RNA–Protein interactions for RNA: ENST00000369559.8

HIPK1-206, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-206ENST00000369559 ZNF518AQ6AHZ1 1483 aa12.5□□□□□ -0.41
HIPK1-206ENST00000369559 ZNF500O60304 480 aaPredicted RBP12.5□□□□□ -0.41
HIPK1-206ENST00000369559 ZNF445P59923 1031 aa12.5□□□□□ -0.41
HIPK1-206ENST00000369559 ATF7IPQ6VMQ6 1270 aa12.5□□□□□ -0.41
HIPK1-206ENST00000369559 NOL7Q9UMY1 257 aaKnown RBP12.5□□□□□ -0.41
HIPK1-206ENST00000369559 DIP2BQ9P265 1576 aa12.5□□□□□ -0.41
HIPK1-206ENST00000369559 ARHGAP31Q2M1Z3 1444 aa12.5□□□□□ -0.41
HIPK1-206ENST00000369559 BAG4O95429 457 aaKnown RBP12.5□□□□□ -0.41
HIPK1-206ENST00000369559 BMP2KLQ5H9B9 411 aa12.5□□□□□ -0.41
HIPK1-206ENST00000369559 PTPRTO14522 1441 aa12.49□□□□□ -0.41
HIPK1-206ENST00000369559 LNPKQ9C0E8 428 aa12.49□□□□□ -0.41
HIPK1-206ENST00000369559 PLCH2O75038 1416 aa12.49□□□□□ -0.41
HIPK1-206ENST00000369559 EFCAB2Q5VUJ9 269 aa12.49□□□□□ -0.41
HIPK1-206ENST00000369559 CFAP53Q96M91 514 aa12.49□□□□□ -0.41
HIPK1-206ENST00000369559 ZBTB40Q9NUA8 1239 aa12.49□□□□□ -0.41
HIPK1-206ENST00000369559 CFAP74Q9C0B2 1584 aa12.49□□□□□ -0.41
HIPK1-206ENST00000369559 GAS2L2Q8NHY3 880 aa12.49□□□□□ -0.41
HIPK1-206ENST00000369559 TSR2Q969E8 191 aaKnown RBP12.49□□□□□ -0.41
HIPK1-206ENST00000369559 ABCA9Q8IUA7 1624 aa12.48□□□□□ -0.41
HIPK1-206ENST00000369559 ADGRB2O60241 1585 aa12.48□□□□□ -0.41
HIPK1-206ENST00000369559 ADGRL1O94910 1474 aa12.48□□□□□ -0.41
HIPK1-206ENST00000369559 CHD1LQ86WJ1 897 aa12.48□□□□□ -0.41
HIPK1-206ENST00000369559 SSH1Q8WYL5 1049 aa12.48□□□□□ -0.41
HIPK1-206ENST00000369559 MTHFSP49914 203 aa12.48□□□□□ -0.41
HIPK1-206ENST00000369559 CFAP70Q5T0N1 1121 aa12.48□□□□□ -0.41
HIPK1-206ENST00000369559 SBNO2Q9Y2G9 1366 aa12.48□□□□□ -0.41
HIPK1-206ENST00000369559 MYO3AQ8NEV4 1616 aa12.47□□□□□ -0.41
HIPK1-206ENST00000369559 UQCRHLA0A096LP55 91 aa12.47□□□□□ -0.41
HIPK1-206ENST00000369559 UQCRHP07919 91 aa12.47□□□□□ -0.41
HIPK1-206ENST00000369559 EXOSC9Q06265 439 aaKnown RBP12.47□□□□□ -0.41
HIPK1-206ENST00000369559 MTERF4Q7Z6M4 381 aaKnown RBP12.47□□□□□ -0.41
HIPK1-206ENST00000369559 TMEM57Q8N5G2 664 aa12.47□□□□□ -0.41
HIPK1-206ENST00000369559 PDLIM2Q96JY6 352 aa12.47□□□□□ -0.41
HIPK1-206ENST00000369559 ABCA6Q8N139 1617 aa12.47□□□□□ -0.41
HIPK1-206ENST00000369559 PODXL2Q9NZ53 605 aa12.47□□□□□ -0.41
HIPK1-206ENST00000369559 MAP3K4Q9Y6R4 1608 aa12.47□□□□□ -0.41
HIPK1-206ENST00000369559 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.47□□□□□ -0.41
HIPK1-206ENST00000369559 NOB1Q9ULX3 412 aaKnown RBP12.47□□□□□ -0.41
HIPK1-206ENST00000369559 KIF16BQ96L93 1317 aa12.47□□□□□ -0.41
HIPK1-206ENST00000369559 ZSCAN23Q3MJ62 389 aa12.46□□□□□ -0.41
HIPK1-206ENST00000369559 RBM42Q9BTD8 480 aaKnown RBP12.46□□□□□ -0.41
HIPK1-206ENST00000369559 XPCQ01831 940 aaPredicted RBP12.46□□□□□ -0.41
HIPK1-206ENST00000369559 CAVIN1Q6NZI2 390 aaKnown RBP12.46□□□□□ -0.42
HIPK1-206ENST00000369559 GLI2P10070 1586 aa12.46□□□□□ -0.42
HIPK1-206ENST00000369559 FANCAO15360 1455 aa12.45□□□□□ -0.42
HIPK1-206ENST00000369559 DYNC1I1O14576 645 aa12.45□□□□□ -0.42
HIPK1-206ENST00000369559 CSPP1Q1MSJ5 1256 aa12.45□□□□□ -0.42
HIPK1-206ENST00000369559 SMAP1Q8IYB5 467 aaPredicted RBP12.45□□□□□ -0.42
HIPK1-206ENST00000369559 TSPOAP1O95153 1857 aa12.45□□□□□ -0.42
HIPK1-206ENST00000369559 MYOM2P54296 1465 aa12.45□□□□□ -0.42
HIPK1-206ENST00000369559 USP32Q8NFA0 1604 aa12.45□□□□□ -0.42
HIPK1-206ENST00000369559 U2AF1L5P0DN76 240 aaPredicted RBP12.45□□□□□ -0.42
HIPK1-206ENST00000369559 U2AF1Q01081 240 aaKnown RBP eCLIP12.45□□□□□ -0.42
HIPK1-206ENST00000369559 MCTP1Q6DN14 999 aa12.45□□□□□ -0.42
HIPK1-206ENST00000369559 TBC1D9Q6ZT07 1266 aa12.45□□□□□ -0.42
HIPK1-206ENST00000369559 RBSNQ9H1K0 784 aa12.45□□□□□ -0.42
HIPK1-206ENST00000369559 NOS1P29475 1434 aa12.45□□□□□ -0.42
HIPK1-206ENST00000369559 NEURL4Q96JN8 1562 aa12.45□□□□□ -0.42
HIPK1-206ENST00000369559 ZKSCAN5Q9Y2L8 839 aa12.44□□□□□ -0.42
HIPK1-206ENST00000369559 ABCC11Q96J66 1382 aa12.44□□□□□ -0.42
HIPK1-206ENST00000369559 AK9Q5TCS8 1911 aa12.44□□□□□ -0.42
HIPK1-206ENST00000369559 NCLP19338 710 aaKnown RBP12.44□□□□□ -0.42
HIPK1-206ENST00000369559 KIF13AQ9H1H9 1805 aa12.44□□□□□ -0.42
HIPK1-206ENST00000369559 MCM5P33992 734 aa12.44□□□□□ -0.42
HIPK1-206ENST00000369559 NUCB2P80303 420 aa12.43□□□□□ -0.42
HIPK1-206ENST00000369559 IPO8O15397 1037 aaKnown RBP12.43□□□□□ -0.42
HIPK1-206ENST00000369559 SLC12A5Q9H2X9 1139 aa12.43□□□□□ -0.42
HIPK1-206ENST00000369559 LMBRD1Q9NUN5 540 aa12.43□□□□□ -0.42
HIPK1-206ENST00000369559 ADGRF5Q8IZF2 1346 aa12.42□□□□□ -0.42
HIPK1-206ENST00000369559 TET3O43151 1660 aa12.42□□□□□ -0.42
HIPK1-206ENST00000369559 PRIM1P49642 420 aaKnown RBP12.42□□□□□ -0.42
HIPK1-206ENST00000369559 ANKRD45Q5TZF3 282 aa12.42□□□□□ -0.42
HIPK1-206ENST00000369559 GCC1Q96CN9 775 aa12.42□□□□□ -0.42
HIPK1-206ENST00000369559 CYP2E1P05181 493 aaPredicted RBP12.41□□□□□ -0.42
HIPK1-206ENST00000369559 SASS6Q6UVJ0 657 aa12.41□□□□□ -0.42
HIPK1-206ENST00000369559 AFAP1Q8N556 730 aa12.4□□□□□ -0.42
HIPK1-206ENST00000369559 IL16Q14005 1332 aa12.4□□□□□ -0.42
HIPK1-206ENST00000369559 TMPOP42166 694 aaKnown RBP12.4□□□□□ -0.42
HIPK1-206ENST00000369559 RABEP1Q15276 862 aa12.4□□□□□ -0.42
HIPK1-206ENST00000369559 CCDC39Q9UFE4 941 aa12.4□□□□□ -0.42
HIPK1-206ENST00000369559 TRIM35Q9UPQ4 493 aa12.4□□□□□ -0.42
HIPK1-206ENST00000369559 REREQ9P2R6 1566 aa12.4□□□□□ -0.42
HIPK1-206ENST00000369559 DEPDC5O75140 1603 aa12.4□□□□□ -0.43
HIPK1-206ENST00000369559 PPIP5K1Q6PFW1 1433 aa12.39□□□□□ -0.43
HIPK1-206ENST00000369559 CDC45O75419 566 aa12.39□□□□□ -0.43
HIPK1-206ENST00000369559 RAPGEF3O95398 923 aa12.39□□□□□ -0.43
HIPK1-206ENST00000369559 MED14O60244 1454 aa12.39□□□□□ -0.43
HIPK1-206ENST00000369559 INO80Q9ULG1 1556 aaPredicted RBP12.39□□□□□ -0.43
HIPK1-206ENST00000369559 ZC3H13Q5T200 1668 aaKnown RBP12.39□□□□□ -0.43
HIPK1-206ENST00000369559 IFT172Q9UG01 1749 aa12.39□□□□□ -0.43
HIPK1-206ENST00000369559 ARAP3Q8WWN8 1544 aa12.39□□□□□ -0.43
HIPK1-206ENST00000369559 PPRC1Q5VV67 1664 aaKnown RBP12.39□□□□□ -0.43
HIPK1-206ENST00000369559 PLEKHF1Q96S99 279 aa12.39□□□□□ -0.43
HIPK1-206ENST00000369559 ARID3AQ99856 593 aa12.39□□□□□ -0.43
HIPK1-206ENST00000369559 ALDH1L2Q3SY69 923 aa12.38□□□□□ -0.43
HIPK1-206ENST00000369559 ABCC1P33527 1531 aa12.38□□□□□ -0.43
HIPK1-206ENST00000369559 LRSAM1Q6UWE0 723 aa12.38□□□□□ -0.43
HIPK1-206ENST00000369559 GPT2Q8TD30 523 aa12.38□□□□□ -0.43
HIPK1-206ENST00000369559 QRICH2Q9H0J4 1663 aa12.38□□□□□ -0.43
HIPK1-206ENST00000369559 NSD2O96028 1365 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms