RNA–Protein interactions for RNA: ENST00000370367.3

KHDC3L-201, Transcript of KH domain containing 3 like, subcortical maternal complex member, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KHDC3L, Length 1,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC3L-201ENST00000370367 PAK3O75914 559 aaPredicted RBP29.76■■■□□ 2.35
KHDC3L-201ENST00000370367 CABP2Q9NPB3 220 aa29.76■■■□□ 2.35
KHDC3L-201ENST00000370367 ABCA3Q99758 1704 aa29.76■■■□□ 2.35
KHDC3L-201ENST00000370367 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.76■■■□□ 2.35
KHDC3L-201ENST00000370367 PPIP5K1Q6PFW1 1433 aa29.75■■■□□ 2.35
KHDC3L-201ENST00000370367 BRD4O60885 1362 aaPredicted RBP29.74■■■□□ 2.35
KHDC3L-201ENST00000370367 SBNO2Q9Y2G9 1366 aa29.74■■■□□ 2.35
KHDC3L-201ENST00000370367 GJD4Q96KN9 370 aaPredicted RBP29.73■■■□□ 2.35
KHDC3L-201ENST00000370367 CARD11Q9BXL7 1154 aa29.72■■■□□ 2.35
KHDC3L-201ENST00000370367 PLEKHG5O94827 1062 aa29.69■■■□□ 2.34
KHDC3L-201ENST00000370367 FAM83GA6ND36 823 aa29.68■■■□□ 2.34
KHDC3L-201ENST00000370367 UPF1Q92900 1129 aaKnown RBP eCLIP29.68■■■□□ 2.34
KHDC3L-201ENST00000370367 NWD2Q9ULI1 1742 aa29.68■■■□□ 2.34
KHDC3L-201ENST00000370367 VPS72Q15906 364 aa29.67■■■□□ 2.34
KHDC3L-201ENST00000370367 CABP1Q9NZU7 370 aa29.66■■■□□ 2.34
KHDC3L-201ENST00000370367 CLSPNQ9HAW4 1339 aa29.65■■■□□ 2.34
KHDC3L-201ENST00000370367 CRYBG1Q9Y4K1 1723 aa29.65■■■□□ 2.34
KHDC3L-201ENST00000370367 ATAD2Q6PL18 1390 aa29.64■■■□□ 2.34
KHDC3L-201ENST00000370367 PLCH1Q4KWH8 1693 aa29.63■■■□□ 2.33
KHDC3L-201ENST00000370367 USP6P35125 1406 aa29.62■■■□□ 2.33
KHDC3L-201ENST00000370367 ABTB2Q8N961 1025 aa29.62■■■□□ 2.33
KHDC3L-201ENST00000370367 COL14A1Q05707 1796 aaKnown RBP29.62■■■□□ 2.33
KHDC3L-201ENST00000370367 GLI3P10071 1580 aa29.6■■■□□ 2.33
KHDC3L-201ENST00000370367 PRDM11Q9NQV5 511 aa29.6■■■□□ 2.33
KHDC3L-201ENST00000370367 USP19O94966 1318 aa29.6■■■□□ 2.33
KHDC3L-201ENST00000370367 BTG4Q9NY30 223 aa29.59■■■□□ 2.33
KHDC3L-201ENST00000370367 NLRP13Q86W25 1043 aa29.58■■■□□ 2.33
KHDC3L-201ENST00000370367 ZNF692Q9BU19 519 aaPredicted RBP29.58■■■□□ 2.33
KHDC3L-201ENST00000370367 TIMELESSQ9UNS1 1208 aa29.58■■■□□ 2.33
KHDC3L-201ENST00000370367 SSH2Q76I76 1423 aa29.57■■■□□ 2.32
KHDC3L-201ENST00000370367 KIAA0232Q92628 1395 aa29.57■■■□□ 2.32
KHDC3L-201ENST00000370367 ONECUT3O60422 494 aaPredicted RBP29.56■■■□□ 2.32
KHDC3L-201ENST00000370367 NUTM2GQ5VZR2 741 aa29.56■■■□□ 2.32
KHDC3L-201ENST00000370367 PHRF1Q9P1Y6 1649 aaKnown RBP29.56■■■□□ 2.32
KHDC3L-201ENST00000370367 NRAPQ86VF7 1730 aa29.54■■■□□ 2.32
KHDC3L-201ENST00000370367 CPDO75976 1380 aa29.54■■■□□ 2.32
KHDC3L-201ENST00000370367 SLC24A1O60721 1099 aa29.54■■■□□ 2.32
KHDC3L-201ENST00000370367 PUS7Q96PZ0 661 aaKnown RBP29.54■■■□□ 2.32
KHDC3L-201ENST00000370367 CCDC9Q9Y3X0 531 aaKnown RBP29.54■■■□□ 2.32
KHDC3L-201ENST00000370367 CPSF1Q10570 1443 aaKnown RBP29.52■■■□□ 2.32
KHDC3L-201ENST00000370367 NRKQ7Z2Y5 1582 aa29.52■■■□□ 2.32
KHDC3L-201ENST00000370367 PCGF6Q9BYE7 350 aa29.51■■■□□ 2.31
KHDC3L-201ENST00000370367 GCP02774 474 aa29.49■■■□□ 2.31
KHDC3L-201ENST00000370367 ZC3H6P61129 1189 aaKnown RBP29.49■■■□□ 2.31
KHDC3L-201ENST00000370367 TTC21AQ8NDW8 1320 aa29.48■■■□□ 2.31
KHDC3L-201ENST00000370367 SEPT12Q8IYM1 358 aa29.48■■■□□ 2.31
KHDC3L-201ENST00000370367 SPATA31A5Q5VU36 1347 aa29.47■■■□□ 2.31
KHDC3L-201ENST00000370367 SPATA31A7Q8IWB4 1347 aa29.47■■■□□ 2.31
KHDC3L-201ENST00000370367 NLRP6P59044 892 aa29.47■■■□□ 2.31
KHDC3L-201ENST00000370367 TTC21BQ7Z4L5 1316 aa29.46■■■□□ 2.31
KHDC3L-201ENST00000370367 CHRNA2Q15822 529 aa29.46■■■□□ 2.31
KHDC3L-201ENST00000370367 TESK2Q96S53 571 aa29.46■■■□□ 2.31
KHDC3L-201ENST00000370367 SLIT3O75094 1523 aa29.45■■■□□ 2.3
KHDC3L-201ENST00000370367 KTN1Q86UP2 1357 aaKnown RBP29.44■■■□□ 2.3
KHDC3L-201ENST00000370367 ST20-MTHFSA0A0A6YYL1 179 aa29.44■■■□□ 2.3
KHDC3L-201ENST00000370367 CCDC125Q86Z20 511 aa29.44■■■□□ 2.3
KHDC3L-201ENST00000370367 AKAP12Q02952 1782 aa29.42■■■□□ 2.3
KHDC3L-201ENST00000370367 NINLQ9Y2I6 1382 aa29.41■■■□□ 2.3
KHDC3L-201ENST00000370367 PIK3C2AO00443 1686 aa29.41■■■□□ 2.3
KHDC3L-201ENST00000370367 EP400Q96L91 3159 aa29.4■■■□□ 2.3
KHDC3L-201ENST00000370367 FAM98CQ17RN3 349 aaKnown RBP29.4■■■□□ 2.3
KHDC3L-201ENST00000370367 SPATA31A1Q5TZJ5 1347 aa29.4■■■□□ 2.3
KHDC3L-201ENST00000370367 USP47Q96K76 1375 aa29.39■■■□□ 2.3
KHDC3L-201ENST00000370367 KRT27Q7Z3Y8 459 aa29.39■■■□□ 2.3
KHDC3L-201ENST00000370367 CD163L1Q9NR16 1453 aa29.39■■■□□ 2.3
KHDC3L-201ENST00000370367 LMO7Q8WWI1 1683 aa29.38■■■□□ 2.29
KHDC3L-201ENST00000370367 HDGFL2Q7Z4V5 671 aaPredicted RBP29.38■■■□□ 2.29
KHDC3L-201ENST00000370367 KCNH5Q8NCM2 988 aa29.38■■■□□ 2.29
KHDC3L-201ENST00000370367 TMC1Q8TDI8 760 aa29.38■■■□□ 2.29
KHDC3L-201ENST00000370367 STRN4Q9NRL3 753 aa29.38■■■□□ 2.29
KHDC3L-201ENST00000370367 AATKQ6ZMQ8 1374 aa29.38■■■□□ 2.29
KHDC3L-201ENST00000370367 CAMTA1Q9Y6Y1 1673 aa29.37■■■□□ 2.29
KHDC3L-201ENST00000370367 TERF2IPQ9NYB0 399 aa29.37■■■□□ 2.29
KHDC3L-201ENST00000370367 EVA1CP58658 441 aa29.36■■■□□ 2.29
KHDC3L-201ENST00000370367 MON2Q7Z3U7 1717 aa29.36■■■□□ 2.29
KHDC3L-201ENST00000370367 A0A0G2JS52 829 aa29.35■■■□□ 2.29
KHDC3L-201ENST00000370367 MYT1Q01538 1121 aa29.35■■■□□ 2.29
KHDC3L-201ENST00000370367 SLC12A5Q9H2X9 1139 aa29.35■■■□□ 2.29
KHDC3L-201ENST00000370367 USP31Q70CQ4 1352 aa29.35■■■□□ 2.29
KHDC3L-201ENST00000370367 BLMP54132 1417 aaPredicted RBP29.33■■■□□ 2.29
KHDC3L-201ENST00000370367 EDC4Q6P2E9 1401 aaKnown RBP29.33■■■□□ 2.29
KHDC3L-201ENST00000370367 THSD7AQ9UPZ6 1657 aa29.32■■■□□ 2.28
KHDC3L-201ENST00000370367 COL5A2P05997 1499 aaPredicted RBP29.32■■■□□ 2.28
KHDC3L-201ENST00000370367 BARGINQ6ZT62 677 aa29.32■■■□□ 2.28
KHDC3L-201ENST00000370367 BRWD3Q6RI45 1802 aa29.31■■■□□ 2.28
KHDC3L-201ENST00000370367 A0A1W2PP64 1363 aa29.31■■■□□ 2.28
KHDC3L-201ENST00000370367 TMF1P82094 1093 aa29.31■■■□□ 2.28
KHDC3L-201ENST00000370367 ARHGEF25Q86VW2 580 aa29.3■■■□□ 2.28
KHDC3L-201ENST00000370367 THRAP3Q9Y2W1 955 aaKnown RBP29.3■■■□□ 2.28
KHDC3L-201ENST00000370367 LARP1Q6PKG0 1096 aaKnown RBP29.29■■■□□ 2.28
KHDC3L-201ENST00000370367 CCER1Q8TC90 406 aaPredicted RBP29.29■■■□□ 2.28
KHDC3L-201ENST00000370367 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.28■■■□□ 2.28
KHDC3L-201ENST00000370367 CDCA8Q53HL2 280 aa29.27■■■□□ 2.28
KHDC3L-201ENST00000370367 TCP11L2Q8N4U5 519 aa29.27■■■□□ 2.28
KHDC3L-201ENST00000370367 NFAT5O94916 1531 aa29.26■■■□□ 2.27
KHDC3L-201ENST00000370367 USP54Q70EL1 1684 aa29.26■■■□□ 2.27
KHDC3L-201ENST00000370367 CRB1P82279 1406 aa29.25■■■□□ 2.27
KHDC3L-201ENST00000370367 ABCC6O95255 1503 aa29.25■■■□□ 2.27
KHDC3L-201ENST00000370367 ZBTB7CA1YPR0 619 aa29.24■■■□□ 2.27
KHDC3L-201ENST00000370367 NME9Q86XW9 330 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms