RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 NASPP49321 788 aaPredicted RBP22.93■■□□□ 1.26
MMP9-201ENST00000372330 DYNC1I1O14576 645 aa22.93■■□□□ 1.26
MMP9-201ENST00000372330 FAM69CQ0P6D2 419 aa22.93■■□□□ 1.26
MMP9-201ENST00000372330 ZNF500O60304 480 aaPredicted RBP22.92■■□□□ 1.26
MMP9-201ENST00000372330 CARD14Q9BXL6 1004 aa22.91■■□□□ 1.26
MMP9-201ENST00000372330 CANXP27824 592 aaKnown RBP22.91■■□□□ 1.26
MMP9-201ENST00000372330 PDZRN3Q9UPQ7 1066 aa22.91■■□□□ 1.26
MMP9-201ENST00000372330 TNPO1Q92973 898 aaKnown RBP22.9■■□□□ 1.26
MMP9-201ENST00000372330 COG6Q9Y2V7 657 aa22.9■■□□□ 1.26
MMP9-201ENST00000372330 RWDD1Q9H446 243 aaPredicted RBP22.9■■□□□ 1.26
MMP9-201ENST00000372330 ABCC3O15438 1527 aa22.89■■□□□ 1.26
MMP9-201ENST00000372330 CSPP1Q1MSJ5 1256 aa22.89■■□□□ 1.25
MMP9-201ENST00000372330 SNX21Q969T3 373 aa22.89■■□□□ 1.25
MMP9-201ENST00000372330 C14orf93Q9H972 538 aaKnown RBP22.89■■□□□ 1.25
MMP9-201ENST00000372330 R3HCC1Q9Y3T6 440 aaKnown RBP22.89■■□□□ 1.25
MMP9-201ENST00000372330 YEATS2Q9ULM3 1422 aa22.89■■□□□ 1.25
MMP9-201ENST00000372330 PPLO60437 1756 aa22.89■■□□□ 1.25
MMP9-201ENST00000372330 DIP2BQ9P265 1576 aa22.88■■□□□ 1.25
MMP9-201ENST00000372330 SMC5Q8IY18 1101 aa22.88■■□□□ 1.25
MMP9-201ENST00000372330 RPGRIP1LQ68CZ1 1315 aa22.88■■□□□ 1.25
MMP9-201ENST00000372330 TSPOAP1O95153 1857 aa22.87■■□□□ 1.25
MMP9-201ENST00000372330 NOL7Q9UMY1 257 aaKnown RBP22.87■■□□□ 1.25
MMP9-201ENST00000372330 RAB3GAP1Q15042 981 aa22.87■■□□□ 1.25
MMP9-201ENST00000372330 SPINK5Q9NQ38 1064 aaPredicted RBP22.87■■□□□ 1.25
MMP9-201ENST00000372330 ADGRB1O14514 1584 aa22.86■■□□□ 1.25
MMP9-201ENST00000372330 UQCRHLA0A096LP55 91 aa22.86■■□□□ 1.25
MMP9-201ENST00000372330 UQCRHP07919 91 aa22.86■■□□□ 1.25
MMP9-201ENST00000372330 PANK1Q8TE04 598 aa22.86■■□□□ 1.25
MMP9-201ENST00000372330 SIGLEC1Q9BZZ2 1709 aa22.86■■□□□ 1.25
MMP9-201ENST00000372330 TRAK1Q9UPV9 953 aa22.85■■□□□ 1.25
MMP9-201ENST00000372330 CAMSAP1Q5T5Y3 1602 aa22.85■■□□□ 1.25
MMP9-201ENST00000372330 MCM5P33992 734 aa22.84■■□□□ 1.25
MMP9-201ENST00000372330 DMTNQ08495 405 aa22.84■■□□□ 1.25
MMP9-201ENST00000372330 GOLGA6L22H0YM25 854 aa22.83■■□□□ 1.25
MMP9-201ENST00000372330 TMEM132EQ6IEE7 984 aa22.82■■□□□ 1.24
MMP9-201ENST00000372330 CCDC146Q8IYE0 955 aa22.82■■□□□ 1.24
MMP9-201ENST00000372330 PCDHB15Q9Y5E8 787 aa22.82■■□□□ 1.24
MMP9-201ENST00000372330 APAF1O14727 1248 aa22.81■■□□□ 1.24
MMP9-201ENST00000372330 MFAP1P55081 439 aaKnown RBP22.81■■□□□ 1.24
MMP9-201ENST00000372330 NUTM2DQ5VT03 806 aaPredicted RBP22.81■■□□□ 1.24
MMP9-201ENST00000372330 TNNT2P45379 298 aaPredicted RBP22.8■■□□□ 1.24
MMP9-201ENST00000372330 KLHL40Q2TBA0 621 aa22.8■■□□□ 1.24
MMP9-201ENST00000372330 CCDC94Q9BW85 323 aaPredicted RBP22.8■■□□□ 1.24
MMP9-201ENST00000372330 ZC3H13Q5T200 1668 aaKnown RBP22.8■■□□□ 1.24
MMP9-201ENST00000372330 CLEC17AQ6ZS10 378 aa22.8■■□□□ 1.24
MMP9-201ENST00000372330 QRICH2Q9H0J4 1663 aa22.8■■□□□ 1.24
MMP9-201ENST00000372330 RBM25P49756 843 aaKnown RBP22.79■■□□□ 1.24
MMP9-201ENST00000372330 POLR3AO14802 1390 aaPredicted RBP22.79■■□□□ 1.24
MMP9-201ENST00000372330 NSD3Q9BZ95 1437 aa22.78■■□□□ 1.24
MMP9-201ENST00000372330 PIK3C2BO00750 1634 aa22.77■■□□□ 1.24
MMP9-201ENST00000372330 SASS6Q6UVJ0 657 aa22.77■■□□□ 1.24
MMP9-201ENST00000372330 PDLIM2Q96JY6 352 aa22.77■■□□□ 1.24
MMP9-201ENST00000372330 ZNF445P59923 1031 aa22.76■■□□□ 1.23
MMP9-201ENST00000372330 PDE4CQ08493 712 aa22.76■■□□□ 1.23
MMP9-201ENST00000372330 SLC12A5Q9H2X9 1139 aa22.76■■□□□ 1.23
MMP9-201ENST00000372330 VGFO15240 615 aaPredicted RBP22.75■■□□□ 1.23
MMP9-201ENST00000372330 HSP90AB1P08238 724 aaKnown RBP22.75■■□□□ 1.23
MMP9-201ENST00000372330 ARHGAP31Q2M1Z3 1444 aa22.75■■□□□ 1.23
MMP9-201ENST00000372330 GTPBP4Q9BZE4 634 aaKnown RBP22.75■■□□□ 1.23
MMP9-201ENST00000372330 KIF20AO95235 890 aa22.74■■□□□ 1.23
MMP9-201ENST00000372330 ZKSCAN5Q9Y2L8 839 aa22.74■■□□□ 1.23
MMP9-201ENST00000372330 ZHX1Q9UKY1 873 aaPredicted RBP22.74■■□□□ 1.23
MMP9-201ENST00000372330 ZSCAN20P17040 1043 aaPredicted RBP22.73■■□□□ 1.23
MMP9-201ENST00000372330 SENP3Q9H4L4 574 aaPredicted RBP22.73■■□□□ 1.23
MMP9-201ENST00000372330 NEXMIFQ5QGS0 1516 aa22.73■■□□□ 1.23
MMP9-201ENST00000372330 MORC1Q86VD1 984 aa22.73■■□□□ 1.23
MMP9-201ENST00000372330 DDX49Q9Y6V7 483 aaKnown RBP22.72■■□□□ 1.23
MMP9-201ENST00000372330 RARSP54136 660 aaKnown RBP22.71■■□□□ 1.23
MMP9-201ENST00000372330 PUS7Q96PZ0 661 aaKnown RBP22.71■■□□□ 1.23
MMP9-201ENST00000372330 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.71■■□□□ 1.23
MMP9-201ENST00000372330 XPCQ01831 940 aaPredicted RBP22.7■■□□□ 1.22
MMP9-201ENST00000372330 USP32Q8NFA0 1604 aa22.69■■□□□ 1.22
MMP9-201ENST00000372330 EVC2Q86UK5 1308 aa22.69■■□□□ 1.22
MMP9-201ENST00000372330 IDI1Q13907 227 aa22.68■■□□□ 1.22
MMP9-201ENST00000372330 WWC1Q8IX03 1113 aa22.68■■□□□ 1.22
MMP9-201ENST00000372330 SLC52A1Q9NWF4 448 aa22.67■■□□□ 1.22
MMP9-201ENST00000372330 DMRT2Q9Y5R5 561 aa22.67■■□□□ 1.22
MMP9-201ENST00000372330 ARHGEF28Q8N1W1 1705 aaKnown RBP22.67■■□□□ 1.22
MMP9-201ENST00000372330 LETM1O95202 739 aaPredicted RBP22.66■■□□□ 1.22
MMP9-201ENST00000372330 PRDM10Q9NQV6 1147 aa22.66■■□□□ 1.22
MMP9-201ENST00000372330 CCDC39Q9UFE4 941 aa22.66■■□□□ 1.22
MMP9-201ENST00000372330 ZFYVE9O95405 1425 aa22.66■■□□□ 1.22
MMP9-201ENST00000372330 TULP4Q9NRJ4 1543 aa22.66■■□□□ 1.22
MMP9-201ENST00000372330 SHPRHQ149N8 1683 aa22.66■■□□□ 1.22
MMP9-201ENST00000372330 KIF13AQ9H1H9 1805 aa22.65■■□□□ 1.22
MMP9-201ENST00000372330 RLBP1P12271 317 aa22.65■■□□□ 1.22
MMP9-201ENST00000372330 MYO5BQ9ULV0 1848 aa22.64■■□□□ 1.22
MMP9-201ENST00000372330 PREX1Q8TCU6 1659 aa22.64■■□□□ 1.22
MMP9-201ENST00000372330 ANKRD36BQ8N2N9 1353 aa22.64■■□□□ 1.21
MMP9-201ENST00000372330 HDAC1Q13547 482 aaPredicted RBP22.64■■□□□ 1.21
MMP9-201ENST00000372330 BBXQ8WY36 941 aaPredicted RBP22.63■■□□□ 1.21
MMP9-201ENST00000372330 K7ELQ4 463 aaPredicted RBP22.63■■□□□ 1.21
MMP9-201ENST00000372330 BAG4O95429 457 aaKnown RBP22.63■■□□□ 1.21
MMP9-201ENST00000372330 MVPQ14764 893 aaKnown RBP22.63■■□□□ 1.21
MMP9-201ENST00000372330 RUNDC1Q96C34 613 aa22.62■■□□□ 1.21
MMP9-201ENST00000372330 NSD2O96028 1365 aa22.61■■□□□ 1.21
MMP9-201ENST00000372330 SAFB2Q14151 953 aaKnown RBP eCLIP22.61■■□□□ 1.21
MMP9-201ENST00000372330 PPP4R3BQ5MIZ7 849 aa22.61■■□□□ 1.21
MMP9-201ENST00000372330 FBXO31Q5XUX0 539 aaPredicted RBP22.61■■□□□ 1.21
MMP9-201ENST00000372330 MYRIPQ8NFW9 859 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms