RNA–Protein interactions for RNA: ENST00000369727.3

SFR1-201, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SFR1, Length 1,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-201ENST00000369727 LOC105371045A0A1W2PR82 267 aa11.88□□□□□ -0.51
SFR1-201ENST00000369727 NKX2-3Q8TAU0 364 aa11.88□□□□□ -0.51
SFR1-201ENST00000369727 PCDHB3Q9Y5E6 796 aa11.88□□□□□ -0.51
SFR1-201ENST00000369727 MTUS2Q5JR59 1369 aa11.88□□□□□ -0.51
SFR1-201ENST00000369727 YEATS2Q9ULM3 1422 aa11.88□□□□□ -0.51
SFR1-201ENST00000369727 KDM5CP41229 1560 aa11.88□□□□□ -0.51
SFR1-201ENST00000369727 CFHP08603 1231 aa11.87□□□□□ -0.51
SFR1-201ENST00000369727 SLC10A3P09131 477 aa11.87□□□□□ -0.51
SFR1-201ENST00000369727 ARID4BQ4LE39 1312 aaPredicted RBP11.87□□□□□ -0.51
SFR1-201ENST00000369727 ABCC1P33527 1531 aa11.86□□□□□ -0.51
SFR1-201ENST00000369727 GPATCH8Q9UKJ3 1502 aaKnown RBP11.86□□□□□ -0.51
SFR1-201ENST00000369727 EHBP1L1Q8N3D4 1523 aa11.86□□□□□ -0.51
SFR1-201ENST00000369727 ATP10AO60312 1499 aa11.86□□□□□ -0.51
SFR1-201ENST00000369727 TULP1O00294 542 aaPredicted RBP11.86□□□□□ -0.51
SFR1-201ENST00000369727 KMT5BQ4FZB7 885 aa11.86□□□□□ -0.51
SFR1-201ENST00000369727 PPP1R18Q6NYC8 613 aa11.86□□□□□ -0.51
SFR1-201ENST00000369727 BLOC1S3Q6QNY0 202 aa11.86□□□□□ -0.51
SFR1-201ENST00000369727 ITSN2Q9NZM3 1697 aa11.85□□□□□ -0.51
SFR1-201ENST00000369727 ACTN4O43707 911 aaKnown RBP11.85□□□□□ -0.51
SFR1-201ENST00000369727 AFAP1Q8N556 730 aa11.85□□□□□ -0.51
SFR1-201ENST00000369727 NLRP7Q8WX94 980 aa11.85□□□□□ -0.51
SFR1-201ENST00000369727 HECW2Q9P2P5 1572 aa11.84□□□□□ -0.51
SFR1-201ENST00000369727 PTPRMP28827 1452 aa11.84□□□□□ -0.51
SFR1-201ENST00000369727 MLH3Q9UHC1 1453 aa11.84□□□□□ -0.51
SFR1-201ENST00000369727 C9orf84Q5VXU9 1444 aa11.84□□□□□ -0.51
SFR1-201ENST00000369727 VPS8Q8N3P4 1428 aa11.84□□□□□ -0.51
SFR1-201ENST00000369727 CCNB3Q8WWL7 1395 aa11.84□□□□□ -0.51
SFR1-201ENST00000369727 ZPR1O75312 459 aa11.84□□□□□ -0.51
SFR1-201ENST00000369727 IRX2Q9BZI1 471 aaPredicted RBP11.84□□□□□ -0.51
SFR1-201ENST00000369727 MADDQ8WXG6 1647 aa11.84□□□□□ -0.51
SFR1-201ENST00000369727 ARHGEF12Q9NZN5 1544 aa11.83□□□□□ -0.51
SFR1-201ENST00000369727 SIGLEC1Q9BZZ2 1709 aa11.83□□□□□ -0.52
SFR1-201ENST00000369727 SAMD9LQ8IVG5 1584 aa11.83□□□□□ -0.52
SFR1-201ENST00000369727 PLEKHH2Q8IVE3 1493 aa11.83□□□□□ -0.52
SFR1-201ENST00000369727 TRAPPC8Q9Y2L5 1435 aa11.82□□□□□ -0.52
SFR1-201ENST00000369727 PHOX2BQ99453 314 aa11.82□□□□□ -0.52
SFR1-201ENST00000369727 CFDP1Q9UEE9 299 aaPredicted RBP11.82□□□□□ -0.52
SFR1-201ENST00000369727 KIAA1107Q9UPP5 1409 aa11.82□□□□□ -0.52
SFR1-201ENST00000369727 TIAM1Q13009 1591 aa11.81□□□□□ -0.52
SFR1-201ENST00000369727 REREQ9P2R6 1566 aa11.81□□□□□ -0.52
SFR1-201ENST00000369727 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.81□□□□□ -0.52
SFR1-201ENST00000369727 ZNF777Q9ULD5 760 aaPredicted RBP11.81□□□□□ -0.52
SFR1-201ENST00000369727 DIP2CQ9Y2E4 1556 aa11.81□□□□□ -0.52
SFR1-201ENST00000369727 DAXXQ9UER7 740 aaPredicted RBP11.8□□□□□ -0.52
SFR1-201ENST00000369727 SYCP2Q9BX26 1530 aa11.8□□□□□ -0.52
SFR1-201ENST00000369727 RIMS1Q86UR5 1692 aaKnown RBP11.8□□□□□ -0.52
SFR1-201ENST00000369727 ABCA6Q8N139 1617 aa11.79□□□□□ -0.52
SFR1-201ENST00000369727 RSPH4AQ5TD94 716 aa11.79□□□□□ -0.52
SFR1-201ENST00000369727 SUPT6HQ7KZ85 1726 aaKnown RBP11.79□□□□□ -0.52
SFR1-201ENST00000369727 MAP3K1Q13233 1512 aa11.79□□□□□ -0.52
SFR1-201ENST00000369727 KIDINS220Q9ULH0 1771 aa11.79□□□□□ -0.52
SFR1-201ENST00000369727 FER1L4A9Z1Z3 1794 aa11.78□□□□□ -0.52
SFR1-201ENST00000369727 NCOA2Q15596 1464 aa11.77□□□□□ -0.53
SFR1-201ENST00000369727 AGLP35573 1532 aa11.77□□□□□ -0.53
SFR1-201ENST00000369727 DDX11L8A8MPP1 907 aa11.77□□□□□ -0.53
SFR1-201ENST00000369727 TLL1O43897 1013 aa11.77□□□□□ -0.53
SFR1-201ENST00000369727 HNRNPMP52272 730 aaKnown RBP eCLIP11.77□□□□□ -0.53
SFR1-201ENST00000369727 RDH13Q8NBN7 331 aa11.77□□□□□ -0.53
SFR1-201ENST00000369727 PRKD2Q9BZL6 878 aa11.77□□□□□ -0.53
SFR1-201ENST00000369727 SPAG9O60271 1321 aaKnown RBP11.76□□□□□ -0.53
SFR1-201ENST00000369727 GGCXP38435 758 aa11.76□□□□□ -0.53
SFR1-201ENST00000369727 MAP2K5Q13163 448 aa11.76□□□□□ -0.53
SFR1-201ENST00000369727 MLECQ14165 292 aa11.76□□□□□ -0.53
SFR1-201ENST00000369727 LRRC9Q6ZRR7 1453 aa11.76□□□□□ -0.53
SFR1-201ENST00000369727 ATP7AQ04656 1500 aa11.74□□□□□ -0.53
SFR1-201ENST00000369727 INO80Q9ULG1 1556 aaPredicted RBP11.74□□□□□ -0.53
SFR1-201ENST00000369727 PUS10Q3MIT2 529 aaKnown RBP11.74□□□□□ -0.53
SFR1-201ENST00000369727 ZNF644Q9H582 1327 aaPredicted RBP11.74□□□□□ -0.53
SFR1-201ENST00000369727 MBD5Q9P267 1494 aa11.73□□□□□ -0.53
SFR1-201ENST00000369727 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.73□□□□□ -0.53
SFR1-201ENST00000369727 NR1I2O75469 434 aa11.72□□□□□ -0.53
SFR1-201ENST00000369727 TMUB1Q9BVT8 246 aa11.72□□□□□ -0.53
SFR1-201ENST00000369727 IRF6O14896 467 aa11.71□□□□□ -0.53
SFR1-201ENST00000369727 SULF1Q8IWU6 871 aa11.71□□□□□ -0.53
SFR1-201ENST00000369727 CAMSAP2Q08AD1 1489 aa11.71□□□□□ -0.53
SFR1-201ENST00000369727 RTEL1-TNFRSF6BF6WH68 1400 aa11.7□□□□□ -0.54
SFR1-201ENST00000369727 KANK4Q5T7N3 995 aaPredicted RBP11.7□□□□□ -0.54
SFR1-201ENST00000369727 SCUBE3Q8IX30 993 aa11.7□□□□□ -0.54
SFR1-201ENST00000369727 SETD1BQ9UPS6 1966 aaKnown RBP11.7□□□□□ -0.54
SFR1-201ENST00000369727 V9GY48 417 aaPredicted RBP11.69□□□□□ -0.54
SFR1-201ENST00000369727 A2MP01023 1474 aa11.69□□□□□ -0.54
SFR1-201ENST00000369727 CCDC141Q6ZP82 1450 aa11.69□□□□□ -0.54
SFR1-201ENST00000369727 LMTK3Q96Q04 1460 aa11.69□□□□□ -0.54
SFR1-201ENST00000369727 ADGBQ8N7X0 1667 aa11.69□□□□□ -0.54
SFR1-201ENST00000369727 MINK1Q8N4C8 1332 aaPredicted RBP11.69□□□□□ -0.54
SFR1-201ENST00000369727 PLXNC1O60486 1568 aa11.69□□□□□ -0.54
SFR1-201ENST00000369727 RNF223E7ERA6 249 aa11.69□□□□□ -0.54
SFR1-201ENST00000369727 ARHGEF5Q12774 1597 aa11.68□□□□□ -0.54
SFR1-201ENST00000369727 MIA2Q96PC5 1412 aa11.68□□□□□ -0.54
SFR1-201ENST00000369727 CNTLNQ9NXG0 1405 aa11.68□□□□□ -0.54
SFR1-201ENST00000369727 S1PR4O95977 384 aa11.68□□□□□ -0.54
SFR1-201ENST00000369727 ADH1BP00325 375 aa11.68□□□□□ -0.54
SFR1-201ENST00000369727 GCGRP47871 477 aa11.68□□□□□ -0.54
SFR1-201ENST00000369727 FUT2Q10981 343 aa11.68□□□□□ -0.54
SFR1-201ENST00000369727 LMOD2Q6P5Q4 547 aa11.68□□□□□ -0.54
SFR1-201ENST00000369727 ESF1Q9H501 851 aaKnown RBP11.68□□□□□ -0.54
SFR1-201ENST00000369727 MYOM3Q5VTT5 1437 aa11.67□□□□□ -0.54
SFR1-201ENST00000369727 CCDC102AQ96A19 550 aa11.67□□□□□ -0.54
SFR1-201ENST00000369727 PPEF1O14829 653 aaPredicted RBP11.66□□□□□ -0.54
SFR1-201ENST00000369727 MROH2AA6NES4 1674 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms