RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 WDR63Q8IWG1 891 aa12.79□□□□□ -0.36
PRPF38B-201ENST00000370021 DRC7Q8IY82 874 aa12.79□□□□□ -0.36
PRPF38B-201ENST00000370021 C16orf71Q8IYS4 520 aaPredicted RBP12.79□□□□□ -0.36
PRPF38B-201ENST00000370021 ZGPATQ8N5A5 531 aaKnown RBP12.79□□□□□ -0.36
PRPF38B-201ENST00000370021 RAB3GAP1Q15042 981 aa12.79□□□□□ -0.36
PRPF38B-201ENST00000370021 TRMT2AQ8IZ69 625 aaKnown RBP12.78□□□□□ -0.36
PRPF38B-201ENST00000370021 C17orf53Q8N3J3 647 aaPredicted RBP12.78□□□□□ -0.36
PRPF38B-201ENST00000370021 STAG3Q9UJ98 1225 aa12.78□□□□□ -0.36
PRPF38B-201ENST00000370021 NUCB2P80303 420 aa12.78□□□□□ -0.36
PRPF38B-201ENST00000370021 LARP6Q9BRS8 491 aaKnown RBP12.78□□□□□ -0.36
PRPF38B-201ENST00000370021 CARMIL2Q6F5E8 1435 aa12.78□□□□□ -0.36
PRPF38B-201ENST00000370021 MAGI2Q86UL8 1455 aa12.78□□□□□ -0.36
PRPF38B-201ENST00000370021 CDC45O75419 566 aa12.78□□□□□ -0.36
PRPF38B-201ENST00000370021 OFD1O75665 1012 aa12.78□□□□□ -0.36
PRPF38B-201ENST00000370021 KIF16BQ96L93 1317 aa12.77□□□□□ -0.36
PRPF38B-201ENST00000370021 SPC24Q8NBT2 197 aa12.77□□□□□ -0.37
PRPF38B-201ENST00000370021 ISY1Q9ULR0 285 aaKnown RBP12.77□□□□□ -0.37
PRPF38B-201ENST00000370021 SPAG9O60271 1321 aaKnown RBP12.77□□□□□ -0.37
PRPF38B-201ENST00000370021 TMPOP42166 694 aaKnown RBP12.77□□□□□ -0.37
PRPF38B-201ENST00000370021 ADGRF5Q8IZF2 1346 aa12.77□□□□□ -0.37
PRPF38B-201ENST00000370021 MINK1Q8N4C8 1332 aaPredicted RBP12.77□□□□□ -0.37
PRPF38B-201ENST00000370021 GPRASP1Q5JY77 1395 aa12.77□□□□□ -0.37
PRPF38B-201ENST00000370021 SHROOM2Q13796 1616 aa12.76□□□□□ -0.37
PRPF38B-201ENST00000370021 CCDC27Q2M243 656 aa12.76□□□□□ -0.37
PRPF38B-201ENST00000370021 CIZ1Q9ULV3 898 aaPredicted RBP12.76□□□□□ -0.37
PRPF38B-201ENST00000370021 TSHZ3Q63HK5 1081 aa12.76□□□□□ -0.37
PRPF38B-201ENST00000370021 NSD3Q9BZ95 1437 aa12.76□□□□□ -0.37
PRPF38B-201ENST00000370021 NGEFQ8N5V2 710 aa12.76□□□□□ -0.37
PRPF38B-201ENST00000370021 NECTIN2Q92692 538 aa12.76□□□□□ -0.37
PRPF38B-201ENST00000370021 FAM135AQ9P2D6 1515 aa12.75□□□□□ -0.37
PRPF38B-201ENST00000370021 CHAF1AQ13111 956 aaPredicted RBP12.75□□□□□ -0.37
PRPF38B-201ENST00000370021 KLHL40Q2TBA0 621 aa12.75□□□□□ -0.37
PRPF38B-201ENST00000370021 ANO2Q9NQ90 1003 aa12.75□□□□□ -0.37
PRPF38B-201ENST00000370021 IQGAP3Q86VI3 1631 aa12.75□□□□□ -0.37
PRPF38B-201ENST00000370021 EFCAB2Q5VUJ9 269 aa12.75□□□□□ -0.37
PRPF38B-201ENST00000370021 COL17A1Q9UMD9 1497 aaPredicted RBP12.75□□□□□ -0.37
PRPF38B-201ENST00000370021 PLXNC1O60486 1568 aa12.75□□□□□ -0.37
PRPF38B-201ENST00000370021 RSPH4AQ5TD94 716 aa12.74□□□□□ -0.37
PRPF38B-201ENST00000370021 SMC5Q8IY18 1101 aa12.74□□□□□ -0.37
PRPF38B-201ENST00000370021 UPF3BQ9BZI7 483 aaKnown RBP12.74□□□□□ -0.37
PRPF38B-201ENST00000370021 PRKAR2BP31323 418 aa12.74□□□□□ -0.37
PRPF38B-201ENST00000370021 CSPP1Q1MSJ5 1256 aa12.74□□□□□ -0.37
PRPF38B-201ENST00000370021 ZNF592Q92610 1267 aa12.74□□□□□ -0.37
PRPF38B-201ENST00000370021 CCDC39Q9UFE4 941 aa12.74□□□□□ -0.37
PRPF38B-201ENST00000370021 RNF17Q9BXT8 1623 aaKnown RBP12.74□□□□□ -0.37
PRPF38B-201ENST00000370021 TTC37Q6PGP7 1564 aa12.74□□□□□ -0.37
PRPF38B-201ENST00000370021 AAMPQ13685 434 aa12.74□□□□□ -0.37
PRPF38B-201ENST00000370021 ATAD2Q6PL18 1390 aa12.73□□□□□ -0.37
PRPF38B-201ENST00000370021 DCTN1Q14203 1278 aa12.73□□□□□ -0.37
PRPF38B-201ENST00000370021 TTC12Q9H892 705 aaPredicted RBP12.73□□□□□ -0.37
PRPF38B-201ENST00000370021 USP25Q9UHP3 1055 aa12.73□□□□□ -0.37
PRPF38B-201ENST00000370021 DIAPH1O60610 1272 aaKnown RBP12.73□□□□□ -0.37
PRPF38B-201ENST00000370021 NUCB1Q02818 461 aa12.73□□□□□ -0.37
PRPF38B-201ENST00000370021 ZNF771Q7L3S4 317 aaPredicted RBP12.73□□□□□ -0.37
PRPF38B-201ENST00000370021 PRDM15P57071 1507 aaPredicted RBP12.72□□□□□ -0.37
PRPF38B-201ENST00000370021 A2MP01023 1474 aa12.72□□□□□ -0.37
PRPF38B-201ENST00000370021 OTUD7AQ8TE49 926 aaPredicted RBP12.72□□□□□ -0.37
PRPF38B-201ENST00000370021 CHD1O14646 1710 aa12.72□□□□□ -0.37
PRPF38B-201ENST00000370021 PLA2R1Q13018 1463 aa12.72□□□□□ -0.37
PRPF38B-201ENST00000370021 NUTM2FA1L443 756 aa12.72□□□□□ -0.37
PRPF38B-201ENST00000370021 CDK11BP21127 795 aaKnown RBP12.72□□□□□ -0.37
PRPF38B-201ENST00000370021 RABEP1Q15276 862 aa12.72□□□□□ -0.37
PRPF38B-201ENST00000370021 MAP7D2Q96T17 732 aa12.72□□□□□ -0.37
PRPF38B-201ENST00000370021 NPHP1O15259 732 aa12.71□□□□□ -0.37
PRPF38B-201ENST00000370021 INTS3Q68E01 1043 aaKnown RBP12.71□□□□□ -0.37
PRPF38B-201ENST00000370021 NINLQ9Y2I6 1382 aa12.71□□□□□ -0.37
PRPF38B-201ENST00000370021 SYAP1Q96A49 352 aaPredicted RBP12.71□□□□□ -0.37
PRPF38B-201ENST00000370021 HDAC1Q13547 482 aaPredicted RBP12.71□□□□□ -0.38
PRPF38B-201ENST00000370021 CHMP4BQ9H444 224 aaKnown RBP12.71□□□□□ -0.38
PRPF38B-201ENST00000370021 TSPY26PQ9H489 355 aa12.71□□□□□ -0.38
PRPF38B-201ENST00000370021 ZBTB40Q9NUA8 1239 aa12.71□□□□□ -0.38
PRPF38B-201ENST00000370021 FIBPO43427 364 aa12.7□□□□□ -0.38
PRPF38B-201ENST00000370021 CCDC141Q6ZP82 1450 aa12.7□□□□□ -0.38
PRPF38B-201ENST00000370021 BMP2KLQ5H9B9 411 aa12.7□□□□□ -0.38
PRPF38B-201ENST00000370021 ZNF428Q96B54 188 aa12.7□□□□□ -0.38
PRPF38B-201ENST00000370021 PPP4R3BQ5MIZ7 849 aa12.7□□□□□ -0.38
PRPF38B-201ENST00000370021 PLPPR3Q6T4P5 718 aa12.7□□□□□ -0.38
PRPF38B-201ENST00000370021 TSPYL6Q8N831 410 aa12.7□□□□□ -0.38
PRPF38B-201ENST00000370021 SNX21Q969T3 373 aa12.7□□□□□ -0.38
PRPF38B-201ENST00000370021 ZKSCAN5Q9Y2L8 839 aa12.69□□□□□ -0.38
PRPF38B-201ENST00000370021 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.69□□□□□ -0.38
PRPF38B-201ENST00000370021 MAP4K4O95819 1239 aaPredicted RBP12.69□□□□□ -0.38
PRPF38B-201ENST00000370021 DDX54Q8TDD1 881 aaKnown RBP12.69□□□□□ -0.38
PRPF38B-201ENST00000370021 ASXL1Q8IXJ9 1541 aa12.69□□□□□ -0.38
PRPF38B-201ENST00000370021 MCCP23508 829 aa12.69□□□□□ -0.38
PRPF38B-201ENST00000370021 RBM25P49756 843 aaKnown RBP12.69□□□□□ -0.38
PRPF38B-201ENST00000370021 SASS6Q6UVJ0 657 aa12.69□□□□□ -0.38
PRPF38B-201ENST00000370021 KANK1Q14678 1352 aa12.68□□□□□ -0.38
PRPF38B-201ENST00000370021 NSFL1CQ9UNZ2 370 aaKnown RBP12.68□□□□□ -0.38
PRPF38B-201ENST00000370021 REC8O95072 547 aa12.68□□□□□ -0.38
PRPF38B-201ENST00000370021 TWISTNBQ3B726 338 aaPredicted RBP12.68□□□□□ -0.38
PRPF38B-201ENST00000370021 GCC1Q96CN9 775 aa12.68□□□□□ -0.38
PRPF38B-201ENST00000370021 ZNF692Q9BU19 519 aaPredicted RBP12.68□□□□□ -0.38
PRPF38B-201ENST00000370021 TMEM63CQ9P1W3 806 aa12.68□□□□□ -0.38
PRPF38B-201ENST00000370021 SYCP2Q9BX26 1530 aa12.68□□□□□ -0.38
PRPF38B-201ENST00000370021 GOLGA6L4A6NEF3 574 aa12.67□□□□□ -0.38
PRPF38B-201ENST00000370021 KCNJ4P48050 445 aa12.67□□□□□ -0.38
PRPF38B-201ENST00000370021 FBXW7Q969H0 707 aa12.67□□□□□ -0.38
PRPF38B-201ENST00000370021 ATP10AO60312 1499 aa12.67□□□□□ -0.38
PRPF38B-201ENST00000370021 FAM83GA6ND36 823 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms