RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 ACEP12821 1306 aa27■■□□□ 1.91
TMEM53-201ENST00000372235 PLEKHG5O94827 1062 aa27■■□□□ 1.91
TMEM53-201ENST00000372235 NBPF8Q3BBV2 869 aa27■■□□□ 1.91
TMEM53-201ENST00000372235 BRD4O60885 1362 aaPredicted RBP26.99■■□□□ 1.91
TMEM53-201ENST00000372235 FAM83GA6ND36 823 aa26.99■■□□□ 1.91
TMEM53-201ENST00000372235 CCDC125Q86Z20 511 aa26.99■■□□□ 1.91
TMEM53-201ENST00000372235 RALGAPBQ86X10 1494 aa26.99■■□□□ 1.91
TMEM53-201ENST00000372235 TOPAZ1Q8N9V7 1692 aa26.98■■□□□ 1.91
TMEM53-201ENST00000372235 TRPM1Q7Z4N2 1603 aa26.98■■□□□ 1.91
TMEM53-201ENST00000372235 EVC2Q86UK5 1308 aa26.98■■□□□ 1.91
TMEM53-201ENST00000372235 CCDC9Q9Y3X0 531 aaKnown RBP26.97■■□□□ 1.91
TMEM53-201ENST00000372235 PLCH1Q4KWH8 1693 aa26.96■■□□□ 1.91
TMEM53-201ENST00000372235 QRICH2Q9H0J4 1663 aa26.95■■□□□ 1.91
TMEM53-201ENST00000372235 PPIP5K1Q6PFW1 1433 aa26.95■■□□□ 1.9
TMEM53-201ENST00000372235 COL14A1Q05707 1796 aaKnown RBP26.94■■□□□ 1.9
TMEM53-201ENST00000372235 TONSLQ96HA7 1378 aa26.94■■□□□ 1.9
TMEM53-201ENST00000372235 PRDM11Q9NQV5 511 aa26.93■■□□□ 1.9
TMEM53-201ENST00000372235 BTG4Q9NY30 223 aa26.93■■□□□ 1.9
TMEM53-201ENST00000372235 ONECUT3O60422 494 aaPredicted RBP26.92■■□□□ 1.9
TMEM53-201ENST00000372235 CABP2Q9NPB3 220 aa26.92■■□□□ 1.9
TMEM53-201ENST00000372235 GLI3P10071 1580 aa26.92■■□□□ 1.9
TMEM53-201ENST00000372235 ABTB2Q8N961 1025 aa26.91■■□□□ 1.9
TMEM53-201ENST00000372235 NLRP13Q86W25 1043 aa26.89■■□□□ 1.9
TMEM53-201ENST00000372235 SEPT12Q8IYM1 358 aa26.88■■□□□ 1.89
TMEM53-201ENST00000372235 CRYBG1Q9Y4K1 1723 aa26.87■■□□□ 1.89
TMEM53-201ENST00000372235 ZNF692Q9BU19 519 aaPredicted RBP26.86■■□□□ 1.89
TMEM53-201ENST00000372235 CABP1Q9NZU7 370 aa26.86■■□□□ 1.89
TMEM53-201ENST00000372235 CARD11Q9BXL7 1154 aa26.85■■□□□ 1.89
TMEM53-201ENST00000372235 KIAA0232Q92628 1395 aa26.84■■□□□ 1.89
TMEM53-201ENST00000372235 SBNO2Q9Y2G9 1366 aa26.84■■□□□ 1.89
TMEM53-201ENST00000372235 NRAPQ86VF7 1730 aa26.83■■□□□ 1.89
TMEM53-201ENST00000372235 A0A0G2JS52 829 aa26.82■■□□□ 1.88
TMEM53-201ENST00000372235 MYT1Q01538 1121 aa26.82■■□□□ 1.88
TMEM53-201ENST00000372235 KRT27Q7Z3Y8 459 aa26.82■■□□□ 1.88
TMEM53-201ENST00000372235 PHRF1Q9P1Y6 1649 aaKnown RBP26.82■■□□□ 1.88
TMEM53-201ENST00000372235 USP6P35125 1406 aa26.82■■□□□ 1.88
TMEM53-201ENST00000372235 SLC24A1O60721 1099 aa26.81■■□□□ 1.88
TMEM53-201ENST00000372235 NUTM2GQ5VZR2 741 aa26.81■■□□□ 1.88
TMEM53-201ENST00000372235 USP19O94966 1318 aa26.81■■□□□ 1.88
TMEM53-201ENST00000372235 SPATA31A5Q5VU36 1347 aa26.81■■□□□ 1.88
TMEM53-201ENST00000372235 SPATA31A7Q8IWB4 1347 aa26.81■■□□□ 1.88
TMEM53-201ENST00000372235 CPDO75976 1380 aa26.81■■□□□ 1.88
TMEM53-201ENST00000372235 ZC3H6P61129 1189 aaKnown RBP26.8■■□□□ 1.88
TMEM53-201ENST00000372235 SF3B2Q13435 895 aaKnown RBP26.8■■□□□ 1.88
TMEM53-201ENST00000372235 BLMP54132 1417 aaPredicted RBP26.79■■□□□ 1.88
TMEM53-201ENST00000372235 EVA1CP58658 441 aa26.78■■□□□ 1.88
TMEM53-201ENST00000372235 FAM98CQ17RN3 349 aaKnown RBP26.78■■□□□ 1.88
TMEM53-201ENST00000372235 GCP02774 474 aa26.77■■□□□ 1.88
TMEM53-201ENST00000372235 NLRP6P59044 892 aa26.76■■□□□ 1.87
TMEM53-201ENST00000372235 CHRNA2Q15822 529 aa26.75■■□□□ 1.87
TMEM53-201ENST00000372235 NRKQ7Z2Y5 1582 aa26.75■■□□□ 1.87
TMEM53-201ENST00000372235 TTC21AQ8NDW8 1320 aa26.74■■□□□ 1.87
TMEM53-201ENST00000372235 STRN4Q9NRL3 753 aa26.74■■□□□ 1.87
TMEM53-201ENST00000372235 SPATA31A1Q5TZJ5 1347 aa26.73■■□□□ 1.87
TMEM53-201ENST00000372235 PUS7Q96PZ0 661 aaKnown RBP26.73■■□□□ 1.87
TMEM53-201ENST00000372235 BRWD3Q6RI45 1802 aa26.72■■□□□ 1.87
TMEM53-201ENST00000372235 SSH2Q76I76 1423 aa26.72■■□□□ 1.87
TMEM53-201ENST00000372235 KCNH5Q8NCM2 988 aa26.71■■□□□ 1.87
TMEM53-201ENST00000372235 ZRANB1Q9UGI0 708 aa26.7■■□□□ 1.86
TMEM53-201ENST00000372235 THRAP3Q9Y2W1 955 aaKnown RBP26.69■■□□□ 1.86
TMEM53-201ENST00000372235 TTC21BQ7Z4L5 1316 aa26.68■■□□□ 1.86
TMEM53-201ENST00000372235 CPSF1Q10570 1443 aaKnown RBP26.68■■□□□ 1.86
TMEM53-201ENST00000372235 BARGINQ6ZT62 677 aa26.68■■□□□ 1.86
TMEM53-201ENST00000372235 KTN1Q86UP2 1357 aaKnown RBP26.68■■□□□ 1.86
TMEM53-201ENST00000372235 SLIT3O75094 1523 aa26.66■■□□□ 1.86
TMEM53-201ENST00000372235 AATKQ6ZMQ8 1374 aa26.66■■□□□ 1.86
TMEM53-201ENST00000372235 HDGFL2Q7Z4V5 671 aaPredicted RBP26.65■■□□□ 1.86
TMEM53-201ENST00000372235 TIMELESSQ9UNS1 1208 aa26.65■■□□□ 1.86
TMEM53-201ENST00000372235 AKAP12Q02952 1782 aa26.65■■□□□ 1.86
TMEM53-201ENST00000372235 THSD7AQ9UPZ6 1657 aa26.64■■□□□ 1.86
TMEM53-201ENST00000372235 CAMTA1Q9Y6Y1 1673 aa26.64■■□□□ 1.86
TMEM53-201ENST00000372235 TCP11L2Q8N4U5 519 aa26.64■■□□□ 1.86
TMEM53-201ENST00000372235 CLSPNQ9HAW4 1339 aa26.64■■□□□ 1.85
TMEM53-201ENST00000372235 LMO7Q8WWI1 1683 aa26.63■■□□□ 1.85
TMEM53-201ENST00000372235 BAG6P46379 1132 aa26.63■■□□□ 1.85
TMEM53-201ENST00000372235 TERF2IPQ9NYB0 399 aa26.63■■□□□ 1.85
TMEM53-201ENST00000372235 EP400Q96L91 3159 aa26.63■■□□□ 1.85
TMEM53-201ENST00000372235 TMC1Q8TDI8 760 aa26.62■■□□□ 1.85
TMEM53-201ENST00000372235 USP35Q9P2H5 1018 aa26.62■■□□□ 1.85
TMEM53-201ENST00000372235 NINLQ9Y2I6 1382 aa26.61■■□□□ 1.85
TMEM53-201ENST00000372235 PIK3C2AO00443 1686 aa26.61■■□□□ 1.85
TMEM53-201ENST00000372235 C11orf95C9JLR9 678 aaPredicted RBP26.61■■□□□ 1.85
TMEM53-201ENST00000372235 LARP1Q6PKG0 1096 aaKnown RBP26.61■■□□□ 1.85
TMEM53-201ENST00000372235 FAM196AQ6ZSG2 479 aa26.61■■□□□ 1.85
TMEM53-201ENST00000372235 PDE3BQ13370 1112 aa26.6■■□□□ 1.85
TMEM53-201ENST00000372235 COL5A2P05997 1499 aaPredicted RBP26.6■■□□□ 1.85
TMEM53-201ENST00000372235 CRB1P82279 1406 aa26.58■■□□□ 1.85
TMEM53-201ENST00000372235 ZBTB7CA1YPR0 619 aa26.58■■□□□ 1.85
TMEM53-201ENST00000372235 ST20-MTHFSA0A0A6YYL1 179 aa26.56■■□□□ 1.84
TMEM53-201ENST00000372235 ARHGEF25Q86VW2 580 aa26.56■■□□□ 1.84
TMEM53-201ENST00000372235 USP31Q70CQ4 1352 aa26.56■■□□□ 1.84
TMEM53-201ENST00000372235 MON2Q7Z3U7 1717 aa26.56■■□□□ 1.84
TMEM53-201ENST00000372235 DEFB132Q7Z7B7 95 aa26.55■■□□□ 1.84
TMEM53-201ENST00000372235 EDC4Q6P2E9 1401 aaKnown RBP26.54■■□□□ 1.84
TMEM53-201ENST00000372235 RGPD1P0DJD0 1748 aa26.53■■□□□ 1.84
TMEM53-201ENST00000372235 TOM1L2Q6ZVM7 507 aa26.53■■□□□ 1.84
TMEM53-201ENST00000372235 TESK2Q96S53 571 aa26.53■■□□□ 1.84
TMEM53-201ENST00000372235 CDCA7Q9BWT1 371 aaPredicted RBP26.53■■□□□ 1.84
TMEM53-201ENST00000372235 SLC12A5Q9H2X9 1139 aa26.53■■□□□ 1.84
TMEM53-201ENST00000372235 ABCC6O95255 1503 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms