RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 MYBBP1AQ9BQG0 1328 aaKnown RBP18.13■□□□□ 0.49
GTF3C4-201ENST00000372146 DDX23Q9BUQ8 820 aaKnown RBP18.13■□□□□ 0.49
GTF3C4-201ENST00000372146 RALYLQ86SE5 291 aaKnown RBP18.12■□□□□ 0.49
GTF3C4-201ENST00000372146 CCDC148Q8NFR7 591 aa18.12■□□□□ 0.49
GTF3C4-201ENST00000372146 TXLNAP40222 546 aa18.12■□□□□ 0.49
GTF3C4-201ENST00000372146 KIAA1328Q86T90 577 aa18.12■□□□□ 0.49
GTF3C4-201ENST00000372146 CASQ1P31415 396 aa18.11■□□□□ 0.49
GTF3C4-201ENST00000372146 DAAM2Q86T65 1068 aa18.11■□□□□ 0.49
GTF3C4-201ENST00000372146 PIP4K2AP48426 406 aaPredicted RBP18.11■□□□□ 0.49
GTF3C4-201ENST00000372146 UBE4AQ14139 1066 aa18.11■□□□□ 0.49
GTF3C4-201ENST00000372146 SPDYE4A6NLX3 237 aa18.11■□□□□ 0.49
GTF3C4-201ENST00000372146 PSMA5P28066 241 aa18.1■□□□□ 0.49
GTF3C4-201ENST00000372146 CCDC97Q96F63 343 aaPredicted RBP18.1■□□□□ 0.49
GTF3C4-201ENST00000372146 PUS7Q96PZ0 661 aaKnown RBP18.1■□□□□ 0.49
GTF3C4-201ENST00000372146 CBFA2T2O43439 604 aa18.1■□□□□ 0.49
GTF3C4-201ENST00000372146 CCDC160A6NGH7 325 aa18.09■□□□□ 0.49
GTF3C4-201ENST00000372146 KIF3BO15066 747 aa18.09■□□□□ 0.49
GTF3C4-201ENST00000372146 ZNF396Q96N95 335 aaPredicted RBP18.09■□□□□ 0.49
GTF3C4-201ENST00000372146 ELL2O00472 640 aaPredicted RBP18.09■□□□□ 0.49
GTF3C4-201ENST00000372146 GOPCQ9HD26 462 aa18.09■□□□□ 0.49
GTF3C4-201ENST00000372146 SRRTQ9BXP5 876 aaKnown RBP18.09■□□□□ 0.49
GTF3C4-201ENST00000372146 TMEM132AQ24JP5 1023 aa18.09■□□□□ 0.49
GTF3C4-201ENST00000372146 ABCC8Q09428 1581 aa18.09■□□□□ 0.49
GTF3C4-201ENST00000372146 CPSF2Q9P2I0 782 aaKnown RBP18.09■□□□□ 0.49
GTF3C4-201ENST00000372146 MCM3P25205 808 aa18.08■□□□□ 0.49
GTF3C4-201ENST00000372146 GBP3Q9H0R5 595 aa18.08■□□□□ 0.49
GTF3C4-201ENST00000372146 PLCD3Q8N3E9 789 aa18.08■□□□□ 0.49
GTF3C4-201ENST00000372146 LNPKQ9C0E8 428 aa18.08■□□□□ 0.49
GTF3C4-201ENST00000372146 WDR66Q8TBY9 1149 aa18.08■□□□□ 0.49
GTF3C4-201ENST00000372146 PDCP20941 246 aa18.08■□□□□ 0.48
GTF3C4-201ENST00000372146 SAMD1Q6SPF0 538 aaPredicted RBP18.08■□□□□ 0.48
GTF3C4-201ENST00000372146 STIM1Q13586 685 aa18.08■□□□□ 0.48
GTF3C4-201ENST00000372146 ZSCAN30Q86W11 494 aa18.07■□□□□ 0.48
GTF3C4-201ENST00000372146 TANGO6Q9C0B7 1094 aa18.07■□□□□ 0.48
GTF3C4-201ENST00000372146 CECR2Q9BXF3 1484 aa18.07■□□□□ 0.48
GTF3C4-201ENST00000372146 TDO2P48775 406 aa18.07■□□□□ 0.48
GTF3C4-201ENST00000372146 IFFO1Q0D2I5 559 aa18.07■□□□□ 0.48
GTF3C4-201ENST00000372146 EIF4G1Q04637 1599 aaKnown RBP18.07■□□□□ 0.48
GTF3C4-201ENST00000372146 CCDC175P0C221 793 aa18.07■□□□□ 0.48
GTF3C4-201ENST00000372146 DACH1Q9UI36 760 aa18.07■□□□□ 0.48
GTF3C4-201ENST00000372146 LMAN1P49257 510 aa18.06■□□□□ 0.48
GTF3C4-201ENST00000372146 ERC2O15083 957 aa18.06■□□□□ 0.48
GTF3C4-201ENST00000372146 JAKMIP3Q5VZ66 844 aa18.06■□□□□ 0.48
GTF3C4-201ENST00000372146 SERPINA10Q9UK55 444 aa18.06■□□□□ 0.48
GTF3C4-201ENST00000372146 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.06■□□□□ 0.48
GTF3C4-201ENST00000372146 SOGA1O94964 1423 aa18.06■□□□□ 0.48
GTF3C4-201ENST00000372146 EPB41L2O43491 1005 aaKnown RBP18.05■□□□□ 0.48
GTF3C4-201ENST00000372146 CDC45O75419 566 aa18.05■□□□□ 0.48
GTF3C4-201ENST00000372146 PTPN14Q15678 1187 aa18.05■□□□□ 0.48
GTF3C4-201ENST00000372146 CTR9Q6PD62 1173 aa18.05■□□□□ 0.48
GTF3C4-201ENST00000372146 KRT18P05783 430 aaKnown RBP18.05■□□□□ 0.48
GTF3C4-201ENST00000372146 ARHGAP29Q52LW3 1261 aa18.05■□□□□ 0.48
GTF3C4-201ENST00000372146 KIF18AQ8NI77 898 aa18.04■□□□□ 0.48
GTF3C4-201ENST00000372146 DZIP1LQ8IYY4 767 aaKnown RBP18.04■□□□□ 0.48
GTF3C4-201ENST00000372146 TERF2IPQ9NYB0 399 aa18.04■□□□□ 0.48
GTF3C4-201ENST00000372146 SSR1P43307 286 aaKnown RBP18.04■□□□□ 0.48
GTF3C4-201ENST00000372146 HDGFP51858 240 aaKnown RBP18.04■□□□□ 0.48
GTF3C4-201ENST00000372146 ME1P48163 572 aa18.04■□□□□ 0.48
GTF3C4-201ENST00000372146 GCOM1H8Y6P7 765 aaPredicted RBP18.03■□□□□ 0.48
GTF3C4-201ENST00000372146 MYZAPP0CAP1 466 aa18.03■□□□□ 0.48
GTF3C4-201ENST00000372146 BMS1Q14692 1282 aaKnown RBP18.03■□□□□ 0.48
GTF3C4-201ENST00000372146 TMCO5BA8MYB1 307 aa18.03■□□□□ 0.48
GTF3C4-201ENST00000372146 SMC1AQ14683 1233 aaKnown RBP18.03■□□□□ 0.48
GTF3C4-201ENST00000372146 FYB1O15117 783 aa18.03■□□□□ 0.48
GTF3C4-201ENST00000372146 STK38Q15208 465 aa18.03■□□□□ 0.48
GTF3C4-201ENST00000372146 GIGYF2Q6Y7W6 1299 aaKnown RBP18.02■□□□□ 0.48
GTF3C4-201ENST00000372146 NAP1L3Q99457 506 aaPredicted RBP18.02■□□□□ 0.48
GTF3C4-201ENST00000372146 FHAD1B1AJZ9 1412 aa18.02■□□□□ 0.48
GTF3C4-201ENST00000372146 HSP90AB4PQ58FF6 505 aa18.02■□□□□ 0.48
GTF3C4-201ENST00000372146 NGEFQ8N5V2 710 aa18.02■□□□□ 0.48
GTF3C4-201ENST00000372146 AMPHP49418 695 aa18.02■□□□□ 0.47
GTF3C4-201ENST00000372146 ATP2B1P20020 1258 aa18.02■□□□□ 0.47
GTF3C4-201ENST00000372146 G3BP1Q13283 466 aaKnown RBP eCLIP18.02■□□□□ 0.47
GTF3C4-201ENST00000372146 LTV1Q96GA3 475 aaPredicted RBP18.02■□□□□ 0.47
GTF3C4-201ENST00000372146 WWC2Q6AWC2 1192 aa18.02■□□□□ 0.47
GTF3C4-201ENST00000372146 NECTIN2Q92692 538 aa18.01■□□□□ 0.47
GTF3C4-201ENST00000372146 RAI14Q9P0K7 980 aa18.01■□□□□ 0.47
GTF3C4-201ENST00000372146 MTMR7Q9Y216 660 aa18.01■□□□□ 0.47
GTF3C4-201ENST00000372146 KIF2AO00139 706 aaPredicted RBP18.01■□□□□ 0.47
GTF3C4-201ENST00000372146 CNTROBQ8N137 903 aa18.01■□□□□ 0.47
GTF3C4-201ENST00000372146 FILIP1Q7Z7B0 1213 aa18■□□□□ 0.47
GTF3C4-201ENST00000372146 NEK4P51957 841 aa18■□□□□ 0.47
GTF3C4-201ENST00000372146 TAF4BQ92750 862 aa18■□□□□ 0.47
GTF3C4-201ENST00000372146 CWC22Q9HCG8 908 aaKnown RBP18■□□□□ 0.47
GTF3C4-201ENST00000372146 ZWINTO95229 277 aa18■□□□□ 0.47
GTF3C4-201ENST00000372146 MCM2P49736 904 aa18■□□□□ 0.47
GTF3C4-201ENST00000372146 SPECC1LQ69YQ0 1117 aa18■□□□□ 0.47
GTF3C4-201ENST00000372146 RAB3GAP2Q9H2M9 1393 aa18■□□□□ 0.47
GTF3C4-201ENST00000372146 FEZ1Q99689 392 aa17.99■□□□□ 0.47
GTF3C4-201ENST00000372146 SYCE3A1L190 88 aa17.99■□□□□ 0.47
GTF3C4-201ENST00000372146 JMYQ8N9B5 988 aa17.99■□□□□ 0.47
GTF3C4-201ENST00000372146 FAM114A1Q8IWE2 563 aa17.99■□□□□ 0.47
GTF3C4-201ENST00000372146 KIF5CO60282 957 aa17.99■□□□□ 0.47
GTF3C4-201ENST00000372146 HSPA4P34932 840 aa17.99■□□□□ 0.47
GTF3C4-201ENST00000372146 C6orf163Q5TEZ5 329 aa17.98■□□□□ 0.47
GTF3C4-201ENST00000372146 XPCQ01831 940 aaPredicted RBP17.98■□□□□ 0.47
GTF3C4-201ENST00000372146 PKD2Q13563 968 aa17.98■□□□□ 0.47
GTF3C4-201ENST00000372146 MSL1Q68DK7 614 aa17.98■□□□□ 0.47
GTF3C4-201ENST00000372146 ANKRD18BA2A2Z9 1011 aa17.98■□□□□ 0.47
GTF3C4-201ENST00000372146 ZNF397Q8NF99 534 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms