RNA–Protein interactions for RNA: ENST00000369774.8

SH3PXD2A-203, Transcript of SH3 and PX domains 2A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SH3PXD2A, Length 11,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-203ENST00000369774 ZHX3Q9H4I2 956 aa15.59■□□□□ 0.09
SH3PXD2A-203ENST00000369774 OSCARQ8IYS5 282 aa15.59■□□□□ 0.09
SH3PXD2A-203ENST00000369774 GNL3LQ9NVN8 582 aaKnown RBP15.59■□□□□ 0.09
SH3PXD2A-203ENST00000369774 CEBPZQ03701 1054 aaKnown RBP15.59■□□□□ 0.09
SH3PXD2A-203ENST00000369774 NASPP49321 788 aaPredicted RBP15.59■□□□□ 0.09
SH3PXD2A-203ENST00000369774 ZNF428Q96B54 188 aa15.59■□□□□ 0.09
SH3PXD2A-203ENST00000369774 GPRASP1Q5JY77 1395 aa15.59■□□□□ 0.09
SH3PXD2A-203ENST00000369774 ESCO1Q5FWF5 840 aa15.59■□□□□ 0.09
SH3PXD2A-203ENST00000369774 ERCC4Q92889 916 aaPredicted RBP15.58■□□□□ 0.08
SH3PXD2A-203ENST00000369774 PLEKHO1Q53GL0 409 aaPredicted RBP15.57■□□□□ 0.08
SH3PXD2A-203ENST00000369774 HIP1O00291 1037 aa15.57■□□□□ 0.08
SH3PXD2A-203ENST00000369774 H0YHG0 523 aa15.57■□□□□ 0.08
SH3PXD2A-203ENST00000369774 PDCL3Q9H2J4 239 aa15.57■□□□□ 0.08
SH3PXD2A-203ENST00000369774 CCDC39Q9UFE4 941 aa15.57■□□□□ 0.08
SH3PXD2A-203ENST00000369774 RBM5P52756 815 aaKnown RBP eCLIP15.57■□□□□ 0.086e-20■■■■■ 37.2
SH3PXD2A-203ENST00000369774 TMEM132EQ6IEE7 984 aa15.57■□□□□ 0.08
SH3PXD2A-203ENST00000369774 CCDC158Q5M9N0 1113 aa15.56■□□□□ 0.08
SH3PXD2A-203ENST00000369774 SMG6Q86US8 1419 aaKnown RBP15.56■□□□□ 0.08
SH3PXD2A-203ENST00000369774 GAS2L2Q8NHY3 880 aa15.56■□□□□ 0.08
SH3PXD2A-203ENST00000369774 TOP2AP11388 1531 aaKnown RBP15.56■□□□□ 0.08
SH3PXD2A-203ENST00000369774 GNAI3P08754 354 aa15.56■□□□□ 0.08
SH3PXD2A-203ENST00000369774 ZNF396Q96N95 335 aaPredicted RBP15.56■□□□□ 0.08
SH3PXD2A-203ENST00000369774 SEPT7Q16181 437 aaKnown RBP15.55■□□□□ 0.08
SH3PXD2A-203ENST00000369774 ZRSR2Q15696 482 aaKnown RBP15.55■□□□□ 0.08
SH3PXD2A-203ENST00000369774 LETM1O95202 739 aaPredicted RBP15.55■□□□□ 0.08
SH3PXD2A-203ENST00000369774 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.55■□□□□ 0.08
SH3PXD2A-203ENST00000369774 ERLIN2O94905 339 aa15.55■□□□□ 0.08
SH3PXD2A-203ENST00000369774 CAVIN1Q6NZI2 390 aaKnown RBP15.55■□□□□ 0.08
SH3PXD2A-203ENST00000369774 ZNHIT6Q9NWK9 470 aaKnown RBP15.55■□□□□ 0.08
SH3PXD2A-203ENST00000369774 PDCP20941 246 aa15.54■□□□□ 0.08
SH3PXD2A-203ENST00000369774 ANKRD62A6NC57 917 aa15.54■□□□□ 0.08
SH3PXD2A-203ENST00000369774 NUTM2BA6NNL0 878 aaPredicted RBP15.54■□□□□ 0.08
SH3PXD2A-203ENST00000369774 NUTM2EB1AL46 878 aaPredicted RBP15.54■□□□□ 0.08
SH3PXD2A-203ENST00000369774 ERC1Q8IUD2 1116 aa15.54■□□□□ 0.08
SH3PXD2A-203ENST00000369774 NUTM2AQ8IVF1 878 aaPredicted RBP15.54■□□□□ 0.08
SH3PXD2A-203ENST00000369774 STK38Q15208 465 aa15.54■□□□□ 0.08
SH3PXD2A-203ENST00000369774 NEK4P51957 841 aa15.54■□□□□ 0.08
SH3PXD2A-203ENST00000369774 MTHFSP49914 203 aa15.53■□□□□ 0.08
SH3PXD2A-203ENST00000369774 C1orf115Q9H7X2 142 aa15.53■□□□□ 0.08
SH3PXD2A-203ENST00000369774 GNAI2P04899 355 aa15.53■□□□□ 0.08
SH3PXD2A-203ENST00000369774 TATP17735 454 aaPredicted RBP15.53■□□□□ 0.08
SH3PXD2A-203ENST00000369774 CADPSQ9ULU8 1353 aa15.52■□□□□ 0.08
SH3PXD2A-203ENST00000369774 STIM1Q13586 685 aa15.52■□□□□ 0.08
SH3PXD2A-203ENST00000369774 CABP4P57796 275 aa15.52■□□□□ 0.08
SH3PXD2A-203ENST00000369774 AXDND1Q5T1B0 1012 aaPredicted RBP15.52■□□□□ 0.08
SH3PXD2A-203ENST00000369774 CNTLNQ9NXG0 1405 aa15.52■□□□□ 0.08
SH3PXD2A-203ENST00000369774 FIBPO43427 364 aa15.52■□□□□ 0.07
SH3PXD2A-203ENST00000369774 SIL1Q9H173 461 aa15.52■□□□□ 0.07
SH3PXD2A-203ENST00000369774 MATR3P43243 847 aaKnown RBP eCLIP15.52■□□□□ 0.071e-6■■□□□ 11.7
SH3PXD2A-203ENST00000369774 TSPY26PQ9H489 355 aa15.52■□□□□ 0.07
SH3PXD2A-203ENST00000369774 DEF6Q9H4E7 631 aa15.52■□□□□ 0.07
SH3PXD2A-203ENST00000369774 CCDC69A6NI79 296 aa15.51■□□□□ 0.07
SH3PXD2A-203ENST00000369774 STK3Q13188 491 aa15.51■□□□□ 0.07
SH3PXD2A-203ENST00000369774 DDX54Q8TDD1 881 aaKnown RBP15.51■□□□□ 0.07
SH3PXD2A-203ENST00000369774 SPC24Q8NBT2 197 aa15.51■□□□□ 0.07
SH3PXD2A-203ENST00000369774 CWC15Q9P013 229 aaKnown RBP15.51■□□□□ 0.07
SH3PXD2A-203ENST00000369774 TSPYL1Q9H0U9 437 aa15.51■□□□□ 0.07
SH3PXD2A-203ENST00000369774 TANGO6Q9C0B7 1094 aa15.51■□□□□ 0.07
SH3PXD2A-203ENST00000369774 KIF7Q2M1P5 1343 aa15.51■□□□□ 0.07
SH3PXD2A-203ENST00000369774 MPHOSPH8Q99549 860 aa15.51■□□□□ 0.07
SH3PXD2A-203ENST00000369774 CCP110O43303 1012 aa15.51■□□□□ 0.07
SH3PXD2A-203ENST00000369774 MPHOSPH10O00566 681 aaKnown RBP15.5■□□□□ 0.07
SH3PXD2A-203ENST00000369774 IBSPP21815 317 aaPredicted RBP15.5■□□□□ 0.07
SH3PXD2A-203ENST00000369774 PROSER2Q86WR7 435 aaPredicted RBP15.5■□□□□ 0.07
SH3PXD2A-203ENST00000369774 TRIM22Q8IYM9 498 aa15.5■□□□□ 0.07
SH3PXD2A-203ENST00000369774 MYL6BP14649 208 aa15.5■□□□□ 0.07
SH3PXD2A-203ENST00000369774 SERPINC1P01008 464 aa15.5■□□□□ 0.07
SH3PXD2A-203ENST00000369774 NUP133Q8WUM0 1156 aa15.5■□□□□ 0.07
SH3PXD2A-203ENST00000369774 NACAP1Q9BZK3 213 aa15.5■□□□□ 0.07
SH3PXD2A-203ENST00000369774 PLCD4Q9BRC7 762 aa15.5■□□□□ 0.07
SH3PXD2A-203ENST00000369774 TOM1L2Q6ZVM7 507 aa15.5■□□□□ 0.07
SH3PXD2A-203ENST00000369774 CT47B1P0C2W7 299 aaPredicted RBP15.49■□□□□ 0.07
SH3PXD2A-203ENST00000369774 PIP4K2AP48426 406 aaPredicted RBP15.49■□□□□ 0.07
SH3PXD2A-203ENST00000369774 SOGA3Q5TF21 947 aa15.49■□□□□ 0.07
SH3PXD2A-203ENST00000369774 JMYQ8N9B5 988 aa15.49■□□□□ 0.07
SH3PXD2A-203ENST00000369774 MAP4K4O95819 1239 aaPredicted RBP15.49■□□□□ 0.07
SH3PXD2A-203ENST00000369774 AAMPQ13685 434 aa15.49■□□□□ 0.07
SH3PXD2A-203ENST00000369774 PPFIBP1Q86W92 1011 aa15.49■□□□□ 0.07
SH3PXD2A-203ENST00000369774 ZSCAN29Q8IWY8 852 aaPredicted RBP15.49■□□□□ 0.07
SH3PXD2A-203ENST00000369774 LUC7LQ9NQ29 371 aaKnown RBP15.49■□□□□ 0.07
SH3PXD2A-203ENST00000369774 GOLGA6L10A6NI86 522 aa15.49■□□□□ 0.07
SH3PXD2A-203ENST00000369774 PRPF40AO75400 957 aaKnown RBP15.49■□□□□ 0.07
SH3PXD2A-203ENST00000369774 ARHGAP5Q13017 1502 aa15.49■□□□□ 0.07
SH3PXD2A-203ENST00000369774 MCM2P49736 904 aa15.49■□□□□ 0.07
SH3PXD2A-203ENST00000369774 TXNDC2Q86VQ3 553 aa15.48■□□□□ 0.07
SH3PXD2A-203ENST00000369774 ENOX2Q16206 610 aaKnown RBP15.48■□□□□ 0.07
SH3PXD2A-203ENST00000369774 SEPT11Q9NVA2 429 aaKnown RBP15.48■□□□□ 0.07
SH3PXD2A-203ENST00000369774 MYOM3Q5VTT5 1437 aa15.48■□□□□ 0.07
SH3PXD2A-203ENST00000369774 PRKAR2BP31323 418 aa15.48■□□□□ 0.07
SH3PXD2A-203ENST00000369774 CCDC57Q2TAC2 916 aa15.48■□□□□ 0.07
SH3PXD2A-203ENST00000369774 HDGFL1Q5TGJ6 251 aa15.48■□□□□ 0.07
SH3PXD2A-203ENST00000369774 FKBP4Q02790 459 aaKnown RBP eCLIP15.48■□□□□ 0.071e-8■□□□□ 10.7
SH3PXD2A-203ENST00000369774 MBD3O95983 291 aa15.47■□□□□ 0.07
SH3PXD2A-203ENST00000369774 SSBP05455 408 aaKnown RBP eCLIP15.47■□□□□ 0.07
SH3PXD2A-203ENST00000369774 ANKRD18AQ8IVF6 992 aa15.47■□□□□ 0.07
SH3PXD2A-203ENST00000369774 FANCD2Q9BXW9 1451 aa15.47■□□□□ 0.07
SH3PXD2A-203ENST00000369774 TRAK2O60296 914 aa15.47■□□□□ 0.07
SH3PXD2A-203ENST00000369774 NOB1Q9ULX3 412 aaKnown RBP15.47■□□□□ 0.07
SH3PXD2A-203ENST00000369774 ME1P48163 572 aa15.47■□□□□ 0.07
SH3PXD2A-203ENST00000369774 TWISTNBQ3B726 338 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms