RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 FCHSD2O94868 740 aa13.77□□□□□ -0.21
LCN2-202ENST00000372998 ATP7BP35670 1465 aa13.77□□□□□ -0.21
LCN2-202ENST00000372998 TMEM132EQ6IEE7 984 aa13.77□□□□□ -0.21
LCN2-202ENST00000372998 PPIP5K1Q6PFW1 1433 aa13.77□□□□□ -0.21
LCN2-202ENST00000372998 SMC4Q9NTJ3 1288 aa13.77□□□□□ -0.21
LCN2-202ENST00000372998 PTPRMP28827 1452 aa13.76□□□□□ -0.21
LCN2-202ENST00000372998 A0A1W2PP64 1363 aa13.76□□□□□ -0.21
LCN2-202ENST00000372998 PNPLA6Q8IY17 1366 aa13.76□□□□□ -0.21
LCN2-202ENST00000372998 DIAPH1O60610 1272 aaKnown RBP13.76□□□□□ -0.21
LCN2-202ENST00000372998 TNNT2P45379 298 aaPredicted RBP13.76□□□□□ -0.21
LCN2-202ENST00000372998 HAP1P54257 671 aaPredicted RBP13.76□□□□□ -0.21
LCN2-202ENST00000372998 SRPK2P78362 688 aaKnown RBP13.76□□□□□ -0.21
LCN2-202ENST00000372998 ATF7IPQ6VMQ6 1270 aa13.76□□□□□ -0.21
LCN2-202ENST00000372998 SKAP1Q86WV1 359 aa13.76□□□□□ -0.21
LCN2-202ENST00000372998 OSCARQ8IYS5 282 aa13.76□□□□□ -0.21
LCN2-202ENST00000372998 PLEKHF1Q96S99 279 aa13.76□□□□□ -0.21
LCN2-202ENST00000372998 PCDHB15Q9Y5E8 787 aa13.76□□□□□ -0.21
LCN2-202ENST00000372998 YTHDC2Q9H6S0 1430 aaKnown RBP13.75□□□□□ -0.21
LCN2-202ENST00000372998 LMOD3Q0VAK6 560 aa13.75□□□□□ -0.21
LCN2-202ENST00000372998 ARHGAP45Q92619 1136 aa13.75□□□□□ -0.21
LCN2-202ENST00000372998 ISY1Q9ULR0 285 aaKnown RBP13.75□□□□□ -0.21
LCN2-202ENST00000372998 RRP7AQ9Y3A4 280 aaKnown RBP13.75□□□□□ -0.21
LCN2-202ENST00000372998 SLC4A3P48751 1232 aa13.74□□□□□ -0.21
LCN2-202ENST00000372998 SMC5Q8IY18 1101 aa13.74□□□□□ -0.21
LCN2-202ENST00000372998 POGKQ9P215 609 aa13.74□□□□□ -0.21
LCN2-202ENST00000372998 MYO5BQ9ULV0 1848 aa13.74□□□□□ -0.21
LCN2-202ENST00000372998 FRAT2O75474 233 aaPredicted RBP13.73□□□□□ -0.21
LCN2-202ENST00000372998 CHMP5Q9NZZ3 219 aa13.73□□□□□ -0.21
LCN2-202ENST00000372998 ALKQ9UM73 1620 aa13.72□□□□□ -0.21
LCN2-202ENST00000372998 U2SURPO15042 1029 aaKnown RBP13.72□□□□□ -0.21
LCN2-202ENST00000372998 RLBP1P12271 317 aa13.72□□□□□ -0.21
LCN2-202ENST00000372998 GCC1Q96CN9 775 aa13.72□□□□□ -0.21
LCN2-202ENST00000372998 CABP2Q9NPB3 220 aa13.72□□□□□ -0.21
LCN2-202ENST00000372998 KIF24Q5T7B8 1368 aa13.71□□□□□ -0.21
LCN2-202ENST00000372998 AGLP35573 1532 aa13.71□□□□□ -0.21
LCN2-202ENST00000372998 EXOSC9Q06265 439 aaKnown RBP13.71□□□□□ -0.21
LCN2-202ENST00000372998 IDI1Q13907 227 aa13.71□□□□□ -0.21
LCN2-202ENST00000372998 FAM43AQ8N2R8 423 aa13.71□□□□□ -0.21
LCN2-202ENST00000372998 C22orf23Q9BZE7 217 aa13.71□□□□□ -0.21
LCN2-202ENST00000372998 FYB1O15117 783 aa13.7□□□□□ -0.22
LCN2-202ENST00000372998 RIPK4P57078 832 aa13.7□□□□□ -0.22
LCN2-202ENST00000372998 ITPRIPQ8IWB1 547 aa13.7□□□□□ -0.22
LCN2-202ENST00000372998 HSCBQ8IWL3 235 aa13.7□□□□□ -0.22
LCN2-202ENST00000372998 CIZ1Q9ULV3 898 aaPredicted RBP13.7□□□□□ -0.22
LCN2-202ENST00000372998 TRIM35Q9UPQ4 493 aa13.7□□□□□ -0.22
LCN2-202ENST00000372998 ARHGEF40Q8TER5 1519 aa13.69□□□□□ -0.22
LCN2-202ENST00000372998 DDX11L8A8MPP1 907 aa13.69□□□□□ -0.22
LCN2-202ENST00000372998 TRIM27P14373 513 aa13.69□□□□□ -0.22
LCN2-202ENST00000372998 GNAI1P63096 354 aa13.69□□□□□ -0.22
LCN2-202ENST00000372998 SSH1Q8WYL5 1049 aa13.69□□□□□ -0.22
LCN2-202ENST00000372998 SNX21Q969T3 373 aa13.69□□□□□ -0.22
LCN2-202ENST00000372998 ANTXR1Q9H6X2 564 aa13.69□□□□□ -0.22
LCN2-202ENST00000372998 FAM135BQ49AJ0 1406 aa13.69□□□□□ -0.22
LCN2-202ENST00000372998 CD163L1Q9NR16 1453 aa13.68□□□□□ -0.22
LCN2-202ENST00000372998 TBC1D2Q9BYX2 928 aa13.68□□□□□ -0.22
LCN2-202ENST00000372998 ZBTB40Q9NUA8 1239 aa13.68□□□□□ -0.22
LCN2-202ENST00000372998 PIK3R4Q99570 1358 aa13.68□□□□□ -0.22
LCN2-202ENST00000372998 CDK12Q9NYV4 1490 aaPredicted RBP13.67□□□□□ -0.22
LCN2-202ENST00000372998 EDC4Q6P2E9 1401 aaKnown RBP13.67□□□□□ -0.22
LCN2-202ENST00000372998 RBM25P49756 843 aaKnown RBP13.67□□□□□ -0.22
LCN2-202ENST00000372998 HDGFP51858 240 aaKnown RBP13.67□□□□□ -0.22
LCN2-202ENST00000372998 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.67□□□□□ -0.22
LCN2-202ENST00000372998 SIRT1Q96EB6 747 aa13.67□□□□□ -0.22
LCN2-202ENST00000372998 AATKQ6ZMQ8 1374 aa13.67□□□□□ -0.22
LCN2-202ENST00000372998 KNDC1Q76NI1 1749 aa13.67□□□□□ -0.22
LCN2-202ENST00000372998 PTCH1Q13635 1447 aa13.66□□□□□ -0.22
LCN2-202ENST00000372998 SEC24BO95487 1268 aa13.66□□□□□ -0.22
LCN2-202ENST00000372998 NUCB1Q02818 461 aa13.66□□□□□ -0.22
LCN2-202ENST00000372998 NFE2L2Q16236 605 aa13.66□□□□□ -0.22
LCN2-202ENST00000372998 PRAM1Q96QH2 718 aa13.66□□□□□ -0.22
LCN2-202ENST00000372998 BCL2L13Q9BXK5 485 aa13.66□□□□□ -0.22
LCN2-202ENST00000372998 GGNBP2Q9H3C7 697 aa13.66□□□□□ -0.22
LCN2-202ENST00000372998 IFT57Q9NWB7 429 aa13.66□□□□□ -0.22
LCN2-202ENST00000372998 NOB1Q9ULX3 412 aaKnown RBP13.66□□□□□ -0.22
LCN2-202ENST00000372998 LRRC7Q96NW7 1537 aa13.65□□□□□ -0.22
LCN2-202ENST00000372998 MAP2P11137 1827 aaKnown RBP13.65□□□□□ -0.22
LCN2-202ENST00000372998 SKOR2Q2VWA4 1001 aaPredicted RBP13.65□□□□□ -0.22
LCN2-202ENST00000372998 BMP2KLQ5H9B9 411 aa13.65□□□□□ -0.22
LCN2-202ENST00000372998 IL27Q8NEV9 243 aa13.65□□□□□ -0.22
LCN2-202ENST00000372998 CDK19Q9BWU1 502 aa13.65□□□□□ -0.22
LCN2-202ENST00000372998 API5Q9BZZ5 524 aaKnown RBP13.65□□□□□ -0.22
LCN2-202ENST00000372998 STAG3Q9UJ98 1225 aa13.65□□□□□ -0.22
LCN2-202ENST00000372998 SPATA31D1Q6ZQQ2 1576 aa13.64□□□□□ -0.23
LCN2-202ENST00000372998 MCM4P33991 863 aa13.64□□□□□ -0.23
LCN2-202ENST00000372998 MINK1Q8N4C8 1332 aaPredicted RBP13.64□□□□□ -0.23
LCN2-202ENST00000372998 CHD1LQ86WJ1 897 aa13.63□□□□□ -0.23
LCN2-202ENST00000372998 TMEM57Q8N5G2 664 aa13.63□□□□□ -0.23
LCN2-202ENST00000372998 TSR2Q969E8 191 aaKnown RBP13.63□□□□□ -0.23
LCN2-202ENST00000372998 GBP4Q96PP9 640 aa13.63□□□□□ -0.23
LCN2-202ENST00000372998 STK26Q9P289 416 aa13.63□□□□□ -0.23
LCN2-202ENST00000372998 SETD1AO15047 1707 aaKnown RBP13.62□□□□□ -0.23
LCN2-202ENST00000372998 ITSN1Q15811 1721 aa13.62□□□□□ -0.23
LCN2-202ENST00000372998 MON2Q7Z3U7 1717 aa13.62□□□□□ -0.23
LCN2-202ENST00000372998 GOLGA6L3A6NEY3 463 aa13.62□□□□□ -0.23
LCN2-202ENST00000372998 RSPH6AQ9H0K4 717 aa13.62□□□□□ -0.23
LCN2-202ENST00000372998 SLKQ9H2G2 1235 aaPredicted RBP13.62□□□□□ -0.23
LCN2-202ENST00000372998 RAPGEF3O95398 923 aa13.61□□□□□ -0.23
LCN2-202ENST00000372998 MFAP1P55081 439 aaKnown RBP13.61□□□□□ -0.23
LCN2-202ENST00000372998 ZNF692Q9BU19 519 aaPredicted RBP13.61□□□□□ -0.23
LCN2-202ENST00000372998 NCOA3Q9Y6Q9 1424 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms