RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 CABLES1Q8TDN4 633 aa19.08■□□□□ 0.65
LDB3-204ENST00000372066 ZBED9Q6R2W3 1325 aa19.08■□□□□ 0.64
LDB3-204ENST00000372066 CCDC184Q52MB2 194 aa19.07■□□□□ 0.64
LDB3-204ENST00000372066 CCDC125Q86Z20 511 aa19.07■□□□□ 0.64
LDB3-204ENST00000372066 BRD4O60885 1362 aaPredicted RBP19.07■□□□□ 0.64
LDB3-204ENST00000372066 SLC24A1O60721 1099 aa19.06■□□□□ 0.64
LDB3-204ENST00000372066 PMFBP1Q8TBY8 1022 aa19.06■□□□□ 0.64
LDB3-204ENST00000372066 KNDC1Q76NI1 1749 aa19.05■□□□□ 0.64
LDB3-204ENST00000372066 ZRANB1Q9UGI0 708 aa19.05■□□□□ 0.64
LDB3-204ENST00000372066 TRAK1Q9UPV9 953 aa19.05■□□□□ 0.64
LDB3-204ENST00000372066 MYBBP1AQ9BQG0 1328 aaKnown RBP19.05■□□□□ 0.64
LDB3-204ENST00000372066 CDCA8Q53HL2 280 aa19.04■□□□□ 0.64
LDB3-204ENST00000372066 FMN2Q9NZ56 1722 aa19.04■□□□□ 0.64
LDB3-204ENST00000372066 TNS3Q68CZ2 1445 aa19.03■□□□□ 0.64
LDB3-204ENST00000372066 SLIT2O94813 1529 aa19.03■□□□□ 0.64
LDB3-204ENST00000372066 SBNO1A3KN83 1393 aa19.03■□□□□ 0.64
LDB3-204ENST00000372066 PARD3Q8TEW0 1356 aa19.03■□□□□ 0.64
LDB3-204ENST00000372066 FAM9BQ8IZU0 186 aa19.02■□□□□ 0.64
LDB3-204ENST00000372066 CCDC9Q9Y3X0 531 aaKnown RBP19.02■□□□□ 0.64
LDB3-204ENST00000372066 KIF1AQ12756 1690 aa19.01■□□□□ 0.63
LDB3-204ENST00000372066 VPS72Q15906 364 aa19.01■□□□□ 0.63
LDB3-204ENST00000372066 SEPT12Q8IYM1 358 aa19.01■□□□□ 0.63
LDB3-204ENST00000372066 ARHGEF10O15013 1369 aa19.01■□□□□ 0.63
LDB3-204ENST00000372066 MINK1Q8N4C8 1332 aaPredicted RBP19■□□□□ 0.63
LDB3-204ENST00000372066 FAM83GA6ND36 823 aa18.99■□□□□ 0.63
LDB3-204ENST00000372066 MYOM1P52179 1685 aa18.99■□□□□ 0.63
LDB3-204ENST00000372066 ANKARQ7Z5J8 1434 aa18.98■□□□□ 0.63
LDB3-204ENST00000372066 FKBP8Q14318 412 aa18.98■□□□□ 0.63
LDB3-204ENST00000372066 INSRP06213 1382 aa18.97■□□□□ 0.63
LDB3-204ENST00000372066 MARF1Q9Y4F3 1742 aaKnown RBP18.97■□□□□ 0.63
LDB3-204ENST00000372066 TMC1Q8TDI8 760 aa18.97■□□□□ 0.63
LDB3-204ENST00000372066 DLC1Q96QB1 1528 aa18.96■□□□□ 0.63
LDB3-204ENST00000372066 SBNO2Q9Y2G9 1366 aa18.96■□□□□ 0.63
LDB3-204ENST00000372066 WASLO00401 505 aaPredicted RBP18.96■□□□□ 0.63
LDB3-204ENST00000372066 PER1O15534 1290 aaPredicted RBP18.96■□□□□ 0.63
LDB3-204ENST00000372066 USP32Q8NFA0 1604 aa18.95■□□□□ 0.62
LDB3-204ENST00000372066 ONECUT3O60422 494 aaPredicted RBP18.95■□□□□ 0.62
LDB3-204ENST00000372066 SF3B2Q13435 895 aaKnown RBP18.95■□□□□ 0.62
LDB3-204ENST00000372066 ERICH6BQ5W0A0 696 aa18.95■□□□□ 0.62
LDB3-204ENST00000372066 NLRP13Q86W25 1043 aa18.95■□□□□ 0.62
LDB3-204ENST00000372066 NGDNQ8NEJ9 315 aaKnown RBP18.95■□□□□ 0.62
LDB3-204ENST00000372066 GLI3P10071 1580 aa18.95■□□□□ 0.62
LDB3-204ENST00000372066 PRR36Q9H6K5 1346 aa18.94■□□□□ 0.62
LDB3-204ENST00000372066 A0A0G2JS52 829 aa18.94■□□□□ 0.62
LDB3-204ENST00000372066 MYT1Q01538 1121 aa18.94■□□□□ 0.62
LDB3-204ENST00000372066 PNISRQ8TF01 805 aaKnown RBP18.94■□□□□ 0.62
LDB3-204ENST00000372066 KRT27Q7Z3Y8 459 aa18.93■□□□□ 0.62
LDB3-204ENST00000372066 BLMP54132 1417 aaPredicted RBP18.93■□□□□ 0.62
LDB3-204ENST00000372066 PAK3O75914 559 aaPredicted RBP18.93■□□□□ 0.62
LDB3-204ENST00000372066 DEFB132Q7Z7B7 95 aa18.93■□□□□ 0.62
LDB3-204ENST00000372066 BTG4Q9NY30 223 aa18.93■□□□□ 0.62
LDB3-204ENST00000372066 ADGRB1O14514 1584 aa18.93■□□□□ 0.62
LDB3-204ENST00000372066 RGPD8O14715 1765 aaPredicted RBP18.92■□□□□ 0.62
LDB3-204ENST00000372066 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.92■□□□□ 0.62
LDB3-204ENST00000372066 SMG6Q86US8 1419 aaKnown RBP18.91■□□□□ 0.62
LDB3-204ENST00000372066 EP400Q96L91 3159 aa18.91■□□□□ 0.62
LDB3-204ENST00000372066 SRCAPQ6ZRS2 3230 aa18.91■□□□□ 0.62
LDB3-204ENST00000372066 NPC1L1Q9UHC9 1359 aa18.9■□□□□ 0.62
LDB3-204ENST00000372066 FAM98CQ17RN3 349 aaKnown RBP18.89■□□□□ 0.62
LDB3-204ENST00000372066 QRICH2Q9H0J4 1663 aa18.89■□□□□ 0.61
LDB3-204ENST00000372066 PANK3Q9H999 370 aa18.89■□□□□ 0.61
LDB3-204ENST00000372066 NUDT16Q96DE0 195 aaKnown RBP18.88■□□□□ 0.61
LDB3-204ENST00000372066 ADGRB2O60241 1585 aa18.87■□□□□ 0.61
LDB3-204ENST00000372066 TULP4Q9NRJ4 1543 aa18.86■□□□□ 0.61
LDB3-204ENST00000372066 CDK19Q9BWU1 502 aa18.85■□□□□ 0.61
LDB3-204ENST00000372066 PRDM11Q9NQV5 511 aa18.85■□□□□ 0.61
LDB3-204ENST00000372066 ARHGEF28Q8N1W1 1705 aaKnown RBP18.84■□□□□ 0.61
LDB3-204ENST00000372066 SPATA31A5Q5VU36 1347 aa18.83■□□□□ 0.6
LDB3-204ENST00000372066 SPATA31A7Q8IWB4 1347 aa18.83■□□□□ 0.6
LDB3-204ENST00000372066 PLCH1Q4KWH8 1693 aa18.83■□□□□ 0.6
LDB3-204ENST00000372066 NWD2Q9ULI1 1742 aa18.82■□□□□ 0.6
LDB3-204ENST00000372066 BAG6P46379 1132 aa18.82■□□□□ 0.6
LDB3-204ENST00000372066 NUTM2GQ5VZR2 741 aa18.82■□□□□ 0.6
LDB3-204ENST00000372066 KNSTRNQ9Y448 316 aa18.82■□□□□ 0.6
LDB3-204ENST00000372066 CNGB1Q14028 1251 aaPredicted RBP18.81■□□□□ 0.6
LDB3-204ENST00000372066 NUDCQ9Y266 331 aa18.81■□□□□ 0.6
LDB3-204ENST00000372066 CHRNA2Q15822 529 aa18.81■□□□□ 0.6
LDB3-204ENST00000372066 FAM182BQ5T319 152 aa18.81■□□□□ 0.6
LDB3-204ENST00000372066 BRWD3Q6RI45 1802 aa18.8■□□□□ 0.6
LDB3-204ENST00000372066 CENPJQ9HC77 1338 aaPredicted RBP18.8■□□□□ 0.6
LDB3-204ENST00000372066 TRPM3Q9HCF6 1732 aaPredicted RBP18.8■□□□□ 0.6
LDB3-204ENST00000372066 ZC3H6P61129 1189 aaKnown RBP18.8■□□□□ 0.6
LDB3-204ENST00000372066 CCDC61Q9Y6R9 512 aa18.8■□□□□ 0.6
LDB3-204ENST00000372066 ABCA3Q99758 1704 aa18.79■□□□□ 0.6
LDB3-204ENST00000372066 STRN4Q9NRL3 753 aa18.79■□□□□ 0.6
LDB3-204ENST00000372066 ACEP12821 1306 aa18.79■□□□□ 0.6
LDB3-204ENST00000372066 KIAA0232Q92628 1395 aa18.79■□□□□ 0.6
LDB3-204ENST00000372066 ALS2Q96Q42 1657 aa18.77■□□□□ 0.6
LDB3-204ENST00000372066 ATP7BP35670 1465 aa18.77■□□□□ 0.59
LDB3-204ENST00000372066 PLEKHG3A1L390 1219 aa18.76■□□□□ 0.59
LDB3-204ENST00000372066 EVA1CP58658 441 aa18.76■□□□□ 0.59
LDB3-204ENST00000372066 EN1Q05925 392 aaPredicted RBP18.76■□□□□ 0.59
LDB3-204ENST00000372066 PDE3BQ13370 1112 aa18.76■□□□□ 0.59
LDB3-204ENST00000372066 AMER1Q5JTC6 1135 aaPredicted RBP18.76■□□□□ 0.59
LDB3-204ENST00000372066 CC2D1BQ5T0F9 858 aaKnown RBP18.76■□□□□ 0.59
LDB3-204ENST00000372066 PUS7Q96PZ0 661 aaKnown RBP18.76■□□□□ 0.59
LDB3-204ENST00000372066 COL14A1Q05707 1796 aaKnown RBP18.76■□□□□ 0.59
LDB3-204ENST00000372066 SPATA31A1Q5TZJ5 1347 aa18.76■□□□□ 0.59
LDB3-204ENST00000372066 PSDA5PKW4 1024 aaPredicted RBP18.76■□□□□ 0.59
LDB3-204ENST00000372066 ABTB2Q8N961 1025 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms