RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 PPP4R3BQ5MIZ7 849 aa10.93□□□□□ -0.66
SMARCA1-203ENST00000371123 MORC1Q86VD1 984 aa10.93□□□□□ -0.66
SMARCA1-203ENST00000371123 IGSF3O75054 1194 aa10.93□□□□□ -0.66
SMARCA1-203ENST00000371123 ISY1Q9ULR0 285 aaKnown RBP10.93□□□□□ -0.66
SMARCA1-203ENST00000371123 PLCB2Q00722 1185 aa10.93□□□□□ -0.66
SMARCA1-203ENST00000371123 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.93□□□□□ -0.66
SMARCA1-203ENST00000371123 PRIM1P49642 420 aaKnown RBP10.92□□□□□ -0.66
SMARCA1-203ENST00000371123 RBM27Q9P2N5 1060 aaKnown RBP10.92□□□□□ -0.66
SMARCA1-203ENST00000371123 VGLL3A8MV65 326 aa10.92□□□□□ -0.66
SMARCA1-203ENST00000371123 CCDC94Q9BW85 323 aaPredicted RBP10.92□□□□□ -0.66
SMARCA1-203ENST00000371123 RBM25P49756 843 aaKnown RBP10.92□□□□□ -0.66
SMARCA1-203ENST00000371123 TMEM132EQ6IEE7 984 aa10.92□□□□□ -0.66
SMARCA1-203ENST00000371123 CYB5RLQ6IPT4 315 aa10.92□□□□□ -0.66
SMARCA1-203ENST00000371123 C14orf37Q86TY3 774 aa10.92□□□□□ -0.66
SMARCA1-203ENST00000371123 WWC1Q8IX03 1113 aa10.92□□□□□ -0.66
SMARCA1-203ENST00000371123 SHANK2Q9UPX8 1470 aa10.92□□□□□ -0.66
SMARCA1-203ENST00000371123 CBX1P83916 185 aa10.91□□□□□ -0.66
SMARCA1-203ENST00000371123 ITPRIPQ8IWB1 547 aa10.91□□□□□ -0.66
SMARCA1-203ENST00000371123 GPT2Q8TD30 523 aa10.91□□□□□ -0.66
SMARCA1-203ENST00000371123 SRPK2P78362 688 aaKnown RBP10.91□□□□□ -0.66
SMARCA1-203ENST00000371123 PIK3C2GO75747 1445 aa10.91□□□□□ -0.66
SMARCA1-203ENST00000371123 KIF3BO15066 747 aa10.9□□□□□ -0.66
SMARCA1-203ENST00000371123 C17orf53Q8N3J3 647 aaPredicted RBP10.9□□□□□ -0.66
SMARCA1-203ENST00000371123 IQSEC2Q5JU85 1478 aa10.9□□□□□ -0.66
SMARCA1-203ENST00000371123 IQGAP1P46940 1657 aa10.9□□□□□ -0.66
SMARCA1-203ENST00000371123 ZSCAN23Q3MJ62 389 aa10.9□□□□□ -0.66
SMARCA1-203ENST00000371123 SNX21Q969T3 373 aa10.9□□□□□ -0.66
SMARCA1-203ENST00000371123 NAP1L2Q9ULW6 460 aaPredicted RBP10.9□□□□□ -0.66
SMARCA1-203ENST00000371123 CLEC17AQ6ZS10 378 aa10.9□□□□□ -0.66
SMARCA1-203ENST00000371123 DYNC1I1O14576 645 aa10.9□□□□□ -0.67
SMARCA1-203ENST00000371123 LMBRD1Q9NUN5 540 aa10.9□□□□□ -0.67
SMARCA1-203ENST00000371123 IBTKQ9P2D0 1353 aaPredicted RBP10.9□□□□□ -0.67
SMARCA1-203ENST00000371123 KIDINS220Q9ULH0 1771 aa10.89□□□□□ -0.67
SMARCA1-203ENST00000371123 SCAPERQ9BY12 1400 aa10.89□□□□□ -0.67
SMARCA1-203ENST00000371123 BAG4O95429 457 aaKnown RBP10.89□□□□□ -0.67
SMARCA1-203ENST00000371123 ZNF445P59923 1031 aa10.89□□□□□ -0.67
SMARCA1-203ENST00000371123 E9PSI1 815 aa10.89□□□□□ -0.67
SMARCA1-203ENST00000371123 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.89□□□□□ -0.679e-8■■■□□ 14.8
SMARCA1-203ENST00000371123 ZKSCAN5Q9Y2L8 839 aa10.89□□□□□ -0.67
SMARCA1-203ENST00000371123 CEP152O94986 1710 aa10.89□□□□□ -0.67
SMARCA1-203ENST00000371123 ARHGEF40Q8TER5 1519 aa10.89□□□□□ -0.67
SMARCA1-203ENST00000371123 MPNDQ8N594 471 aa10.89□□□□□ -0.67
SMARCA1-203ENST00000371123 ZDHHC9Q9Y397 364 aa10.88□□□□□ -0.67
SMARCA1-203ENST00000371123 EIF2AK4Q9P2K8 1649 aaKnown RBP10.88□□□□□ -0.67
SMARCA1-203ENST00000371123 KLHL40Q2TBA0 621 aa10.88□□□□□ -0.67
SMARCA1-203ENST00000371123 SIGLEC1Q9BZZ2 1709 aa10.88□□□□□ -0.67
SMARCA1-203ENST00000371123 CYP2E1P05181 493 aaPredicted RBP10.88□□□□□ -0.67
SMARCA1-203ENST00000371123 ASXL1Q8IXJ9 1541 aa10.87□□□□□ -0.67
SMARCA1-203ENST00000371123 DEPDC5O75140 1603 aa10.87□□□□□ -0.67
SMARCA1-203ENST00000371123 MAP7D2Q96T17 732 aa10.87□□□□□ -0.67
SMARCA1-203ENST00000371123 PHF23Q9BUL5 403 aaPredicted RBP10.87□□□□□ -0.67
SMARCA1-203ENST00000371123 CARD14Q9BXL6 1004 aa10.87□□□□□ -0.67
SMARCA1-203ENST00000371123 SYNMO15061 1565 aa10.87□□□□□ -0.67
SMARCA1-203ENST00000371123 MLH3Q9UHC1 1453 aa10.87□□□□□ -0.67
SMARCA1-203ENST00000371123 HECW2Q9P2P5 1572 aa10.87□□□□□ -0.67
SMARCA1-203ENST00000371123 ZFYVE16Q7Z3T8 1539 aa10.86□□□□□ -0.67
SMARCA1-203ENST00000371123 MSNP26038 577 aaKnown RBP10.86□□□□□ -0.67
SMARCA1-203ENST00000371123 CAVIN1Q6NZI2 390 aaKnown RBP10.86□□□□□ -0.67
SMARCA1-203ENST00000371123 TMEM63CQ9P1W3 806 aa10.86□□□□□ -0.67
SMARCA1-203ENST00000371123 CCDC144AA2RUR9 1427 aa10.86□□□□□ -0.67
SMARCA1-203ENST00000371123 CD109Q6YHK3 1445 aa10.86□□□□□ -0.67
SMARCA1-203ENST00000371123 TSPOAP1O95153 1857 aa10.86□□□□□ -0.67
SMARCA1-203ENST00000371123 SPDYE4A6NLX3 237 aa10.86□□□□□ -0.67
SMARCA1-203ENST00000371123 POGZQ7Z3K3 1410 aa10.86□□□□□ -0.67
SMARCA1-203ENST00000371123 HSP90AB1P08238 724 aaKnown RBP10.86□□□□□ -0.67
SMARCA1-203ENST00000371123 HSCBQ8IWL3 235 aa10.86□□□□□ -0.67
SMARCA1-203ENST00000371123 FBLN1P23142 703 aa10.85□□□□□ -0.67
SMARCA1-203ENST00000371123 FANCAO15360 1455 aa10.85□□□□□ -0.67
SMARCA1-203ENST00000371123 SASS6Q6UVJ0 657 aa10.85□□□□□ -0.67
SMARCA1-203ENST00000371123 AFAP1Q8N556 730 aa10.85□□□□□ -0.67
SMARCA1-203ENST00000371123 SMC4Q9NTJ3 1288 aa10.85□□□□□ -0.67
SMARCA1-203ENST00000371123 HS1BP3Q53T59 392 aa10.85□□□□□ -0.67
SMARCA1-203ENST00000371123 PMFBP1Q8TBY8 1022 aa10.85□□□□□ -0.67
SMARCA1-203ENST00000371123 TSR2Q969E8 191 aaKnown RBP10.85□□□□□ -0.67
SMARCA1-203ENST00000371123 AGLP35573 1532 aa10.84□□□□□ -0.67
SMARCA1-203ENST00000371123 ABCA6Q8N139 1617 aa10.84□□□□□ -0.67
SMARCA1-203ENST00000371123 CFAP70Q5T0N1 1121 aa10.84□□□□□ -0.67
SMARCA1-203ENST00000371123 MYRIPQ8NFW9 859 aa10.84□□□□□ -0.67
SMARCA1-203ENST00000371123 C1orf115Q9H7X2 142 aa10.84□□□□□ -0.67
SMARCA1-203ENST00000371123 DIP2CQ9Y2E4 1556 aa10.84□□□□□ -0.67
SMARCA1-203ENST00000371123 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.84□□□□□ -0.67
SMARCA1-203ENST00000371123 PDIA4P13667 645 aaKnown RBP10.83□□□□□ -0.68
SMARCA1-203ENST00000371123 PLCD3Q8N3E9 789 aa10.83□□□□□ -0.68
SMARCA1-203ENST00000371123 NECTIN2Q92692 538 aa10.83□□□□□ -0.68
SMARCA1-203ENST00000371123 DDX49Q9Y6V7 483 aaKnown RBP10.83□□□□□ -0.68
SMARCA1-203ENST00000371123 MVPQ14764 893 aaKnown RBP10.83□□□□□ -0.68
SMARCA1-203ENST00000371123 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.83□□□□□ -0.68
SMARCA1-203ENST00000371123 MADDQ8WXG6 1647 aa10.82□□□□□ -0.68
SMARCA1-203ENST00000371123 C9orf84Q5VXU9 1444 aa10.82□□□□□ -0.68
SMARCA1-203ENST00000371123 MCTP1Q6DN14 999 aa10.82□□□□□ -0.68
SMARCA1-203ENST00000371123 CIZ1Q9ULV3 898 aaPredicted RBP10.82□□□□□ -0.68
SMARCA1-203ENST00000371123 NINLQ9Y2I6 1382 aa10.82□□□□□ -0.68
SMARCA1-203ENST00000371123 CCDC141Q6ZP82 1450 aa10.82□□□□□ -0.68
SMARCA1-203ENST00000371123 LNPKQ9C0E8 428 aa10.82□□□□□ -0.68
SMARCA1-203ENST00000371123 ANKRD30AQ9BXX3 1397 aa10.82□□□□□ -0.68
SMARCA1-203ENST00000371123 GTF2F1P35269 517 aaKnown RBP eCLIP10.81□□□□□ -0.68
SMARCA1-203ENST00000371123 SKOR2Q2VWA4 1001 aaPredicted RBP10.81□□□□□ -0.68
SMARCA1-203ENST00000371123 SLC12A5Q9H2X9 1139 aa10.81□□□□□ -0.68
SMARCA1-203ENST00000371123 ZGPATQ8N5A5 531 aaKnown RBP10.81□□□□□ -0.68
SMARCA1-203ENST00000371123 ZNF518AQ6AHZ1 1483 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms