RNA–Protein interactions for RNA: ENST00000369797.7

PDCD11-201, Transcript of programmed cell death 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD11, Length 6,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-201ENST00000369797 CEBPZQ03701 1054 aaKnown RBP13.52□□□□□ -0.24
PDCD11-201ENST00000369797 SKIDA1Q1XH10 827 aa13.52□□□□□ -0.24
PDCD11-201ENST00000369797 TCP11L2Q8N4U5 519 aa13.52□□□□□ -0.24
PDCD11-201ENST00000369797 FMNL2Q96PY5 1086 aa13.52□□□□□ -0.24
PDCD11-201ENST00000369797 SMG6Q86US8 1419 aaKnown RBP13.52□□□□□ -0.25
PDCD11-201ENST00000369797 ADAMTS8Q9UP79 889 aa13.52□□□□□ -0.25
PDCD11-201ENST00000369797 PRDM2Q13029 1718 aa13.52□□□□□ -0.25
PDCD11-201ENST00000369797 CCDC173Q0VFZ6 552 aa13.52□□□□□ -0.25
PDCD11-201ENST00000369797 NAT10Q9H0A0 1025 aaKnown RBP13.52□□□□□ -0.25
PDCD11-201ENST00000369797 AK7Q96M32 723 aa13.51□□□□□ -0.25
PDCD11-201ENST00000369797 KIF7Q2M1P5 1343 aa13.51□□□□□ -0.25
PDCD11-201ENST00000369797 RNF214Q8ND24 703 aa13.51□□□□□ -0.25
PDCD11-201ENST00000369797 RUSC2Q8N2Y8 1516 aa13.51□□□□□ -0.25
PDCD11-201ENST00000369797 CDR1P51861 262 aa13.51□□□□□ -0.25
PDCD11-201ENST00000369797 HDGFL1Q5TGJ6 251 aa13.51□□□□□ -0.25
PDCD11-201ENST00000369797 ZHX3Q9H4I2 956 aa13.51□□□□□ -0.25
PDCD11-201ENST00000369797 TWISTNBQ3B726 338 aaPredicted RBP13.5□□□□□ -0.25
PDCD11-201ENST00000369797 ATAD2BQ9ULI0 1458 aa13.5□□□□□ -0.25
PDCD11-201ENST00000369797 EXOSC9Q06265 439 aaKnown RBP13.5□□□□□ -0.25
PDCD11-201ENST00000369797 FAM13BQ9NYF5 915 aa13.5□□□□□ -0.25
PDCD11-201ENST00000369797 SULT6B1Q6IMI4 303 aa13.5□□□□□ -0.25
PDCD11-201ENST00000369797 BICDL1Q6ZP65 573 aa13.5□□□□□ -0.25
PDCD11-201ENST00000369797 GAPVD1Q14C86 1478 aa13.5□□□□□ -0.25
PDCD11-201ENST00000369797 IBSPP21815 317 aaPredicted RBP13.49□□□□□ -0.25
PDCD11-201ENST00000369797 TEX35Q5T0J7 233 aa13.49□□□□□ -0.25
PDCD11-201ENST00000369797 ZNF530Q6P9A1 599 aaPredicted RBP13.49□□□□□ -0.25
PDCD11-201ENST00000369797 SLC4A2P04920 1241 aa13.49□□□□□ -0.25
PDCD11-201ENST00000369797 TXLNAP40222 546 aa13.49□□□□□ -0.25
PDCD11-201ENST00000369797 XPCQ01831 940 aaPredicted RBP13.49□□□□□ -0.25
PDCD11-201ENST00000369797 ZSCAN29Q8IWY8 852 aaPredicted RBP13.49□□□□□ -0.25
PDCD11-201ENST00000369797 MPHOSPH8Q99549 860 aa13.49□□□□□ -0.25
PDCD11-201ENST00000369797 NEK4P51957 841 aa13.49□□□□□ -0.25
PDCD11-201ENST00000369797 SYCP1Q15431 976 aa13.49□□□□□ -0.25
PDCD11-201ENST00000369797 SMC2O95347 1197 aa13.49□□□□□ -0.25
PDCD11-201ENST00000369797 MAP4K4O95819 1239 aaPredicted RBP13.49□□□□□ -0.25
PDCD11-201ENST00000369797 STK3Q13188 491 aa13.48□□□□□ -0.25
PDCD11-201ENST00000369797 MAGEC2Q9UBF1 373 aaPredicted RBP13.48□□□□□ -0.25
PDCD11-201ENST00000369797 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.48□□□□□ -0.253e-6■■■□□ 18.9
PDCD11-201ENST00000369797 GNAI2P04899 355 aa13.48□□□□□ -0.25
PDCD11-201ENST00000369797 KINO60870 393 aaKnown RBP13.47□□□□□ -0.25
PDCD11-201ENST00000369797 PRDM11Q9NQV5 511 aa13.47□□□□□ -0.25
PDCD11-201ENST00000369797 THEMISQ8N1K5 641 aaPredicted RBP13.47□□□□□ -0.25
PDCD11-201ENST00000369797 NUP133Q8WUM0 1156 aa13.47□□□□□ -0.25
PDCD11-201ENST00000369797 TSR2Q969E8 191 aaKnown RBP13.47□□□□□ -0.25
PDCD11-201ENST00000369797 PDCL3Q9H2J4 239 aa13.47□□□□□ -0.25
PDCD11-201ENST00000369797 RAD54L2Q9Y4B4 1467 aa13.47□□□□□ -0.25
PDCD11-201ENST00000369797 ERC1Q8IUD2 1116 aa13.47□□□□□ -0.25
PDCD11-201ENST00000369797 ARHGAP5Q13017 1502 aa13.47□□□□□ -0.25
PDCD11-201ENST00000369797 STK38Q15208 465 aa13.47□□□□□ -0.25
PDCD11-201ENST00000369797 SLC26A8Q96RN1 970 aa13.47□□□□□ -0.25
PDCD11-201ENST00000369797 CDK19Q9BWU1 502 aa13.47□□□□□ -0.25
PDCD11-201ENST00000369797 SPINK5Q9NQ38 1064 aaPredicted RBP13.47□□□□□ -0.25
PDCD11-201ENST00000369797 CCDC7Q96M83 1385 aa13.47□□□□□ -0.25
PDCD11-201ENST00000369797 RDXP35241 583 aaKnown RBP13.46□□□□□ -0.25
PDCD11-201ENST00000369797 SPG7Q9UQ90 795 aa13.46□□□□□ -0.25
PDCD11-201ENST00000369797 CNTLNQ9NXG0 1405 aa13.46□□□□□ -0.25
PDCD11-201ENST00000369797 HIP1O00291 1037 aa13.46□□□□□ -0.25
PDCD11-201ENST00000369797 TRIM5Q9C035 493 aa13.46□□□□□ -0.25
PDCD11-201ENST00000369797 CABP1Q9NZU7 370 aa13.46□□□□□ -0.25
PDCD11-201ENST00000369797 ANKRD50Q9ULJ7 1429 aa13.46□□□□□ -0.25
PDCD11-201ENST00000369797 FKBP4Q02790 459 aaKnown RBP eCLIP13.46□□□□□ -0.25
PDCD11-201ENST00000369797 CCDC85AQ96PX6 553 aaPredicted RBP13.46□□□□□ -0.25
PDCD11-201ENST00000369797 ARGLU1Q9NWB6 273 aaPredicted RBP13.46□□□□□ -0.25
PDCD11-201ENST00000369797 CCDC57Q2TAC2 916 aa13.45□□□□□ -0.26
PDCD11-201ENST00000369797 HSP90B2PQ58FF3 399 aa13.45□□□□□ -0.26
PDCD11-201ENST00000369797 STAC3Q96MF2 364 aa13.45□□□□□ -0.26
PDCD11-201ENST00000369797 NACAP1Q9BZK3 213 aa13.45□□□□□ -0.26
PDCD11-201ENST00000369797 NOB1Q9ULX3 412 aaKnown RBP13.45□□□□□ -0.26
PDCD11-201ENST00000369797 CDCA7LQ96GN5 454 aa13.45□□□□□ -0.26
PDCD11-201ENST00000369797 FILIP1LQ4L180 1135 aa13.45□□□□□ -0.26
PDCD11-201ENST00000369797 ACBD3Q9H3P7 528 aa13.45□□□□□ -0.26
PDCD11-201ENST00000369797 FIBPO43427 364 aa13.45□□□□□ -0.26
PDCD11-201ENST00000369797 AQRO60306 1485 aaKnown RBP eCLIP13.45□□□□□ -0.263e-7■■■■□ 25.9
PDCD11-201ENST00000369797 CCDC69A6NI79 296 aa13.44□□□□□ -0.26
PDCD11-201ENST00000369797 SLC12A5Q9H2X9 1139 aa13.44□□□□□ -0.26
PDCD11-201ENST00000369797 SOGA3Q5TF21 947 aa13.44□□□□□ -0.26
PDCD11-201ENST00000369797 RSPH6AQ9H0K4 717 aa13.44□□□□□ -0.26
PDCD11-201ENST00000369797 PIBF1Q8WXW3 757 aa13.44□□□□□ -0.26
PDCD11-201ENST00000369797 MPHOSPH10O00566 681 aaKnown RBP13.43□□□□□ -0.26
PDCD11-201ENST00000369797 PPP2R1AP30153 589 aa13.43□□□□□ -0.26
PDCD11-201ENST00000369797 CAVIN1Q6NZI2 390 aaKnown RBP13.43□□□□□ -0.26
PDCD11-201ENST00000369797 ZNF396Q96N95 335 aaPredicted RBP13.43□□□□□ -0.26
PDCD11-201ENST00000369797 ZC3H6P61129 1189 aaKnown RBP13.43□□□□□ -0.26
PDCD11-201ENST00000369797 TRIM22Q8IYM9 498 aa13.43□□□□□ -0.26
PDCD11-201ENST00000369797 TANGO6Q9C0B7 1094 aa13.43□□□□□ -0.26
PDCD11-201ENST00000369797 SRCIN1Q9C0H9 1055 aa13.43□□□□□ -0.26
PDCD11-201ENST00000369797 FGD5Q6ZNL6 1462 aa13.42□□□□□ -0.26
PDCD11-201ENST00000369797 SSBP05455 408 aaKnown RBP eCLIP13.42□□□□□ -0.26
PDCD11-201ENST00000369797 SMARCE1Q969G3 411 aa13.42□□□□□ -0.26
PDCD11-201ENST00000369797 RAI14Q9P0K7 980 aa13.42□□□□□ -0.26
PDCD11-201ENST00000369797 PDZRN3Q9UPQ7 1066 aa13.42□□□□□ -0.26
PDCD11-201ENST00000369797 PRPF40AO75400 957 aaKnown RBP13.42□□□□□ -0.26
PDCD11-201ENST00000369797 PDCP20941 246 aa13.41□□□□□ -0.26
PDCD11-201ENST00000369797 ANKLE2Q86XL3 938 aa13.41□□□□□ -0.26
PDCD11-201ENST00000369797 FGD6Q6ZV73 1430 aa13.41□□□□□ -0.26
PDCD11-201ENST00000369797 RRBP1Q9P2E9 1410 aaKnown RBP13.41□□□□□ -0.26
PDCD11-201ENST00000369797 FYCO1Q9BQS8 1478 aa13.41□□□□□ -0.26
PDCD11-201ENST00000369797 RRS1Q15050 365 aaKnown RBP13.41□□□□□ -0.26
PDCD11-201ENST00000369797 FAM43AQ8N2R8 423 aa13.41□□□□□ -0.26
PDCD11-201ENST00000369797 TDO2P48775 406 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms