RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 PDE3AQ14432 1141 aa13.12□□□□□ -0.31
PGK1-201ENST00000373316 LRRFIP1Q32MZ4 808 aaKnown RBP13.12□□□□□ -0.31
PGK1-201ENST00000373316 COG3Q96JB2 828 aa13.12□□□□□ -0.31
PGK1-201ENST00000373316 RIMS2Q9UQ26 1411 aa13.11□□□□□ -0.31
PGK1-201ENST00000373316 PNISRQ8TF01 805 aaKnown RBP13.11□□□□□ -0.31
PGK1-201ENST00000373316 PPLO60437 1756 aa13.11□□□□□ -0.31
PGK1-201ENST00000373316 REC8O95072 547 aa13.11□□□□□ -0.31
PGK1-201ENST00000373316 ZNF428Q96B54 188 aa13.11□□□□□ -0.31
PGK1-201ENST00000373316 ARXQ96QS3 562 aa13.11□□□□□ -0.31
PGK1-201ENST00000373316 ZBTB7CA1YPR0 619 aa13.11□□□□□ -0.31
PGK1-201ENST00000373316 SOX12O15370 315 aa13.11□□□□□ -0.31
PGK1-201ENST00000373316 TNRQ92752 1358 aa13.11□□□□□ -0.31
PGK1-201ENST00000373316 GNAI1P63096 354 aa13.11□□□□□ -0.31
PGK1-201ENST00000373316 IL27Q8NEV9 243 aa13.1□□□□□ -0.31
PGK1-201ENST00000373316 A2ML1A8K2U0 1454 aa13.1□□□□□ -0.31
PGK1-201ENST00000373316 MYOM2P54296 1465 aa13.1□□□□□ -0.31
PGK1-201ENST00000373316 AMER1Q5JTC6 1135 aaPredicted RBP13.1□□□□□ -0.31
PGK1-201ENST00000373316 RSPH6AQ9H0K4 717 aa13.1□□□□□ -0.31
PGK1-201ENST00000373316 GGNBP2Q9H3C7 697 aa13.1□□□□□ -0.31
PGK1-201ENST00000373316 ISY1Q9ULR0 285 aaKnown RBP13.1□□□□□ -0.31
PGK1-201ENST00000373316 TMEM131LA2VDJ0 1609 aa13.1□□□□□ -0.31
PGK1-201ENST00000373316 ARHGAP31Q2M1Z3 1444 aa13.1□□□□□ -0.31
PGK1-201ENST00000373316 DIAPH1O60610 1272 aaKnown RBP13.1□□□□□ -0.31
PGK1-201ENST00000373316 IQGAP1P46940 1657 aa13.1□□□□□ -0.31
PGK1-201ENST00000373316 CABP1Q9NZU7 370 aa13.09□□□□□ -0.31
PGK1-201ENST00000373316 POLR1AO95602 1720 aaPredicted RBP13.09□□□□□ -0.31
PGK1-201ENST00000373316 IFT172Q9UG01 1749 aa13.09□□□□□ -0.31
PGK1-201ENST00000373316 HSP90AB4PQ58FF6 505 aa13.08□□□□□ -0.31
PGK1-201ENST00000373316 CDK19Q9BWU1 502 aa13.08□□□□□ -0.31
PGK1-201ENST00000373316 ADGRB1O14514 1584 aa13.08□□□□□ -0.32
PGK1-201ENST00000373316 DZIP1LQ8IYY4 767 aaKnown RBP13.08□□□□□ -0.32
PGK1-201ENST00000373316 RUFY2Q8WXA3 655 aa13.08□□□□□ -0.32
PGK1-201ENST00000373316 ASXL1Q8IXJ9 1541 aa13.08□□□□□ -0.32
PGK1-201ENST00000373316 PPP2R1AP30153 589 aa13.08□□□□□ -0.32
PGK1-201ENST00000373316 CDCA7LQ96GN5 454 aa13.08□□□□□ -0.32
PGK1-201ENST00000373316 CRBNQ96SW2 442 aa13.08□□□□□ -0.32
PGK1-201ENST00000373316 CHMP5Q9NZZ3 219 aa13.08□□□□□ -0.32
PGK1-201ENST00000373316 ZRANB1Q9UGI0 708 aa13.08□□□□□ -0.32
PGK1-201ENST00000373316 ADAMTS8Q9UP79 889 aa13.07□□□□□ -0.32
PGK1-201ENST00000373316 GSE1Q14687 1217 aa13.07□□□□□ -0.32
PGK1-201ENST00000373316 NRXN1Q9ULB1 1477 aa13.07□□□□□ -0.32
PGK1-201ENST00000373316 EXOC6Q8TAG9 804 aa13.06□□□□□ -0.32
PGK1-201ENST00000373316 MFAP1P55081 439 aaKnown RBP13.06□□□□□ -0.32
PGK1-201ENST00000373316 WDR63Q8IWG1 891 aa13.06□□□□□ -0.32
PGK1-201ENST00000373316 NSD3Q9BZ95 1437 aa13.06□□□□□ -0.32
PGK1-201ENST00000373316 YTHDC2Q9H6S0 1430 aaKnown RBP13.06□□□□□ -0.32
PGK1-201ENST00000373316 NUCB2P80303 420 aa13.05□□□□□ -0.32
PGK1-201ENST00000373316 PTPRMP28827 1452 aa13.05□□□□□ -0.32
PGK1-201ENST00000373316 RRP7AQ9Y3A4 280 aaKnown RBP13.04□□□□□ -0.32
PGK1-201ENST00000373316 AGLP35573 1532 aa13.04□□□□□ -0.32
PGK1-201ENST00000373316 CLUAP1Q96AJ1 413 aa13.04□□□□□ -0.32
PGK1-201ENST00000373316 PARD3Q8TEW0 1356 aa13.04□□□□□ -0.32
PGK1-201ENST00000373316 ZC3H13Q5T200 1668 aaKnown RBP13.03□□□□□ -0.32
PGK1-201ENST00000373316 AMPHP49418 695 aa13.03□□□□□ -0.32
PGK1-201ENST00000373316 ALKQ9UM73 1620 aa13.02□□□□□ -0.32
PGK1-201ENST00000373316 ATAD2Q6PL18 1390 aa13.02□□□□□ -0.32
PGK1-201ENST00000373316 PDIA4P13667 645 aaKnown RBP13.02□□□□□ -0.32
PGK1-201ENST00000373316 QRICH2Q9H0J4 1663 aa13.02□□□□□ -0.32
PGK1-201ENST00000373316 MCM2P49736 904 aa13.02□□□□□ -0.33
PGK1-201ENST00000373316 INTS3Q68E01 1043 aaKnown RBP13.02□□□□□ -0.33
PGK1-201ENST00000373316 APAF1O14727 1248 aa13.01□□□□□ -0.33
PGK1-201ENST00000373316 TULP4Q9NRJ4 1543 aa13.01□□□□□ -0.33
PGK1-201ENST00000373316 NGDNQ8NEJ9 315 aaKnown RBP13.01□□□□□ -0.33
PGK1-201ENST00000373316 NSD2O96028 1365 aa13.01□□□□□ -0.33
PGK1-201ENST00000373316 HSPA2P54652 639 aa13.01□□□□□ -0.33
PGK1-201ENST00000373316 NUTM2GQ5VZR2 741 aa13.01□□□□□ -0.33
PGK1-201ENST00000373316 TMEM2Q9UHN6 1383 aa13.01□□□□□ -0.33
PGK1-201ENST00000373316 GCC1Q96CN9 775 aa13□□□□□ -0.33
PGK1-201ENST00000373316 SPATA31D1Q6ZQQ2 1576 aa13□□□□□ -0.33
PGK1-201ENST00000373316 DRC7Q8IY82 874 aa13□□□□□ -0.33
PGK1-201ENST00000373316 ABCC11Q96J66 1382 aa13□□□□□ -0.33
PGK1-201ENST00000373316 MYOM1P52179 1685 aa13□□□□□ -0.33
PGK1-201ENST00000373316 A0A1W2PP64 1363 aa12.99□□□□□ -0.33
PGK1-201ENST00000373316 LAMC1P11047 1609 aa12.99□□□□□ -0.33
PGK1-201ENST00000373316 PPP6R1Q9UPN7 881 aa12.99□□□□□ -0.33
PGK1-201ENST00000373316 ROBO2Q9HCK4 1378 aa12.99□□□□□ -0.33
PGK1-201ENST00000373316 TPM3P06753 285 aa12.99□□□□□ -0.33
PGK1-201ENST00000373316 MTHFSP49914 203 aa12.99□□□□□ -0.33
PGK1-201ENST00000373316 GNL2Q13823 731 aaKnown RBP12.99□□□□□ -0.33
PGK1-201ENST00000373316 AMOTL2Q9Y2J4 779 aa12.99□□□□□ -0.33
PGK1-201ENST00000373316 DHX8Q14562 1220 aaKnown RBP12.99□□□□□ -0.33
PGK1-201ENST00000373316 KDM5AP29375 1690 aaKnown RBP12.98□□□□□ -0.33
PGK1-201ENST00000373316 DDX58O95786 925 aaKnown RBP12.98□□□□□ -0.33
PGK1-201ENST00000373316 SLKQ9H2G2 1235 aaPredicted RBP12.98□□□□□ -0.33
PGK1-201ENST00000373316 ZFYVE9O95405 1425 aa12.98□□□□□ -0.33
PGK1-201ENST00000373316 LETM1O95202 739 aaPredicted RBP12.97□□□□□ -0.33
PGK1-201ENST00000373316 NME9Q86XW9 330 aa12.97□□□□□ -0.33
PGK1-201ENST00000373316 ARHGEF28Q8N1W1 1705 aaKnown RBP12.97□□□□□ -0.33
PGK1-201ENST00000373316 TRIM6-TRIM34B2RNG4 842 aa12.97□□□□□ -0.33
PGK1-201ENST00000373316 KCNA6P17658 529 aa12.97□□□□□ -0.33
PGK1-201ENST00000373316 RNF20Q5VTR2 975 aa12.97□□□□□ -0.33
PGK1-201ENST00000373316 ZNF692Q9BU19 519 aaPredicted RBP12.97□□□□□ -0.33
PGK1-201ENST00000373316 LMOD2Q6P5Q4 547 aa12.96□□□□□ -0.33
PGK1-201ENST00000373316 CDC45O75419 566 aa12.96□□□□□ -0.33
PGK1-201ENST00000373316 RIPK4P57078 832 aa12.96□□□□□ -0.33
PGK1-201ENST00000373316 PLCB2Q00722 1185 aa12.96□□□□□ -0.33
PGK1-201ENST00000373316 REREQ9P2R6 1566 aa12.96□□□□□ -0.33
PGK1-201ENST00000373316 PLIN1O60240 522 aa12.96□□□□□ -0.33
PGK1-201ENST00000373316 DMRT2Q9Y5R5 561 aa12.96□□□□□ -0.33
PGK1-201ENST00000373316 C3P01024 1663 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms