33□□□□□ -0.44
CSMD2-203ENST00000373377 MVPQ14764 893 aaKnown RBP12.33□□□□□ -0.44
CSMD2-203ENST00000373377 TSPOAP1O95153 1857 aa12.33□□□□□ -0.44
CSMD2-203ENST00000373377 CHMP5Q9NZZ3 219 aa12.33□□□□□ -0.44
CSMD2-203ENST00000373377 MYH16Q9H6N6 1097 aa12.32□□□□□ -0.44
CSMD2-203ENST00000373377 TRIM44Q96DX7 344 aaPredicted RBP12.32□□□□□ -0.44
CSMD2-203ENST00000373377 STK26Q9P289 416 aa12.32□□□□□ -0.44
CSMD2-203ENST00000373377 CLTCQ00610 1675 aaKnown RBP12.31□□□□□ -0.44
CSMD2-203ENST00000373377 ELL2O00472 640 aaPredicted RBP12.31□□□□□ -0.44
CSMD2-203ENST00000373377 C1orf115Q9H7X2 142 aa12.31□□□□□ -0.44
CSMD2-203ENST00000373377 ARHGEF40Q8TER5 1519 aa12.31□□□□□ -0.44
CSMD2-203ENST00000373377 NOB1Q9ULX3 412 aaKnown RBP12.3□□□□□ -0.44
CSMD2-203ENST00000373377 TRIM27P14373 513 aa12.3□□□□□ -0.44
CSMD2-203ENST00000373377 NPC1L1Q9UHC9 1359 aa12.3□□□□□ -0.44
CSMD2-203ENST00000373377 VSIG10Q8N0Z9 540 aa12.3□□□□□ -0.44
CSMD2-203ENST00000373377 SSH1Q8WYL5 1049 aa12.3□□□□□ -0.44
CSMD2-203ENST00000373377 GGNBP2Q9H3C7 697 aa12.3□□□□□ -0.44
CSMD2-203ENST00000373377 CABP2Q9NPB3 220 aa12.3□□□□□ -0.44
CSMD2-203ENST00000373377 ZFYVE9O95405 1425 aa12.29□□□□□ -0.44
CSMD2-203ENST00000373377 NCLP19338 710 aaKnown RBP12.29□□□□□ -0.44
CSMD2-203ENST00000373377 GGT6Q6P531 493 aa12.29□□□□□ -0.44
CSMD2-203ENST00000373377 SHPRHQ149N8 1683 aa12.29□□□□□ -0.44
CSMD2-203ENST00000373377 TMEM57Q8N5G2 664 aa12.28□□□□□ -0.44
CSMD2-203ENST00000373377 GRPEL1Q9HAV7 217 aa12.28□□□□□ -0.44
CSMD2-203ENST00000373377 SPATA31D1Q6ZQQ2 1576 aa12.28□□□□□ -0.44
CSMD2-203ENST00000373377 RAPGEF3O95398 923 aa12.28□□□□□ -0.44
CSMD2-203ENST00000373377 ANKRD45Q5TZF3 282 aa12.27□□□□□ -0.44
CSMD2-203ENST00000373377 TULP4Q9NRJ4 1543 aa12.27□□□□□ -0.45
CSMD2-203ENST00000373377 NLRP1Q9C000 1473 aa12.27□□□□□ -0.45
CSMD2-203ENST00000373377 WDR63Q8IWG1 891 aa12.27□□□□□ -0.45
CSMD2-203ENST00000373377 RBM42Q9BTD8 480 aaKnown RBP12.27□□□□□ -0.45
CSMD2-203ENST00000373377 HSP90AA2PQ14568 343 aaPredicted RBP12.26□□□□□ -0.45
CSMD2-203ENST00000373377 FBLN1P23142 703 aa12.26□□□□□ -0.45
CSMD2-203ENST00000373377 SRPK2P78362 688 aaKnown RBP12.26□□□□□ -0.45
CSMD2-203ENST00000373377 ZBTB7CA1YPR0 619 aa12.26□□□□□ -0.45
CSMD2-203ENST00000373377 APBB1O00213 710 aa12.26□□□□□ -0.45
CSMD2-203ENST00000373377 MRE11P49959 708 aa12.26□□□□□ -0.45
CSMD2-203ENST00000373377 TNPO1Q92973 898 aaKnown RBP12.26□□□□□ -0.45
CSMD2-203ENST00000373377 NINLQ9Y2I6 1382 aa12.26□□□□□ -0.45
CSMD2-203ENST00000373377 RIPK4P57078 832 aa12.25□□□□□ -0.45
CSMD2-203ENST00000373377 NGEFQ8N5V2 710 aa12.25□□□□□ -0.45
CSMD2-203ENST00000373377 ARID3AQ99856 593 aa12.25□□□□□ -0.45
CSMD2-203ENST00000373377 POLR3AO14802 1390 aaPredicted RBP12.25□□□□□ -0.45
CSMD2-203ENST00000373377 DDX19BQ9UMR2 479 aa12.25□□□□□ -0.45
CSMD2-203ENST00000373377 ATF7IPQ6VMQ6 1270 aa12.24□□□□□ -0.45
CSMD2-203ENST00000373377 ANKRD26Q9UPS8 1709 aa12.24□□□□□ -0.45
CSMD2-203ENST00000373377 RPGRIP1LQ68CZ1 1315 aa12.24□□□□□ -0.45
CSMD2-203ENST00000373377 NRXN3Q9Y4C0 1643 aa12.24□□□□□ -0.45
CSMD2-203ENST00000373377 DDX11L8A8MPP1 907 aa12.24□□□□□ -0.45
CSMD2-203ENST00000373377 ESPNB1AK53 854 aa12.24□□□□□ -0.45
CSMD2-203ENST00000373377 GAS2L3Q86XJ1 694 aa12.24□□□□□ -0.45
CSMD2-203ENST00000373377 THUMPD2Q9BTF0 503 aaKnown RBP12.24□□□□□ -0.45
CSMD2-203ENST00000373377 FSD2A1L4K1 749 aa12.23□□□□□ -0.45
CSMD2-203ENST00000373377 GLIPR1L2Q4G1C9 344 aa12.23□□□□□ -0.45
CSMD2-203ENST00000373377 ERBB4Q15303 1308 aa12.23□□□□□ -0.45
CSMD2-203ENST00000373377 CD2BP2O95400 341 aaKnown RBP12.22□□□□□ -0.45
CSMD2-203ENST00000373377 C14orf93Q9H972 538 aaKnown RBP12.22□□□□□ -0.45
CSMD2-203ENST00000373377 TMPOP42166 694 aaKnown RBP12.22□□□□□ -0.45
CSMD2-203ENST00000373377 TPRNQ4KMQ1 711 aa12.22□□□□□ -0.45
CSMD2-203ENST00000373377 PTPRMP28827 1452 aa12.22□□□□□ -0.45
CSMD2-203ENST00000373377 CLCN1P35523 988 aa12.22□□□□□ -0.45
CSMD2-203ENST00000373377 FOXD4L5Q5VV16 416 aaPredicted RBP12.22□□□□□ -0.45
CSMD2-203ENST00000373377 FOXD4L4Q8WXT5 416 aaPredicted RBP12.22□□□□□ -0.45
CSMD2-203ENST00000373377 GBP4Q96PP9 640 aa12.22□□□□□ -0.45
CSMD2-203ENST00000373377 SSFA2P28290 1259 aa12.2□□□□□ -0.46
CSMD2-203ENST00000373377 SLC24A1O60721 1099 aa12.2□□□□□ -0.46
CSMD2-203ENST00000373377 HMOX1P09601 288 aa12.2□□□□□ -0.46
CSMD2-203ENST00000373377 KNDC1Q76NI1 1749 aa12.2□□□□□ -0.46
CSMD2-203ENST00000373377 MINK1Q8N4C8 1332 aaPredicted RBP12.2□□□□□ -0.46
CSMD2-203ENST00000373377 CHD1LQ86WJ1 897 aa12.2□□□□□ -0.46
CSMD2-203ENST00000373377 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.2□□□□□ -0.46
CSMD2-203ENST00000373377 DDX49Q9Y6V7 483 aaKnown RBP12.2□□□□□ -0.46
CSMD2-203ENST00000373377 ANP32BQ92688 251 aaKnown RBP12.19□□□□□ -0.46
CSMD2-203ENST00000373377 ALKQ9UM73 1620 aa12.19□□□□□ -0.46
CSMD2-203ENST00000373377 AAMPQ13685 434 aa12.18□□□□□ -0.46
CSMD2-203ENST00000373377 TRIM35Q9UPQ4 493 aa12.18□□□□□ -0.46
CSMD2-203ENST00000373377 IPO8O15397 1037 aaKnown RBP12.18□□□□□ -0.46
CSMD2-203ENST00000373377 HDAC1Q13547 482 aaPredicted RBP12.17□□□□□ -0.46
CSMD2-203ENST00000373377 CYB5RLQ6IPT4 315 aa12.17□□□□□ -0.46
CSMD2-203ENST00000373377 MCTP1Q6DN14 999 aa12.17□□□□□ -0.46
CSMD2-203ENST00000373377 ZBTB40Q9NUA8 1239 aa12.17□□□□□ -0.46
CSMD2-203ENST00000373377 EVC2Q86UK5 1308 aa12.17□□□□□ -0.46
CSMD2-203ENST00000373377 GOLGA6L22H0YM25 854 aa12.16□□□□□ -0.46
CSMD2-203ENST00000373377 ZNF692Q9BU19 519 aaPredicted RBP12.16□□□□□ -0.46
CSMD2-203ENST00000373377 RBM10P98175 930 aaKnown RBP12.16□□□□□ -0.46
CSMD2-203ENST00000373377 SMC5Q8IY18 1101 aa12.16□□□□□ -0.46
CSMD2-203ENST00000373377 GAS2L2Q8NHY3 880 aa12.16□□□□□ -0.46
CSMD2-203ENST00000373377 PHF23Q9BUL5 403 aaPredicted RBP12.16□□□□□ -0.46
CSMD2-203ENST00000373377 DLC1Q96QB1 1528 aa12.16□□□□□ -0.46
CSMD2-203ENST00000373377 NASPP49321 788 aaPredicted RBP12.16□□□□□ -0.46
CSMD2-203ENST00000373377 TBC1D9Q6ZT07 1266 aa12.16□□□□□ -0.46
CSMD2-203ENST00000373377 NUCB1Q02818 461 aa12.15□□□□□ -0.46
CSMD2-203ENST00000373377 FOXD4L6Q3SYB3 417 aaPredicted RBP12.15□□□□□ -0.46
CSMD2-203ENST00000373377 FOXD4L3Q6VB84 417 aaPredicted RBP12.15□□□□□ -0.46
CSMD2-203ENST00000373377 CHAMP1Q96JM3 812 aa12.15□□□□□ -0.46
CSMD2-203ENST00000373377 PKNOX2Q96KN3 472 aa12.15□□□□□ -0.46
CSMD2-203ENST00000373377 A2ML1A8K2U0 1454 aa12.15□□□□□ -0.46
CSMD2-203ENST00000373377 UBR1Q8IWV7 1749 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms