RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 ABCA3Q99758 1704 aa21.41■■□□□ 1.02
LMO4-201ENST00000370542 ALS2Q96Q42 1657 aa21.4■■□□□ 1.02
LMO4-201ENST00000370542 CABLES1Q8TDN4 633 aa21.39■■□□□ 1.01
LMO4-201ENST00000370542 NWD2Q9ULI1 1742 aa21.38■■□□□ 1.01
LMO4-201ENST00000370542 VPS72Q15906 364 aa21.38■■□□□ 1.01
LMO4-201ENST00000370542 ATP7BP35670 1465 aa21.38■■□□□ 1.01
LMO4-201ENST00000370542 GPRASP1Q5JY77 1395 aa21.36■■□□□ 1.01
LMO4-201ENST00000370542 EN1Q05925 392 aaPredicted RBP21.36■■□□□ 1.01
LMO4-201ENST00000370542 FAM83GA6ND36 823 aa21.34■■□□□ 1.01
LMO4-201ENST00000370542 NUDT16Q96DE0 195 aaKnown RBP21.34■■□□□ 1.01
LMO4-201ENST00000370542 PLCH1Q4KWH8 1693 aa21.34■■□□□ 1.01
LMO4-201ENST00000370542 NBPF1Q3BBV0 1214 aa21.33■■□□□ 1.01
LMO4-201ENST00000370542 ITSN1Q15811 1721 aa21.32■■□□□ 1
LMO4-201ENST00000370542 LMOD2Q6P5Q4 547 aa21.32■■□□□ 1
LMO4-201ENST00000370542 POLR3AO14802 1390 aaPredicted RBP21.32■■□□□ 1
LMO4-201ENST00000370542 CRYBG1Q9Y4K1 1723 aa21.32■■□□□ 1
LMO4-201ENST00000370542 HAP1P54257 671 aaPredicted RBP21.31■■□□□ 1
LMO4-201ENST00000370542 NGDNQ8NEJ9 315 aaKnown RBP21.31■■□□□ 1
LMO4-201ENST00000370542 CDK19Q9BWU1 502 aa21.31■■□□□ 1
LMO4-201ENST00000370542 DISP2A7MBM2 1401 aa21.3■■□□□ 1
LMO4-201ENST00000370542 PLEKHG3A1L390 1219 aa21.3■■□□□ 1
LMO4-201ENST00000370542 TOPAZ1Q8N9V7 1692 aa21.3■■□□□ 1
LMO4-201ENST00000370542 CCER1Q8TC90 406 aaPredicted RBP21.29■■□□□ 1
LMO4-201ENST00000370542 CCDC61Q9Y6R9 512 aa21.29■■□□□ 1
LMO4-201ENST00000370542 NRAPQ86VF7 1730 aa21.29■■□□□ 1
LMO4-201ENST00000370542 COL14A1Q05707 1796 aaKnown RBP21.27■■□□□ 1
LMO4-201ENST00000370542 L3MBTL2Q969R5 705 aa21.26■□□□□ 0.99
LMO4-201ENST00000370542 NBPF8Q3BBV2 869 aa21.25■□□□□ 0.99
LMO4-201ENST00000370542 DIEXFQ68CQ4 756 aaKnown RBP21.25■□□□□ 0.99
LMO4-201ENST00000370542 BTG4Q9NY30 223 aa21.24■□□□□ 0.99
LMO4-201ENST00000370542 ACEP12821 1306 aa21.24■□□□□ 0.99
LMO4-201ENST00000370542 NEUROD1Q13562 356 aa21.23■□□□□ 0.99
LMO4-201ENST00000370542 EZH2Q15910 746 aaKnown RBP21.23■□□□□ 0.99
LMO4-201ENST00000370542 CAMKK2Q96RR4 588 aa21.23■□□□□ 0.99
LMO4-201ENST00000370542 CCDC9Q9Y3X0 531 aaKnown RBP21.23■□□□□ 0.99
LMO4-201ENST00000370542 CENPJQ9HC77 1338 aaPredicted RBP21.23■□□□□ 0.99
LMO4-201ENST00000370542 RGPD1P0DJD0 1748 aa21.21■□□□□ 0.99
LMO4-201ENST00000370542 PAK3O75914 559 aaPredicted RBP21.21■□□□□ 0.99
LMO4-201ENST00000370542 PLEKHG5O94827 1062 aa21.21■□□□□ 0.99
LMO4-201ENST00000370542 SIN3AQ96ST3 1273 aa21.2■□□□□ 0.98
LMO4-201ENST00000370542 DCAF8L1A6NGE4 600 aa21.19■□□□□ 0.98
LMO4-201ENST00000370542 ZNF784Q8NCA9 323 aaPredicted RBP21.19■□□□□ 0.98
LMO4-201ENST00000370542 SPATA31A5Q5VU36 1347 aa21.19■□□□□ 0.98
LMO4-201ENST00000370542 SPATA31A7Q8IWB4 1347 aa21.19■□□□□ 0.98
LMO4-201ENST00000370542 BRD4O60885 1362 aaPredicted RBP21.19■□□□□ 0.98
LMO4-201ENST00000370542 PHRF1Q9P1Y6 1649 aaKnown RBP21.18■□□□□ 0.98
LMO4-201ENST00000370542 SENP3-EIF4A1A0A087X0R7 540 aa21.18■□□□□ 0.98
LMO4-201ENST00000370542 FAM98CQ17RN3 349 aaKnown RBP21.18■□□□□ 0.98
LMO4-201ENST00000370542 FAM182BQ5T319 152 aa21.18■□□□□ 0.98
LMO4-201ENST00000370542 TRPM1Q7Z4N2 1603 aa21.18■□□□□ 0.98
LMO4-201ENST00000370542 PRDM11Q9NQV5 511 aa21.17■□□□□ 0.98
LMO4-201ENST00000370542 KIAA0232Q92628 1395 aa21.17■□□□□ 0.98
LMO4-201ENST00000370542 NINLQ9Y2I6 1382 aa21.17■□□□□ 0.98
LMO4-201ENST00000370542 PPIP5K1Q6PFW1 1433 aa21.16■□□□□ 0.98
LMO4-201ENST00000370542 USP19O94966 1318 aa21.16■□□□□ 0.98
LMO4-201ENST00000370542 A0A0G2JS52 829 aa21.16■□□□□ 0.98
LMO4-201ENST00000370542 GTF3C3Q9Y5Q9 886 aa21.16■□□□□ 0.98
LMO4-201ENST00000370542 QRICH2Q9H0J4 1663 aa21.15■□□□□ 0.98
LMO4-201ENST00000370542 TNS1Q9HBL0 1735 aaKnown RBP21.15■□□□□ 0.98
LMO4-201ENST00000370542 CPDO75976 1380 aa21.14■□□□□ 0.98
LMO4-201ENST00000370542 PARD3Q8TEW0 1356 aa21.14■□□□□ 0.98
LMO4-201ENST00000370542 SRPK2P78362 688 aaKnown RBP21.14■□□□□ 0.97
LMO4-201ENST00000370542 CABP2Q9NPB3 220 aa21.14■□□□□ 0.97
LMO4-201ENST00000370542 THSD7AQ9UPZ6 1657 aa21.14■□□□□ 0.97
LMO4-201ENST00000370542 SSH2Q76I76 1423 aa21.12■□□□□ 0.97
LMO4-201ENST00000370542 NRKQ7Z2Y5 1582 aa21.12■□□□□ 0.97
LMO4-201ENST00000370542 C1QTNF8P60827 252 aa21.12■□□□□ 0.97
LMO4-201ENST00000370542 ABTB2Q8N961 1025 aa21.12■□□□□ 0.97
LMO4-201ENST00000370542 SPATA31A1Q5TZJ5 1347 aa21.11■□□□□ 0.97
LMO4-201ENST00000370542 SPON1Q9HCB6 807 aa21.11■□□□□ 0.97
LMO4-201ENST00000370542 ZC3H6P61129 1189 aaKnown RBP21.1■□□□□ 0.97
LMO4-201ENST00000370542 NUTM2GQ5VZR2 741 aa21.1■□□□□ 0.97
LMO4-201ENST00000370542 CABP1Q9NZU7 370 aa21.1■□□□□ 0.97
LMO4-201ENST00000370542 PPP1R1BQ9UD71 204 aaPredicted RBP21.1■□□□□ 0.97
LMO4-201ENST00000370542 USP6P35125 1406 aa21.1■□□□□ 0.97
LMO4-201ENST00000370542 LMO7Q8WWI1 1683 aa21.09■□□□□ 0.97
LMO4-201ENST00000370542 KCNQ2O43526 872 aa21.09■□□□□ 0.97
LMO4-201ENST00000370542 CHRNA2Q15822 529 aa21.09■□□□□ 0.97
LMO4-201ENST00000370542 NLRP13Q86W25 1043 aa21.09■□□□□ 0.97
LMO4-201ENST00000370542 UTRNP46939 3433 aa21.09■□□□□ 0.97
LMO4-201ENST00000370542 EVC2Q86UK5 1308 aa21.08■□□□□ 0.97
LMO4-201ENST00000370542 CAMTA1Q9Y6Y1 1673 aa21.08■□□□□ 0.96
LMO4-201ENST00000370542 ROCK2O75116 1388 aaKnown RBP21.08■□□□□ 0.96
LMO4-201ENST00000370542 TRIM37O94972 964 aa21.07■□□□□ 0.96
LMO4-201ENST00000370542 GCP02774 474 aa21.07■□□□□ 0.96
LMO4-201ENST00000370542 CLSPNQ9HAW4 1339 aa21.06■□□□□ 0.96
LMO4-201ENST00000370542 APBA3O96018 575 aa21.06■□□□□ 0.96
LMO4-201ENST00000370542 BARGINQ6ZT62 677 aa21.06■□□□□ 0.96
LMO4-201ENST00000370542 SBNO2Q9Y2G9 1366 aa21.06■□□□□ 0.96
LMO4-201ENST00000370542 ZNF316A6NFI3 1004 aaPredicted RBP21.05■□□□□ 0.96
LMO4-201ENST00000370542 NBPF14Q5TI25 921 aa21.05■□□□□ 0.96
LMO4-201ENST00000370542 FAM196AQ6ZSG2 479 aa21.05■□□□□ 0.96
LMO4-201ENST00000370542 SLIT3O75094 1523 aa21.04■□□□□ 0.96
LMO4-201ENST00000370542 ZNF692Q9BU19 519 aaPredicted RBP21.03■□□□□ 0.96
LMO4-201ENST00000370542 STRN4Q9NRL3 753 aa21.02■□□□□ 0.96
LMO4-201ENST00000370542 CPSF1Q10570 1443 aaKnown RBP21.02■□□□□ 0.96
LMO4-201ENST00000370542 RREB1Q92766 1687 aa21.02■□□□□ 0.95
LMO4-201ENST00000370542 CEP350Q5VT06 3117 aa21.01■□□□□ 0.95
LMO4-201ENST00000370542 AATKQ6ZMQ8 1374 aa21■□□□□ 0.95
LMO4-201ENST00000370542 PIK3C2AO00443 1686 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms