RNA–Protein interactions for RNA: ENST00000372739.5

SPTAN1-203, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-203ENST00000372739 NOM1Q5C9Z4 860 aaKnown RBP11.28□□□□□ -0.6
SPTAN1-203ENST00000372739 GNL3LQ9NVN8 582 aaKnown RBP11.28□□□□□ -0.6
SPTAN1-203ENST00000372739 CCP110O43303 1012 aa11.28□□□□□ -0.6
SPTAN1-203ENST00000372739 CAGE1Q8TC20 777 aa11.27□□□□□ -0.6
SPTAN1-203ENST00000372739 SMARCE1Q969G3 411 aa11.27□□□□□ -0.6
SPTAN1-203ENST00000372739 PDILTQ8N807 584 aa11.27□□□□□ -0.61
SPTAN1-203ENST00000372739 PANK1Q8TE04 598 aa11.27□□□□□ -0.61
SPTAN1-203ENST00000372739 ERCC4Q92889 916 aaPredicted RBP11.27□□□□□ -0.61
SPTAN1-203ENST00000372739 SYNJ2O15056 1496 aa11.27□□□□□ -0.61
SPTAN1-203ENST00000372739 ZFYVE27Q5T4F4 411 aa11.27□□□□□ -0.61
SPTAN1-203ENST00000372739 MAGEC2Q9UBF1 373 aaPredicted RBP11.27□□□□□ -0.61
SPTAN1-203ENST00000372739 KINO60870 393 aaKnown RBP11.27□□□□□ -0.61
SPTAN1-203ENST00000372739 FAM43AQ8N2R8 423 aa11.27□□□□□ -0.61
SPTAN1-203ENST00000372739 ZNF396Q96N95 335 aaPredicted RBP11.27□□□□□ -0.61
SPTAN1-203ENST00000372739 FILIP1LQ4L180 1135 aa11.27□□□□□ -0.61
SPTAN1-203ENST00000372739 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.27□□□□□ -0.61
SPTAN1-203ENST00000372739 CASKIN1Q8WXD9 1431 aa11.26□□□□□ -0.61
SPTAN1-203ENST00000372739 NCOA2Q15596 1464 aa11.26□□□□□ -0.61
SPTAN1-203ENST00000372739 PIP4K2AP48426 406 aaPredicted RBP11.26□□□□□ -0.61
SPTAN1-203ENST00000372739 NUTM2GQ5VZR2 741 aa11.26□□□□□ -0.61
SPTAN1-203ENST00000372739 SURF6O75683 361 aaKnown RBP11.26□□□□□ -0.61
SPTAN1-203ENST00000372739 MTHFSP49914 203 aa11.26□□□□□ -0.61
SPTAN1-203ENST00000372739 DCTN1Q14203 1278 aa11.26□□□□□ -0.61
SPTAN1-203ENST00000372739 CCDC158Q5M9N0 1113 aa11.26□□□□□ -0.61
SPTAN1-203ENST00000372739 MBD3O95983 291 aa11.25□□□□□ -0.61
SPTAN1-203ENST00000372739 GNAI2P04899 355 aa11.25□□□□□ -0.61
SPTAN1-203ENST00000372739 TTC39AQ5SRH9 613 aa11.25□□□□□ -0.61
SPTAN1-203ENST00000372739 NASPP49321 788 aaPredicted RBP11.25□□□□□ -0.61
SPTAN1-203ENST00000372739 DNAJC2Q99543 621 aaKnown RBP11.25□□□□□ -0.61
SPTAN1-203ENST00000372739 RAD54L2Q9Y4B4 1467 aa11.25□□□□□ -0.61
SPTAN1-203ENST00000372739 GCC1Q96CN9 775 aa11.25□□□□□ -0.61
SPTAN1-203ENST00000372739 PLEKHH2Q8IVE3 1493 aa11.25□□□□□ -0.61
SPTAN1-203ENST00000372739 TMEM132AQ24JP5 1023 aa11.25□□□□□ -0.61
SPTAN1-203ENST00000372739 DHX8Q14562 1220 aaKnown RBP11.24□□□□□ -0.61
SPTAN1-203ENST00000372739 SYCP1Q15431 976 aa11.24□□□□□ -0.61
SPTAN1-203ENST00000372739 FAM13BQ9NYF5 915 aa11.24□□□□□ -0.61
SPTAN1-203ENST00000372739 ESCO1Q5FWF5 840 aa11.24□□□□□ -0.61
SPTAN1-203ENST00000372739 CNNM1Q9NRU3 951 aa11.24□□□□□ -0.61
SPTAN1-203ENST00000372739 IFT140Q96RY7 1462 aa11.24□□□□□ -0.61
SPTAN1-203ENST00000372739 TATP17735 454 aaPredicted RBP11.24□□□□□ -0.61
SPTAN1-203ENST00000372739 MRE11P49959 708 aa11.24□□□□□ -0.61
SPTAN1-203ENST00000372739 ANKRD1Q15327 319 aa11.24□□□□□ -0.61
SPTAN1-203ENST00000372739 PNISRQ8TF01 805 aaKnown RBP11.24□□□□□ -0.61
SPTAN1-203ENST00000372739 IGF1RP08069 1367 aa11.24□□□□□ -0.61
SPTAN1-203ENST00000372739 RABEP1Q15276 862 aa11.23□□□□□ -0.61
SPTAN1-203ENST00000372739 JMYQ8N9B5 988 aa11.23□□□□□ -0.61
SPTAN1-203ENST00000372739 SUPT6HQ7KZ85 1726 aaKnown RBP11.23□□□□□ -0.61
SPTAN1-203ENST00000372739 MTMR7Q9Y216 660 aa11.23□□□□□ -0.61
SPTAN1-203ENST00000372739 EHBP1L1Q8N3D4 1523 aa11.23□□□□□ -0.61
SPTAN1-203ENST00000372739 PPP1R1BQ9UD71 204 aaPredicted RBP11.23□□□□□ -0.61
SPTAN1-203ENST00000372739 HECW1Q76N89 1606 aa11.23□□□□□ -0.61
SPTAN1-203ENST00000372739 CCT4P50991 539 aaKnown RBP11.23□□□□□ -0.61
SPTAN1-203ENST00000372739 HFM1A2PYH4 1435 aa11.23□□□□□ -0.61
SPTAN1-203ENST00000372739 TMEM132EQ6IEE7 984 aa11.23□□□□□ -0.61
SPTAN1-203ENST00000372739 MTERF4Q7Z6M4 381 aaKnown RBP11.22□□□□□ -0.61
SPTAN1-203ENST00000372739 GRIN2BQ13224 1484 aa11.22□□□□□ -0.61
SPTAN1-203ENST00000372739 SMC2O95347 1197 aa11.22□□□□□ -0.61
SPTAN1-203ENST00000372739 TWISTNBQ3B726 338 aaPredicted RBP11.22□□□□□ -0.61
SPTAN1-203ENST00000372739 TRIM5Q9C035 493 aa11.22□□□□□ -0.61
SPTAN1-203ENST00000372739 ZNF644Q9H582 1327 aaPredicted RBP11.22□□□□□ -0.61
SPTAN1-203ENST00000372739 KRT18P05783 430 aaKnown RBP11.22□□□□□ -0.61
SPTAN1-203ENST00000372739 TCP11L2Q8N4U5 519 aa11.22□□□□□ -0.61
SPTAN1-203ENST00000372739 ADAMTS8Q9UP79 889 aa11.22□□□□□ -0.61
SPTAN1-203ENST00000372739 RBM42Q9BTD8 480 aaKnown RBP11.22□□□□□ -0.61
SPTAN1-203ENST00000372739 NACAP1Q9BZK3 213 aa11.22□□□□□ -0.61
SPTAN1-203ENST00000372739 TSPY26PQ9H489 355 aa11.22□□□□□ -0.61
SPTAN1-203ENST00000372739 ERICH3Q5RHP9 1530 aa11.22□□□□□ -0.61
SPTAN1-203ENST00000372739 PRKAR2BP31323 418 aa11.21□□□□□ -0.61
SPTAN1-203ENST00000372739 ZNF692Q9BU19 519 aaPredicted RBP11.21□□□□□ -0.61
SPTAN1-203ENST00000372739 CFTRP13569 1480 aa11.21□□□□□ -0.61
SPTAN1-203ENST00000372739 EFCAB5A4FU69 1503 aa11.21□□□□□ -0.61
SPTAN1-203ENST00000372739 CT47B1P0C2W7 299 aaPredicted RBP11.21□□□□□ -0.61
SPTAN1-203ENST00000372739 ZSCAN25Q6NSZ9 544 aa11.21□□□□□ -0.61
SPTAN1-203ENST00000372739 TXLNBQ8N3L3 684 aa11.21□□□□□ -0.61
SPTAN1-203ENST00000372739 AEBP1Q8IUX7 1158 aa11.21□□□□□ -0.62
SPTAN1-203ENST00000372739 LUC7LQ9NQ29 371 aaKnown RBP11.21□□□□□ -0.62
SPTAN1-203ENST00000372739 CWC15Q9P013 229 aaKnown RBP11.21□□□□□ -0.62
SPTAN1-203ENST00000372739 DACH1Q9UI36 760 aa11.21□□□□□ -0.62
SPTAN1-203ENST00000372739 TXNDC2Q86VQ3 553 aa11.21□□□□□ -0.62
SPTAN1-203ENST00000372739 NEK4P51957 841 aa11.21□□□□□ -0.62
SPTAN1-203ENST00000372739 STIM1Q13586 685 aa11.2□□□□□ -0.62
SPTAN1-203ENST00000372739 TRIM22Q8IYM9 498 aa11.2□□□□□ -0.62
SPTAN1-203ENST00000372739 CABP4P57796 275 aa11.2□□□□□ -0.62
SPTAN1-203ENST00000372739 ZNHIT6Q9NWK9 470 aaKnown RBP11.2□□□□□ -0.62
SPTAN1-203ENST00000372739 PPP2R1AP30153 589 aa11.2□□□□□ -0.62
SPTAN1-203ENST00000372739 PDE3AQ14432 1141 aa11.2□□□□□ -0.62
SPTAN1-203ENST00000372739 STK38Q15208 465 aa11.2□□□□□ -0.62
SPTAN1-203ENST00000372739 SPG7Q9UQ90 795 aa11.2□□□□□ -0.62
SPTAN1-203ENST00000372739 ERLIN2O94905 339 aa11.19□□□□□ -0.62
SPTAN1-203ENST00000372739 PAF1Q8N7H5 531 aa11.19□□□□□ -0.62
SPTAN1-203ENST00000372739 LRRCC1Q9C099 1032 aa11.19□□□□□ -0.62
SPTAN1-203ENST00000372739 CYP46A1Q9Y6A2 500 aa11.19□□□□□ -0.62
SPTAN1-203ENST00000372739 FAM177BA6PVY3 158 aa11.19□□□□□ -0.62
SPTAN1-203ENST00000372739 PROSER2Q86WR7 435 aaPredicted RBP11.19□□□□□ -0.62
SPTAN1-203ENST00000372739 PRAM1Q96QH2 718 aa11.19□□□□□ -0.62
SPTAN1-203ENST00000372739 SRCIN1Q9C0H9 1055 aa11.19□□□□□ -0.62
SPTAN1-203ENST00000372739 NFKBIBQ15653 356 aa11.19□□□□□ -0.62
SPTAN1-203ENST00000372739 HDGFL1Q5TGJ6 251 aa11.19□□□□□ -0.62
SPTAN1-203ENST00000372739 CCDC69A6NI79 296 aa11.19□□□□□ -0.62
SPTAN1-203ENST00000372739 TTLL5Q6EMB2 1281 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms