RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 FAM83GA6ND36 823 aa23.24■■□□□ 1.31
VMA21-202ENST00000370361 PAK3O75914 559 aaPredicted RBP23.24■■□□□ 1.31
VMA21-202ENST00000370361 BRD4O60885 1362 aaPredicted RBP23.24■■□□□ 1.31
VMA21-202ENST00000370361 NRAPQ86VF7 1730 aa23.22■■□□□ 1.31
VMA21-202ENST00000370361 NBPF1Q3BBV0 1214 aa23.22■■□□□ 1.31
VMA21-202ENST00000370361 EP400Q96L91 3159 aa23.22■■□□□ 1.31
VMA21-202ENST00000370361 L3MBTL2Q969R5 705 aa23.21■■□□□ 1.31
VMA21-202ENST00000370361 CCDC9Q9Y3X0 531 aaKnown RBP23.21■■□□□ 1.31
VMA21-202ENST00000370361 BLMP54132 1417 aaPredicted RBP23.19■■□□□ 1.3
VMA21-202ENST00000370361 ACEP12821 1306 aa23.19■■□□□ 1.3
VMA21-202ENST00000370361 SEPT12Q8IYM1 358 aa23.19■■□□□ 1.3
VMA21-202ENST00000370361 BTG4Q9NY30 223 aa23.19■■□□□ 1.3
VMA21-202ENST00000370361 QRICH2Q9H0J4 1663 aa23.19■■□□□ 1.3
VMA21-202ENST00000370361 PLEKHG5O94827 1062 aa23.18■■□□□ 1.3
VMA21-202ENST00000370361 NBPF8Q3BBV2 869 aa23.18■■□□□ 1.3
VMA21-202ENST00000370361 PRDM11Q9NQV5 511 aa23.18■■□□□ 1.3
VMA21-202ENST00000370361 SRPK2P78362 688 aaKnown RBP23.17■■□□□ 1.3
VMA21-202ENST00000370361 TRPM1Q7Z4N2 1603 aa23.17■■□□□ 1.3
VMA21-202ENST00000370361 PHRF1Q9P1Y6 1649 aaKnown RBP23.17■■□□□ 1.3
VMA21-202ENST00000370361 BRWD3Q6RI45 1802 aa23.16■■□□□ 1.3
VMA21-202ENST00000370361 PPIP5K1Q6PFW1 1433 aa23.15■■□□□ 1.3
VMA21-202ENST00000370361 KRT27Q7Z3Y8 459 aa23.14■■□□□ 1.29
VMA21-202ENST00000370361 SF3B2Q13435 895 aaKnown RBP23.13■■□□□ 1.29
VMA21-202ENST00000370361 ROCK2O75116 1388 aaKnown RBP23.13■■□□□ 1.29
VMA21-202ENST00000370361 EVC2Q86UK5 1308 aa23.12■■□□□ 1.29
VMA21-202ENST00000370361 ZRANB1Q9UGI0 708 aa23.12■■□□□ 1.29
VMA21-202ENST00000370361 KIAA0232Q92628 1395 aa23.12■■□□□ 1.29
VMA21-202ENST00000370361 SPATA31A5Q5VU36 1347 aa23.11■■□□□ 1.29
VMA21-202ENST00000370361 SPATA31A7Q8IWB4 1347 aa23.11■■□□□ 1.29
VMA21-202ENST00000370361 ABTB2Q8N961 1025 aa23.11■■□□□ 1.29
VMA21-202ENST00000370361 NLRP13Q86W25 1043 aa23.1■■□□□ 1.29
VMA21-202ENST00000370361 CPDO75976 1380 aa23.1■■□□□ 1.29
VMA21-202ENST00000370361 USP19O94966 1318 aa23.09■■□□□ 1.29
VMA21-202ENST00000370361 SIN3AQ96ST3 1273 aa23.09■■□□□ 1.29
VMA21-202ENST00000370361 NRKQ7Z2Y5 1582 aa23.09■■□□□ 1.29
VMA21-202ENST00000370361 A0A0G2JS52 829 aa23.08■■□□□ 1.29
VMA21-202ENST00000370361 MYT1Q01538 1121 aa23.08■■□□□ 1.29
VMA21-202ENST00000370361 NEUROD1Q13562 356 aa23.08■■□□□ 1.29
VMA21-202ENST00000370361 FAM98CQ17RN3 349 aaKnown RBP23.08■■□□□ 1.29
VMA21-202ENST00000370361 CABP2Q9NPB3 220 aa23.08■■□□□ 1.29
VMA21-202ENST00000370361 THSD7AQ9UPZ6 1657 aa23.06■■□□□ 1.28
VMA21-202ENST00000370361 USP6P35125 1406 aa23.06■■□□□ 1.28
VMA21-202ENST00000370361 SPATA31A1Q5TZJ5 1347 aa23.05■■□□□ 1.28
VMA21-202ENST00000370361 SBNO2Q9Y2G9 1366 aa23.04■■□□□ 1.28
VMA21-202ENST00000370361 ZC3H6P61129 1189 aaKnown RBP23.04■■□□□ 1.28
VMA21-202ENST00000370361 ZNF692Q9BU19 519 aaPredicted RBP23.04■■□□□ 1.28
VMA21-202ENST00000370361 CABP1Q9NZU7 370 aa23.03■■□□□ 1.28
VMA21-202ENST00000370361 NUTM2GQ5VZR2 741 aa23.02■■□□□ 1.28
VMA21-202ENST00000370361 LMO7Q8WWI1 1683 aa23.02■■□□□ 1.28
VMA21-202ENST00000370361 SSH2Q76I76 1423 aa23.01■■□□□ 1.27
VMA21-202ENST00000370361 GCP02774 474 aa23.01■■□□□ 1.27
VMA21-202ENST00000370361 EVA1CP58658 441 aa23.01■■□□□ 1.27
VMA21-202ENST00000370361 CHRNA2Q15822 529 aa23.01■■□□□ 1.27
VMA21-202ENST00000370361 BARGINQ6ZT62 677 aa23.01■■□□□ 1.27
VMA21-202ENST00000370361 BAG6P46379 1132 aa23■■□□□ 1.27
VMA21-202ENST00000370361 RGPD1P0DJD0 1748 aa22.99■■□□□ 1.27
VMA21-202ENST00000370361 STRN4Q9NRL3 753 aa22.99■■□□□ 1.27
VMA21-202ENST00000370361 THRAP3Q9Y2W1 955 aaKnown RBP22.99■■□□□ 1.27
VMA21-202ENST00000370361 TONSLQ96HA7 1378 aa22.99■■□□□ 1.27
VMA21-202ENST00000370361 SLIT3O75094 1523 aa22.98■■□□□ 1.27
VMA21-202ENST00000370361 CAMTA1Q9Y6Y1 1673 aa22.97■■□□□ 1.27
VMA21-202ENST00000370361 TTC21AQ8NDW8 1320 aa22.97■■□□□ 1.27
VMA21-202ENST00000370361 NLRP6P59044 892 aa22.96■■□□□ 1.27
VMA21-202ENST00000370361 DISP2A7MBM2 1401 aa22.96■■□□□ 1.27
VMA21-202ENST00000370361 AKAP12Q02952 1782 aa22.96■■□□□ 1.27
VMA21-202ENST00000370361 C11orf95C9JLR9 678 aaPredicted RBP22.95■■□□□ 1.26
VMA21-202ENST00000370361 AATKQ6ZMQ8 1374 aa22.95■■□□□ 1.26
VMA21-202ENST00000370361 TCP11L2Q8N4U5 519 aa22.95■■□□□ 1.26
VMA21-202ENST00000370361 COL5A2P05997 1499 aaPredicted RBP22.94■■□□□ 1.26
VMA21-202ENST00000370361 FAM196AQ6ZSG2 479 aa22.94■■□□□ 1.26
VMA21-202ENST00000370361 DEFB132Q7Z7B7 95 aa22.94■■□□□ 1.26
VMA21-202ENST00000370361 CARD11Q9BXL7 1154 aa22.94■■□□□ 1.26
VMA21-202ENST00000370361 PIK3C2AO00443 1686 aa22.93■■□□□ 1.26
VMA21-202ENST00000370361 CPSF1Q10570 1443 aaKnown RBP22.93■■□□□ 1.26
VMA21-202ENST00000370361 SLC24A1O60721 1099 aa22.93■■□□□ 1.26
VMA21-202ENST00000370361 KCNH5Q8NCM2 988 aa22.93■■□□□ 1.26
VMA21-202ENST00000370361 CRB1P82279 1406 aa22.91■■□□□ 1.26
VMA21-202ENST00000370361 TTC21BQ7Z4L5 1316 aa22.91■■□□□ 1.26
VMA21-202ENST00000370361 PUS7Q96PZ0 661 aaKnown RBP22.91■■□□□ 1.26
VMA21-202ENST00000370361 TRIM26Q12899 539 aaPredicted RBP22.9■■□□□ 1.26
VMA21-202ENST00000370361 PDE3BQ13370 1112 aa22.9■■□□□ 1.26
VMA21-202ENST00000370361 LARP1Q6PKG0 1096 aaKnown RBP22.9■■□□□ 1.26
VMA21-202ENST00000370361 ABCC6O95255 1503 aa22.89■■□□□ 1.26
VMA21-202ENST00000370361 KTN1Q86UP2 1357 aaKnown RBP22.89■■□□□ 1.25
VMA21-202ENST00000370361 PARD3Q8TEW0 1356 aa22.89■■□□□ 1.25
VMA21-202ENST00000370361 USP35Q9P2H5 1018 aa22.88■■□□□ 1.25
VMA21-202ENST00000370361 MON2Q7Z3U7 1717 aa22.88■■□□□ 1.25
VMA21-202ENST00000370361 TNS1Q9HBL0 1735 aaKnown RBP22.88■■□□□ 1.25
VMA21-202ENST00000370361 PARP4Q9UKK3 1724 aaKnown RBP22.88■■□□□ 1.25
VMA21-202ENST00000370361 SRCAPQ6ZRS2 3230 aa22.85■■□□□ 1.25
VMA21-202ENST00000370361 NINLQ9Y2I6 1382 aa22.85■■□□□ 1.25
VMA21-202ENST00000370361 USP54Q70EL1 1684 aa22.84■■□□□ 1.25
VMA21-202ENST00000370361 COL18A1P39060 1754 aa22.84■■□□□ 1.25
VMA21-202ENST00000370361 ARHGEF25Q86VW2 580 aa22.84■■□□□ 1.25
VMA21-202ENST00000370361 CDCA7Q9BWT1 371 aaPredicted RBP22.84■■□□□ 1.25
VMA21-202ENST00000370361 HDGFL2Q7Z4V5 671 aaPredicted RBP22.83■■□□□ 1.25
VMA21-202ENST00000370361 WDR17Q8IZU2 1322 aa22.82■■□□□ 1.24
VMA21-202ENST00000370361 USP31Q70CQ4 1352 aa22.82■■□□□ 1.24
VMA21-202ENST00000370361 FAM182BQ5T319 152 aa22.82■■□□□ 1.24
VMA21-202ENST00000370361 EN1Q05925 392 aaPredicted RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms