RNA–Protein interactions for RNA: ENST00000373104.5

CSF3R-204, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF3R, Length 2,953 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-204ENST00000373104 DUOX2Q9NRD8 1548 aa15.49■□□□□ 0.07
CSF3R-204ENST00000373104 TMEM132EQ6IEE7 984 aa15.49■□□□□ 0.07
CSF3R-204ENST00000373104 TMPOP42166 694 aaKnown RBP15.48■□□□□ 0.07
CSF3R-204ENST00000373104 CT47B1P0C2W7 299 aaPredicted RBP15.48■□□□□ 0.07
CSF3R-204ENST00000373104 ZSCAN23Q3MJ62 389 aa15.48■□□□□ 0.07
CSF3R-204ENST00000373104 RBSNQ9H1K0 784 aa15.48■□□□□ 0.07
CSF3R-204ENST00000373104 PRIM1P49642 420 aaKnown RBP15.48■□□□□ 0.07
CSF3R-204ENST00000373104 PKP1Q13835 747 aa15.48■□□□□ 0.07
CSF3R-204ENST00000373104 IQSEC2Q5JU85 1478 aa15.47■□□□□ 0.07
CSF3R-204ENST00000373104 SPAG9O60271 1321 aaKnown RBP15.47■□□□□ 0.07
CSF3R-204ENST00000373104 KIF3BO15066 747 aa15.47■□□□□ 0.07
CSF3R-204ENST00000373104 PREX2Q70Z35 1606 aa15.47■□□□□ 0.07
CSF3R-204ENST00000373104 PRPF40AO75400 957 aaKnown RBP15.47■□□□□ 0.07
CSF3R-204ENST00000373104 EFCAB2Q5VUJ9 269 aa15.47■□□□□ 0.07
CSF3R-204ENST00000373104 RBM27Q9P2N5 1060 aaKnown RBP15.47■□□□□ 0.07
CSF3R-204ENST00000373104 ERCC6Q03468 1493 aa15.47■□□□□ 0.07
CSF3R-204ENST00000373104 SAFB2Q14151 953 aaKnown RBP eCLIP15.46■□□□□ 0.07
CSF3R-204ENST00000373104 FOXD4L5Q5VV16 416 aaPredicted RBP15.46■□□□□ 0.07
CSF3R-204ENST00000373104 FOXD4L4Q8WXT5 416 aaPredicted RBP15.46■□□□□ 0.07
CSF3R-204ENST00000373104 TTC37Q6PGP7 1564 aa15.46■□□□□ 0.07
CSF3R-204ENST00000373104 KANK1Q14678 1352 aa15.46■□□□□ 0.07
CSF3R-204ENST00000373104 PTPRTO14522 1441 aa15.46■□□□□ 0.06
CSF3R-204ENST00000373104 TRIM35Q9UPQ4 493 aa15.45■□□□□ 0.06
CSF3R-204ENST00000373104 KIF16BQ96L93 1317 aa15.45■□□□□ 0.06
CSF3R-204ENST00000373104 ELL2O00472 640 aaPredicted RBP15.45■□□□□ 0.06
CSF3R-204ENST00000373104 CHAMP1Q96JM3 812 aa15.45■□□□□ 0.06
CSF3R-204ENST00000373104 NOL7Q9UMY1 257 aaKnown RBP15.45■□□□□ 0.06
CSF3R-204ENST00000373104 RNF214Q8ND24 703 aa15.45■□□□□ 0.06
CSF3R-204ENST00000373104 CEP152O94986 1710 aa15.44■□□□□ 0.06
CSF3R-204ENST00000373104 PRDM10Q9NQV6 1147 aa15.44■□□□□ 0.06
CSF3R-204ENST00000373104 AK9Q5TCS8 1911 aa15.43■□□□□ 0.06
CSF3R-204ENST00000373104 ZNF518AQ6AHZ1 1483 aa15.43■□□□□ 0.06
CSF3R-204ENST00000373104 GGNBP2Q9H3C7 697 aa15.43■□□□□ 0.06
CSF3R-204ENST00000373104 ZNF445P59923 1031 aa15.43■□□□□ 0.06
CSF3R-204ENST00000373104 LMBRD1Q9NUN5 540 aa15.43■□□□□ 0.06
CSF3R-204ENST00000373104 NUCB2P80303 420 aa15.42■□□□□ 0.06
CSF3R-204ENST00000373104 MAP7D2Q96T17 732 aa15.42■□□□□ 0.06
CSF3R-204ENST00000373104 TRAPPC8Q9Y2L5 1435 aa15.42■□□□□ 0.06
CSF3R-204ENST00000373104 SYCE3A1L190 88 aa15.42■□□□□ 0.06
CSF3R-204ENST00000373104 CDC45O75419 566 aa15.42■□□□□ 0.06
CSF3R-204ENST00000373104 PTMAP06454 111 aaKnown RBP15.42■□□□□ 0.06
CSF3R-204ENST00000373104 NUTM2DQ5VT03 806 aaPredicted RBP15.42■□□□□ 0.06
CSF3R-204ENST00000373104 MPNDQ8N594 471 aa15.42■□□□□ 0.06
CSF3R-204ENST00000373104 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.42■□□□□ 0.06
CSF3R-204ENST00000373104 DNTTIP2Q5QJE6 756 aaKnown RBP15.41■□□□□ 0.06
CSF3R-204ENST00000373104 GCC1Q96CN9 775 aa15.41■□□□□ 0.06
CSF3R-204ENST00000373104 SHPRHQ149N8 1683 aa15.41■□□□□ 0.06
CSF3R-204ENST00000373104 ZGPATQ8N5A5 531 aaKnown RBP15.41■□□□□ 0.06
CSF3R-204ENST00000373104 CABP2Q9NPB3 220 aa15.41■□□□□ 0.06
CSF3R-204ENST00000373104 PRDM4Q9UKN5 801 aa15.41■□□□□ 0.06
CSF3R-204ENST00000373104 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.4■□□□□ 0.06
CSF3R-204ENST00000373104 IBTKQ9P2D0 1353 aaPredicted RBP15.4■□□□□ 0.06
CSF3R-204ENST00000373104 TERF1P54274 439 aa15.4■□□□□ 0.06
CSF3R-204ENST00000373104 ZKSCAN5Q9Y2L8 839 aa15.4■□□□□ 0.06
CSF3R-204ENST00000373104 CLTCL1P53675 1640 aa15.4■□□□□ 0.06
CSF3R-204ENST00000373104 APBB1O00213 710 aa15.4■□□□□ 0.06
CSF3R-204ENST00000373104 ZNF500O60304 480 aaPredicted RBP15.4■□□□□ 0.06
CSF3R-204ENST00000373104 PODXL2Q9NZ53 605 aa15.4■□□□□ 0.06
CSF3R-204ENST00000373104 SPHKAPQ2M3C7 1700 aa15.4■□□□□ 0.06
CSF3R-204ENST00000373104 TRPM2O94759 1503 aa15.39■□□□□ 0.05
CSF3R-204ENST00000373104 ZBTB7BO15156 539 aaPredicted RBP15.39■□□□□ 0.05
CSF3R-204ENST00000373104 RABEP1Q15276 862 aa15.39■□□□□ 0.05
CSF3R-204ENST00000373104 HS1BP3Q53T59 392 aa15.39■□□□□ 0.05
CSF3R-204ENST00000373104 CLEC17AQ6ZS10 378 aa15.39■□□□□ 0.05
CSF3R-204ENST00000373104 PLEKHF1Q96S99 279 aa15.39■□□□□ 0.05
CSF3R-204ENST00000373104 GPT2Q8TD30 523 aa15.39■□□□□ 0.05
CSF3R-204ENST00000373104 CD109Q6YHK3 1445 aa15.38■□□□□ 0.05
CSF3R-204ENST00000373104 UGGT1Q9NYU2 1555 aa15.38■□□□□ 0.05
CSF3R-204ENST00000373104 ZHX1Q9UKY1 873 aaPredicted RBP15.38■□□□□ 0.05
CSF3R-204ENST00000373104 PPIP5K1Q6PFW1 1433 aa15.38■□□□□ 0.05
CSF3R-204ENST00000373104 ABCC11Q96J66 1382 aa15.38■□□□□ 0.05
CSF3R-204ENST00000373104 GSPT1P15170 499 aaKnown RBP15.37■□□□□ 0.05
CSF3R-204ENST00000373104 TPRNQ4KMQ1 711 aa15.37■□□□□ 0.05
CSF3R-204ENST00000373104 PDLIM2Q96JY6 352 aa15.37■□□□□ 0.05
CSF3R-204ENST00000373104 THUMPD2Q9BTF0 503 aaKnown RBP15.37■□□□□ 0.05
CSF3R-204ENST00000373104 CSPP1Q1MSJ5 1256 aa15.37■□□□□ 0.05
CSF3R-204ENST00000373104 FOXD4L6Q3SYB3 417 aaPredicted RBP15.37■□□□□ 0.05
CSF3R-204ENST00000373104 FOXD4L3Q6VB84 417 aaPredicted RBP15.37■□□□□ 0.05
CSF3R-204ENST00000373104 SIRT2Q8IXJ6 389 aa15.37■□□□□ 0.05
CSF3R-204ENST00000373104 TMEM63CQ9P1W3 806 aa15.37■□□□□ 0.05
CSF3R-204ENST00000373104 NSFL1CQ9UNZ2 370 aaKnown RBP15.36■□□□□ 0.05
CSF3R-204ENST00000373104 NOS1P29475 1434 aa15.36■□□□□ 0.05
CSF3R-204ENST00000373104 C16orf71Q8IYS4 520 aaPredicted RBP15.36■□□□□ 0.05
CSF3R-204ENST00000373104 JARID2Q92833 1246 aaPredicted RBP15.36■□□□□ 0.05
CSF3R-204ENST00000373104 DYNC1I1O14576 645 aa15.35■□□□□ 0.05
CSF3R-204ENST00000373104 A0A0U1RQG5 324 aaPredicted RBP15.35■□□□□ 0.05
CSF3R-204ENST00000373104 ST18O60284 1047 aa15.35■□□□□ 0.05
CSF3R-204ENST00000373104 ALDH1L2Q3SY69 923 aa15.35■□□□□ 0.05
CSF3R-204ENST00000373104 CCDC39Q9UFE4 941 aa15.35■□□□□ 0.05
CSF3R-204ENST00000373104 SRPK2P78362 688 aaKnown RBP15.34■□□□□ 0.05
CSF3R-204ENST00000373104 TSPYL6Q8N831 410 aa15.34■□□□□ 0.05
CSF3R-204ENST00000373104 SASS6Q6UVJ0 657 aa15.34■□□□□ 0.05
CSF3R-204ENST00000373104 LRSAM1Q6UWE0 723 aa15.34■□□□□ 0.05
CSF3R-204ENST00000373104 TSC1Q92574 1164 aa15.34■□□□□ 0.05
CSF3R-204ENST00000373104 ATAD2Q6PL18 1390 aa15.34■□□□□ 0.05
CSF3R-204ENST00000373104 SBNO2Q9Y2G9 1366 aa15.34■□□□□ 0.05
CSF3R-204ENST00000373104 EVC2Q86UK5 1308 aa15.33■□□□□ 0.05
CSF3R-204ENST00000373104 NCBP3Q53F19 620 aaKnown RBP15.33■□□□□ 0.04
CSF3R-204ENST00000373104 NOL8Q76FK4 1167 aaKnown RBP15.33■□□□□ 0.04
CSF3R-204ENST00000373104 PLEKHM2Q8IWE5 1019 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms