RNA–Protein interactions for RNA: ENST00000369729.7

SFR1-202, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFR1, Length 1,503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-202ENST00000369729 CLEC11AQ9Y240 323 aa12.04□□□□□ -0.48
SFR1-202ENST00000369729 LRRC7Q96NW7 1537 aa12.04□□□□□ -0.48
SFR1-202ENST00000369729 CGNL1Q0VF96 1302 aa12.04□□□□□ -0.48
SFR1-202ENST00000369729 NUTM2FA1L443 756 aa12.03□□□□□ -0.48
SFR1-202ENST00000369729 NALCNQ8IZF0 1738 aa12.03□□□□□ -0.48
SFR1-202ENST00000369729 ITSN1Q15811 1721 aa12.02□□□□□ -0.49
SFR1-202ENST00000369729 FMN2Q9NZ56 1722 aa12.02□□□□□ -0.49
SFR1-202ENST00000369729 MYOM1P52179 1685 aa12.02□□□□□ -0.49
SFR1-202ENST00000369729 RALBP1Q15311 655 aa12.01□□□□□ -0.49
SFR1-202ENST00000369729 ESCO1Q5FWF5 840 aa12.01□□□□□ -0.49
SFR1-202ENST00000369729 PHF8Q9UPP1 1060 aa12.01□□□□□ -0.49
SFR1-202ENST00000369729 PRR36Q9H6K5 1346 aa12.01□□□□□ -0.49
SFR1-202ENST00000369729 STRCP1A6NGW2 1772 aa12.01□□□□□ -0.49
SFR1-202ENST00000369729 BRD4O60885 1362 aaPredicted RBP12.01□□□□□ -0.49
SFR1-202ENST00000369729 NSD2O96028 1365 aa12.01□□□□□ -0.49
SFR1-202ENST00000369729 NPC1L1Q9UHC9 1359 aa12.01□□□□□ -0.49
SFR1-202ENST00000369729 PER1O15534 1290 aaPredicted RBP12.01□□□□□ -0.49
SFR1-202ENST00000369729 SPDYE1Q8NFV5 336 aaPredicted RBP12.01□□□□□ -0.49
SFR1-202ENST00000369729 ACEP12821 1306 aa12□□□□□ -0.49
SFR1-202ENST00000369729 A0A1W2PP64 1363 aa12□□□□□ -0.49
SFR1-202ENST00000369729 NSD3Q9BZ95 1437 aa12□□□□□ -0.49
SFR1-202ENST00000369729 SSUH2Q9Y2M2 353 aa12□□□□□ -0.49
SFR1-202ENST00000369729 EDC4Q6P2E9 1401 aaKnown RBP11.99□□□□□ -0.49
SFR1-202ENST00000369729 CPSF1Q10570 1443 aaKnown RBP11.98□□□□□ -0.49
SFR1-202ENST00000369729 C19orf67A6NJJ6 358 aa11.98□□□□□ -0.49
SFR1-202ENST00000369729 PSME1Q06323 249 aa11.98□□□□□ -0.49
SFR1-202ENST00000369729 PMFBP1Q8TBY8 1022 aa11.98□□□□□ -0.49
SFR1-202ENST00000369729 PRKRIP1Q9H875 184 aaPredicted RBP11.98□□□□□ -0.49
SFR1-202ENST00000369729 POLR3AO14802 1390 aaPredicted RBP11.98□□□□□ -0.49
SFR1-202ENST00000369729 C1orf167Q5SNV9 1468 aa11.98□□□□□ -0.49
SFR1-202ENST00000369729 CARD14Q9BXL6 1004 aa11.97□□□□□ -0.49
SFR1-202ENST00000369729 SLAIN2Q9P270 581 aa11.97□□□□□ -0.49
SFR1-202ENST00000369729 TTC21AQ8NDW8 1320 aa11.97□□□□□ -0.49
SFR1-202ENST00000369729 TOPAZ1Q8N9V7 1692 aa11.97□□□□□ -0.49
SFR1-202ENST00000369729 AMER1Q5JTC6 1135 aaPredicted RBP11.96□□□□□ -0.49
SFR1-202ENST00000369729 CC2D1BQ5T0F9 858 aaKnown RBP11.96□□□□□ -0.49
SFR1-202ENST00000369729 MORC1Q86VD1 984 aa11.96□□□□□ -0.49
SFR1-202ENST00000369729 MST1RQ04912 1400 aa11.96□□□□□ -0.49
SFR1-202ENST00000369729 CCER2I3L3R5 266 aa11.96□□□□□ -0.5
SFR1-202ENST00000369729 CNGB1Q14028 1251 aaPredicted RBP11.96□□□□□ -0.5
SFR1-202ENST00000369729 MIER1Q8N108 512 aa11.96□□□□□ -0.5
SFR1-202ENST00000369729 NPHP3Q7Z494 1330 aa11.96□□□□□ -0.5
SFR1-202ENST00000369729 CD163L1Q9NR16 1453 aa11.95□□□□□ -0.5
SFR1-202ENST00000369729 LTBP4Q8N2S1 1624 aa11.95□□□□□ -0.5
SFR1-202ENST00000369729 USP32Q8NFA0 1604 aa11.95□□□□□ -0.5
SFR1-202ENST00000369729 KIF1AQ12756 1690 aa11.95□□□□□ -0.5
SFR1-202ENST00000369729 TOM1O60784 492 aa11.95□□□□□ -0.5
SFR1-202ENST00000369729 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.95□□□□□ -0.5
SFR1-202ENST00000369729 USP6P35125 1406 aa11.95□□□□□ -0.5
SFR1-202ENST00000369729 TTC21BQ7Z4L5 1316 aa11.94□□□□□ -0.5
SFR1-202ENST00000369729 COG3Q96JB2 828 aa11.94□□□□□ -0.5
SFR1-202ENST00000369729 ORAI2Q96SN7 254 aa11.94□□□□□ -0.5
SFR1-202ENST00000369729 MYBBP1AQ9BQG0 1328 aaKnown RBP11.94□□□□□ -0.5
SFR1-202ENST00000369729 IQSEC2Q5JU85 1478 aa11.93□□□□□ -0.5
SFR1-202ENST00000369729 PARD3Q8TEW0 1356 aa11.93□□□□□ -0.5
SFR1-202ENST00000369729 PAK3O75914 559 aaPredicted RBP11.93□□□□□ -0.5
SFR1-202ENST00000369729 FYB1O15117 783 aa11.92□□□□□ -0.5
SFR1-202ENST00000369729 FOXO3O43524 673 aa11.92□□□□□ -0.5
SFR1-202ENST00000369729 XIRP1Q702N8 1843 aaKnown RBP11.92□□□□□ -0.5
SFR1-202ENST00000369729 AKAP12Q02952 1782 aa11.92□□□□□ -0.5
SFR1-202ENST00000369729 MON2Q7Z3U7 1717 aa11.91□□□□□ -0.5
SFR1-202ENST00000369729 KRT28Q7Z3Y7 464 aa11.91□□□□□ -0.5
SFR1-202ENST00000369729 NLRP13Q86W25 1043 aa11.91□□□□□ -0.5
SFR1-202ENST00000369729 RGPD8O14715 1765 aaPredicted RBP11.91□□□□□ -0.5
SFR1-202ENST00000369729 CHADLQ6NUI6 762 aa11.91□□□□□ -0.5
SFR1-202ENST00000369729 ABTB2Q8N961 1025 aa11.91□□□□□ -0.5
SFR1-202ENST00000369729 GGNBP2Q9H3C7 697 aa11.91□□□□□ -0.5
SFR1-202ENST00000369729 BRINP3Q76B58 766 aa11.9□□□□□ -0.5
SFR1-202ENST00000369729 GABBR2O75899 941 aa11.89□□□□□ -0.51
SFR1-202ENST00000369729 CFAP53Q96M91 514 aa11.89□□□□□ -0.51
SFR1-202ENST00000369729 SSH2Q76I76 1423 aa11.89□□□□□ -0.51
SFR1-202ENST00000369729 NLRP6P59044 892 aa11.88□□□□□ -0.51
SFR1-202ENST00000369729 NME9Q86XW9 330 aa11.88□□□□□ -0.51
SFR1-202ENST00000369729 CERKQ8TCT0 537 aa11.88□□□□□ -0.51
SFR1-202ENST00000369729 MRS2Q9HD23 443 aa11.88□□□□□ -0.51
SFR1-202ENST00000369729 SBNO1A3KN83 1393 aa11.88□□□□□ -0.51
SFR1-202ENST00000369729 USP31Q70CQ4 1352 aa11.88□□□□□ -0.51
SFR1-202ENST00000369729 UBAP1LF5GYI3 381 aa11.87□□□□□ -0.51
SFR1-202ENST00000369729 PPP2R1AP30153 589 aa11.87□□□□□ -0.51
SFR1-202ENST00000369729 LMOD2Q6P5Q4 547 aa11.87□□□□□ -0.51
SFR1-202ENST00000369729 ARHGEF10O15013 1369 aa11.87□□□□□ -0.51
SFR1-202ENST00000369729 KIF20BQ96Q89 1820 aa11.87□□□□□ -0.51
SFR1-202ENST00000369729 TNNT2P45379 298 aaPredicted RBP11.86□□□□□ -0.51
SFR1-202ENST00000369729 KCNH5Q8NCM2 988 aa11.86□□□□□ -0.51
SFR1-202ENST00000369729 NRKQ7Z2Y5 1582 aa11.86□□□□□ -0.51
SFR1-202ENST00000369729 XPCQ01831 940 aaPredicted RBP11.85□□□□□ -0.51
SFR1-202ENST00000369729 ANKRD26Q9UPS8 1709 aa11.85□□□□□ -0.51
SFR1-202ENST00000369729 AATKQ6ZMQ8 1374 aa11.85□□□□□ -0.51
SFR1-202ENST00000369729 SOS2Q07890 1332 aaPredicted RBP11.84□□□□□ -0.51
SFR1-202ENST00000369729 LRRC59Q96AG4 307 aaKnown RBP11.84□□□□□ -0.51
SFR1-202ENST00000369729 OVOS2A0A0J9YW53 1432 aa11.83□□□□□ -0.51
SFR1-202ENST00000369729 TNS3Q68CZ2 1445 aa11.83□□□□□ -0.51
SFR1-202ENST00000369729 OVOS2Q6IE36 1432 aa11.83□□□□□ -0.51
SFR1-202ENST00000369729 NUDCQ9Y266 331 aa11.83□□□□□ -0.52
SFR1-202ENST00000369729 SPATA31A3Q5VYP0 1347 aa11.83□□□□□ -0.52
SFR1-202ENST00000369729 MTHFSP49914 203 aa11.82□□□□□ -0.52
SFR1-202ENST00000369729 PIP4K2BP78356 416 aa11.82□□□□□ -0.52
SFR1-202ENST00000369729 WDR43Q15061 677 aaKnown RBP eCLIP11.82□□□□□ -0.52
SFR1-202ENST00000369729 PXDNQ92626 1479 aa11.82□□□□□ -0.52
SFR1-202ENST00000369729 HAP1P54257 671 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms